RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 MLST8Q9BVC4 326 aa9.43□□□□□ -0.9
VPS9D1-204ENST00000565023 VAX2Q9UIW0 290 aa9.43□□□□□ -0.9
VPS9D1-204ENST00000565023 FAT2Q9NYQ8 4349 aa9.43□□□□□ -0.9
VPS9D1-204ENST00000565023 H3BNG1 76 aa9.42□□□□□ -0.9
VPS9D1-204ENST00000565023 RPL35P42766 123 aaKnown RBP9.42□□□□□ -0.9
VPS9D1-204ENST00000565023 FHL2Q14192 279 aa9.42□□□□□ -0.9
VPS9D1-204ENST00000565023 ZNF674Q2M3X9 581 aa9.42□□□□□ -0.9
VPS9D1-204ENST00000565023 BAGE2Q86Y30 109 aa9.42□□□□□ -0.9
VPS9D1-204ENST00000565023 HHLA3Q9XRX5 114 aa9.42□□□□□ -0.9
VPS9D1-204ENST00000565023 ICOSQ9Y6W8 199 aa9.42□□□□□ -0.9
VPS9D1-204ENST00000565023 IGKV3D-20A0A0C4DH25 116 aa9.41□□□□□ -0.9
VPS9D1-204ENST00000565023 SH2D1AO60880 128 aa9.41□□□□□ -0.9
VPS9D1-204ENST00000565023 CRYBA4P53673 196 aa9.41□□□□□ -0.9
VPS9D1-204ENST00000565023 TNP2Q05952 138 aa9.41□□□□□ -0.9
VPS9D1-204ENST00000565023 FAM162BQ5T6X4 162 aa9.41□□□□□ -0.9
VPS9D1-204ENST00000565023 TEX261Q6UWH6 196 aa9.41□□□□□ -0.9
VPS9D1-204ENST00000565023 RASL10AQ92737 203 aa9.41□□□□□ -0.9
VPS9D1-204ENST00000565023 DERL1Q9BUN8 251 aa9.41□□□□□ -0.9
VPS9D1-204ENST00000565023 PRO0255Q9UI72 69 aa9.41□□□□□ -0.9
VPS9D1-204ENST00000565023 MRPS16Q9Y3D3 137 aaKnown RBP9.41□□□□□ -0.9
VPS9D1-204ENST00000565023 C9JCJ5 164 aa9.4□□□□□ -0.9
VPS9D1-204ENST00000565023 NHLRC2Q8NBF2 726 aa9.4□□□□□ -0.9
VPS9D1-204ENST00000565023 KRTAP1-5Q9BYS1 174