RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 TRAV12-2A0A075B6T6 113 aa14.01□□□□□ -0.17
MSLN-207ENST00000566549 TMEM89A2RUT3 159 aa14.01□□□□□ -0.17
MSLN-207ENST00000566549 KLLNB2CW77 178 aa14.01□□□□□ -0.17
MSLN-207ENST00000566549 SMIM17P0DL12 118 aa14□□□□□ -0.17
MSLN-207ENST00000566549 LAGE3Q14657 143 aa14□□□□□ -0.17
MSLN-207ENST00000566549 FAM159AQ6UWV7 190 aa14□□□□□ -0.17
MSLN-207ENST00000566549 ELANEP08246 267 aa14□□□□□ -0.17
MSLN-207ENST00000566549 HIST2H2BCQ6DN03 193 aa14□□□□□ -0.17
MSLN-207ENST00000566549 FOXC2Q99958 501 aa14□□□□□ -0.17
MSLN-207ENST00000566549 DPH3P1Q9H4G8 78 aa14□□□□□ -0.17
MSLN-207ENST00000566549 SNRPD3P62318 126 aaKnown RBP13.99□□□□□ -0.17
MSLN-207ENST00000566549 RASL10AQ92737 203 aa13.99□□□□□ -0.17
MSLN-207ENST00000566549 MRAP2Q96G30 205 aa13.99□□□□□ -0.17
MSLN-207ENST00000566549 NMUP48645 174 aa13.99□□□□□ -0.17
MSLN-207ENST00000566549 C2orf91Q6ZV80 131 aa13.99□□□□□ -0.17
MSLN-207ENST00000566549 ERASQ7Z444 233 aa13.99□□□□□ -0.17
MSLN-207ENST00000566549 SONP18583 2426 aaKnown RBP13.98□□□□□ -0.17
MSLN-207ENST00000566549 CD7P09564 240 aa13.98□□□□□ -0.17
MSLN-207ENST00000566549 ODF1Q14990 250 aa13.98□□□□□ -0.17
MSLN-207ENST00000566549 BVES-AS1Q5T3Y7 98 aa13.98□□□□□ -0.17
MSLN-207ENST00000566549 DPF1Q92782 380 aa13.98□□□□□ -0.17
MSLN-207ENST00000566549 DUX3Q96PT4 197 aa13.98□□□□□ -0.17
MSLN-207ENST00000566549 JPT2Q9H910 190 aa13.98□□□□□ -0.17
MSLN-207ENST00000566549 CCDC168Q8NDH2 2452 aa13.98□□□□□ -0.17
MSLN-207ENST00000566549 TRBV7-9A0A0J9YWB2 115 aa13.98□□□□□ -0.17
MSLN-207ENST00000566549 SLURP1P55000 103 aa13.98□□□□□ -0.17
MSLN-207ENST00000566549 UBE2E2Q96LR5 201 aa13.98□□□□□ -0.17
MSLN-207ENST00000566549 SMIM2Q9BVW6 85 aa13.98□□□□□ -0.17
MSLN-207ENST00000566549 FGF6P10767 208 aa13.97□□□□□ -0.17
MSLN-207ENST00000566549 KHDC1LQ5JSQ8 128 aa13.97□□□□□ -0.17
MSLN-207ENST00000566549 AP1S3Q96PC3 154 aa13.97□□□□□ -0.17
MSLN-207ENST00000566549 A0A0J9YX75 114 aa13.96□□□□□ -0.17
MSLN-207ENST00000566549 C7orf71A4D174 169 aa13.96□□□□□ -0.17
MSLN-207ENST00000566549 K7EQG2 157 aa13.96□□□□□ -0.17
MSLN-207ENST00000566549 SAMD13Q5VXD3 122 aa13.96□□□□□ -0.17
MSLN-207ENST00000566549 KRTAP1-3Q8IUG1 177 aa13.96□□□□□ -0.17
MSLN-207ENST00000566549 MYOZ3Q8TDC0 251 aa13.96□□□□□ -0.17
MSLN-207ENST00000566549 DEFB104AQ8WTQ1 72 aa13.96□□□□□ -0.17
MSLN-207ENST00000566549 PRRC2AP48634 2157 aaKnown RBP13.96□□□□□ -0.17
MSLN-207ENST00000566549 TENM4Q6N022 2769 aa13.96□□□□□ -0.17
MSLN-207ENST00000566549 SUMO2P61956 95 aaKnown RBP13.96□□□□□ -0.17
MSLN-207ENST00000566549 SPINK13Q1W4C9 94 aa13.96□□□□□ -0.17
MSLN-207ENST00000566549 PCP2Q8IVA1 136 aa13.96□□□□□ -0.17
MSLN-207ENST00000566549 AKAP9Q99996 3911 aa13.96□□□□□ -0.17
MSLN-207ENST00000566549 CUBNO60494 3623 aa13.96□□□□□ -0.17
MSLN-207ENST00000566549 ITPR3Q14573 2671 aa13.95□□□□□ -0.18
MSLN-207ENST00000566549 SORL1Q92673 2214 aa13.95□□□□□ -0.18
MSLN-207ENST00000566549 TCTEX1D4Q5JR98 221 aa13.95□□□□□ -0.18
MSLN-207ENST00000566549 NEGR1Q7Z3B1 354 aa13.95□□□□□ -0.18
MSLN-207ENST00000566549 LRRC75A-AS1Q8N1F1 130 aa13.95□□□□□ -0.18
MSLN-207ENST00000566549 A0A087WWL8 130 aa13.94□□□□□ -0.18
MSLN-207ENST00000566549 MED14OSP0DP75 135 aa13.94□□□□□ -0.18
MSLN-207ENST00000566549 WFDC11Q8NEX6 87 aa13.94□□□□□ -0.18
MSLN-207ENST00000566549 OR1N2Q8NGR9 330 aa13.94□□□□□ -0.18
MSLN-207ENST00000566549 COX11Q9Y6N1 276 aa13.94□□□□□ -0.18
MSLN-207ENST00000566549 C12orf54Q6X4T0 127 aa13.94□□□□□ -0.18
MSLN-207ENST00000566549 ADAMTSL5Q6ZMM2 481 aa13.94□□□□□ -0.18
MSLN-207ENST00000566549 GAGE1Q13065 139 aa13.93□□□□□ -0.18
MSLN-207ENST00000566549 DEFB125Q8N687 156 aa13.93□□□□□ -0.18
MSLN-207ENST00000566549 TTTY13Q9BZ97 58 aa13.93□□□□□ -0.18
MSLN-207ENST00000566549 LGALS9O00182 355 aa13.93□□□□□ -0.18
MSLN-207ENST00000566549 TMEM160Q9NX00 188 aa13.93□□□□□ -0.18
MSLN-207ENST00000566549 MDFICQ9P1T7 246 aa13.93□□□□□ -0.18
MSLN-207ENST00000566549 AGRNO00468 2067 aa13.92□□□□□ -0.18
MSLN-207ENST00000566549 ATP5LO75964 103 aa13.92□□□□□ -0.18
MSLN-207ENST00000566549 IGKCP01834 107 aa13.92□□□□□ -0.18
MSLN-207ENST00000566549 BOD1L2Q8IYS8 172 aa13.92□□□□□ -0.18
MSLN-207ENST00000566549 MRPL35Q9NZE8 188 aaKnown RBP13.92□□□□□ -0.18
MSLN-207ENST00000566549 MUC4Q99102 2169 aa13.92□□□□□ -0.18
MSLN-207ENST00000566549 IGKV2D-26A0A0A0MRZ7 120 aa13.92□□□□□ -0.18
MSLN-207ENST00000566549 GTSCR1Q86UQ5 136 aa13.92□□□□□ -0.18
MSLN-207ENST00000566549 OR11H1Q8NG94 326 aa13.92□□□□□ -0.18
MSLN-207ENST00000566549 FAM74A4Q5TZK3 123 aa13.91□□□□□ -0.18
MSLN-207ENST00000566549 HHLA3Q9XRX5 114 aa13.91□□□□□ -0.18
MSLN-207ENST00000566549 CDKN1BP46527 198 aa13.91□□□□□ -0.18
MSLN-207ENST00000566549 CHD6Q8TD26 2715 aa13.9□□□□□ -0.18
MSLN-207ENST00000566549 F5H697 171 aa13.9□□□□□ -0.18
MSLN-207ENST00000566549 Q8N1Y9 231 aa13.9□□□□□ -0.18
MSLN-207ENST00000566549 RNF152Q8N8N0 203 aa13.9□□□□□ -0.18
MSLN-207ENST00000566549 C20orf78Q9BR46 151 aa13.9□□□□□ -0.18
MSLN-207ENST00000566549 CSTL1Q9H114 145 aa13.9□□□□□ -0.18
MSLN-207ENST00000566549 ZMAT4Q9H898 229 aa13.9□□□□□ -0.18
MSLN-207ENST00000566549 KIF25-AS1Q9Y6Z4 181 aa13.9□□□□□ -0.18
MSLN-207ENST00000566549 CBY3A6NI87 242 aa13.9□□□□□ -0.18
MSLN-207ENST00000566549 KNCNA6PVL3 124 aa13.9□□□□□ -0.18
MSLN-207ENST00000566549 DPM2O94777 84 aa13.9□□□□□ -0.18
MSLN-207ENST00000566549 NXPH4O95158 308 aa13.9□□□□□ -0.18
MSLN-207ENST00000566549 LINC00315P59091 139 aa13.9□□□□□ -0.18
MSLN-207ENST00000566549 ZC2HC1BQ5TFG8 222 aa13.9□□□□□ -0.18
MSLN-207ENST00000566549 ORAOV1Q8WV07 137 aa13.9□□□□□ -0.18
MSLN-207ENST00000566549 FLNAP21333 2647 aaKnown RBP13.89□□□□□ -0.19
MSLN-207ENST00000566549 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.89□□□□□ -0.19
MSLN-207ENST00000566549 TAX1BP3O14907 124 aa13.89□□□□□ -0.19
MSLN-207ENST00000566549 ORMDL2Q53FV1 153 aa13.89□□□□□ -0.19
MSLN-207ENST00000566549 IGHV3-16A0A0C4DH30 117 aa13.89□□□□□ -0.19
MSLN-207ENST00000566549 HTN1P15515 57 aa13.89□□□□□ -0.19
MSLN-207ENST00000566549 TMEM97Q5BJF2 176 aa13.89□□□□□ -0.19
MSLN-207ENST00000566549 SUMO4Q6EEV6 95 aa13.88□□□□□ -0.19
MSLN-207ENST00000566549 SCGB3A1Q96QR1 104 aa13.88□□□□□ -0.19
MSLN-207ENST00000566549 LINC01619G3V211 115 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms