RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 CYSLTR1Q9Y271 337 aa10.77□□□□□ -0.69
CDH1-209ENST00000566510 IGLL5B9A064 214 aa10.77□□□□□ -0.69
CDH1-209ENST00000566510 H3BUX3 64 aa10.77□□□□□ -0.69
CDH1-209ENST00000566510 HLA-DRB4P13762 266 aa10.77□□□□□ -0.69
CDH1-209ENST00000566510 HLA-DRB4X5D2U9 266 aa10.77□□□□□ -0.69
CDH1-209ENST00000566510 CELSR2Q9HCU4 2923 aa10.77□□□□□ -0.69
CDH1-209ENST00000566510 TRAV12-1A0A0B4J245 112 aa10.76□□□□□ -0.69
CDH1-209ENST00000566510 TEX48A0A1B0GUV7 120 aa10.76□□□□□ -0.69
CDH1-209ENST00000566510 IGHV4-38-2P0DP08 117 aa10.76□□□□□ -0.69
CDH1-209ENST00000566510 BLCAPP62952 87 aa10.76□□□□□ -0.69
CDH1-209ENST00000566510 C19orf54Q5BKX5 351 aa10.76□□□□□ -0.69
CDH1-209ENST00000566510 C20orf78Q9BR46 151 aa10.76□□□□□ -0.69
CDH1-209ENST00000566510 RHPN1-AS1Q9BWJ2 59 aa10.76□□□□□ -0.69
CDH1-209ENST00000566510 MYMXA0A1B0GTQ4 84 aa10.76□□□□□ -0.69
CDH1-209ENST00000566510 H3BMG7 143 aa10.76□□□□□ -0.69
CDH1-209ENST00000566510 NEXN-AS1Q8NBZ9 246 aa10.76□□□□□ -0.69
CDH1-209ENST00000566510 SORL1Q92673 2214 aa10.75□□□□□ -0.69
CDH1-209ENST00000566510 SOCS3O14543 225 aa10.75□□□□□ -0.69
CDH1-209ENST00000566510 AMTNQ6UX39 209 aa10.75□□□□□ -0.69
CDH1-209ENST00000566510 BAALCQ8WXS3 180 aa10.75□□□□□ -0.69
CDH1-209ENST00000566510 ITPR1Q14643 2758 aa10.75□□□□□ -0.69
CDH1-209ENST00000566510 Q6ZS46 218 aa10.75□□□□□ -0.69
CDH1-209ENST00000566510 MTURNQ8N3F0 131 aa10.75□□□□□ -0.69
CDH1-209ENST00000566510 DOPEY2Q9Y3R5 2298 aa10.74□□□□□ -0.69
CDH1-209ENST00000566510 IGHV4-61A0A0C4DH41 118 aa10.74□□□□□ -0.69
CDH1-209ENST00000566510 PRSS29PA6NIE9 313 aa10.74□□□□□ -0.69
CDH1-209ENST00000566510 E9PLD3 99 aa10.74□□□□□ -0.69
CDH1-209ENST00000566510 RNASE3P12724 160 aaKnown RBP10.74□□□□□ -0.69
CDH1-209ENST00000566510 EMP1P54849 157 aa10.74□□□□□ -0.69
CDH1-209ENST00000566510 TAL2Q16559 108 aa10.74□□□□□ -0.69
CDH1-209ENST00000566510 SCGB1D4Q6XE38 83 aa10.74□□□□□ -0.69
CDH1-209ENST00000566510 FOXI2Q6ZQN5 318 aa10.74□□□□□ -0.69
CDH1-209ENST00000566510 ATP6V0BQ99437 205 aa10.74□□□□□ -0.69
CDH1-209ENST00000566510 F5H697 171 aa10.74□□□□□ -0.69
CDH1-209ENST00000566510 JPT2Q9H910 190 aa10.74□□□□□ -0.69
CDH1-209ENST00000566510 SLC25A16P16260 332 aa10.73□□□□□ -0.69
CDH1-209ENST00000566510 EDN2P20800 178 aa10.73□□□□□ -0.69
CDH1-209ENST00000566510 WFDC2Q14508 124 aa10.73□□□□□ -0.69
CDH1-209ENST00000566510 USMG5Q96IX5 58 aa10.73□□□□□ -0.69
CDH1-209ENST00000566510 PRADC1Q9BSG0 188 aa10.73□□□□□ -0.69
CDH1-209ENST00000566510 A0A087WWL8 130 aa10.73□□□□□ -0.69
CDH1-209ENST00000566510 FAM159AQ6UWV7 190 aa10.73□□□□□ -0.69
CDH1-209ENST00000566510 ZNF815PA8K554 130 aa10.72□□□□□ -0.69
CDH1-209ENST00000566510 DUSP14O95147 198 aaKnown RBP10.72□□□□□ -0.69
CDH1-209ENST00000566510 CD300EQ496F6 205 aaPredicted RBP10.72□□□□□ -0.69
CDH1-209ENST00000566510 PIMREGQ9BSJ6 248 aa10.72□□□□□ -0.69
CDH1-209ENST00000566510 TRBV7-3A0A075B6L6 115 aa10.71□□□□□ -0.69
CDH1-209ENST00000566510 RNF223E7ERA6 249 aa10.71□□□□□ -0.69
CDH1-209ENST00000566510 IGKV3-20P01619 116 aa10.71□□□□□ -0.69
CDH1-209ENST00000566510 IGHG2P01859 326 aa10.71□□□□□ -0.69
CDH1-209ENST00000566510 LGALS1P09382 135 aaKnown RBP10.71□□□□□ -0.69
CDH1-209ENST00000566510 GNLYP22749 145 aa10.71□□□□□ -0.69
CDH1-209ENST00000566510 CRIP2P52943 208 aaPredicted RBP10.71□□□□□ -0.69
CDH1-209ENST00000566510 SRSF9Q13242 221 aaKnown RBP eCLIP10.71□□□□□ -0.69
CDH1-209ENST00000566510 DAZ1Q9NQZ3 744 aaKnown RBP10.71□□□□□ -0.69
CDH1-209ENST00000566510 TRAV12-3A0A0B4J271 114 aa10.71□□□□□ -0.69
CDH1-209ENST00000566510 CD7P09564 240 aa10.71□□□□□ -0.69
CDH1-209ENST00000566510 FAM74A4Q5TZK3 123 aa10.71□□□□□ -0.69
CDH1-209ENST00000566510 KLHL30-AS1Q8NEE0 82 aa10.71□□□□□ -0.69
CDH1-209ENST00000566510 TP53TG1Q9Y2A0 90 aa10.71□□□□□ -0.69
CDH1-209ENST00000566510 HOXA3O43365 443 aaPredicted RBP10.71□□□□□ -0.7
CDH1-209ENST00000566510 SFTA2Q6UW10 78 aa10.71□□□□□ -0.7
CDH1-209ENST00000566510 SH2D6Q7Z4S9 175 aa10.71□□□□□ -0.7
CDH1-209ENST00000566510 PPP1R17O96001 155 aa10.7□□□□□ -0.7
CDH1-209ENST00000566510 ETDBQ3ZM63 59 aa10.7□□□□□ -0.7
CDH1-209ENST00000566510 FAM19A4Q96LR4 140 aa10.7□□□□□ -0.7
CDH1-209ENST00000566510 F8W1H4 67 aa10.7□□□□□ -0.7
CDH1-209ENST00000566510 RPL39P62891 51 aaKnown RBP10.7□□□□□ -0.7
CDH1-209ENST00000566510 RRN3P1Q2M238 152 aa10.7□□□□□ -0.7
CDH1-209ENST00000566510 TMEM95Q3KNT9 176 aa10.7□□□□□ -0.7
CDH1-209ENST00000566510 CREBBPQ92793 2442 aa10.69□□□□□ -0.7
CDH1-209ENST00000566510 MED14OSP0DP75 135 aa10.69□□□□□ -0.7
CDH1-209ENST00000566510 PLEKHB2Q96CS7 222 aa10.69□□□□□ -0.7
CDH1-209ENST00000566510 CCL19Q99731 98 aa10.69□□□□□ -0.7
CDH1-209ENST00000566510 MRPL16Q9NX20 251 aaKnown RBP10.69□□□□□ -0.7
CDH1-209ENST00000566510 CSMD2Q7Z408 3487 aa10.69□□□□□ -0.7
CDH1-209ENST00000566510 PGPEP1Q9NXJ5 209 aa10.69□□□□□ -0.7
CDH1-209ENST00000566510 GAGE13Q4V321 117 aa10.68□□□□□ -0.7
CDH1-209ENST00000566510 SUMO4Q6EEV6 95 aa10.68□□□□□ -0.7
CDH1-209ENST00000566510 KIR2DL4Q99706 377 aa10.68□□□□□ -0.7
CDH1-209ENST00000566510 A6NDX4 124 aa10.68□□□□□ -0.7
CDH1-209ENST00000566510 ID1P41134 155 aa10.68□□□□□ -0.7
CDH1-209ENST00000566510 TRAV12-2A0A075B6T6 113 aa10.67□□□□□ -0.7
CDH1-209ENST00000566510 C11orf86A6NJI1 115 aa10.67□□□□□ -0.7
CDH1-209ENST00000566510 H3BUA1 57 aa10.67□□□□□ -0.7
CDH1-209ENST00000566510 ZNF688P0C7X2 276 aa10.67□□□□□ -0.7
CDH1-209ENST00000566510 CLEC2AQ6UVW9 174 aa10.67□□□□□ -0.7
CDH1-209ENST00000566510 ZFP2Q6ZN57 461 aa10.67□□□□□ -0.7
CDH1-209ENST00000566510 ZNF256Q9Y2P7 627 aaPredicted RBP10.67□□□□□ -0.7
CDH1-209ENST00000566510 TMEM238C9JI98 176 aa10.67□□□□□ -0.7
CDH1-209ENST00000566510 CRYGDP07320 174 aa10.67□□□□□ -0.7
CDH1-209ENST00000566510 ATP5J2P56134 94 aa10.67□□□□□ -0.7
CDH1-209ENST00000566510 TMEM170BQ5T4T1 132 aa10.67□□□□□ -0.7
CDH1-209ENST00000566510 GTSF1LQ9H1H1 148 aa10.67□□□□□ -0.7
CDH1-209ENST00000566510 SPANXB1Q9NS25 103 aaPredicted RBP10.67□□□□□ -0.7
CDH1-209ENST00000566510 APOMO95445 188 aa10.66□□□□□ -0.7
CDH1-209ENST00000566510 LINC00315P59091 139 aa10.66□□□□□ -0.7
CDH1-209ENST00000566510 APRG1Q8IVJ8 170 aa10.66□□□□□ -0.7
CDH1-209ENST00000566510 KIF25-AS1Q9Y6Z4 181 aa10.66□□□□□ -0.7
CDH1-209ENST00000566510 IGHV4-30-2A0A087WSY4 118 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms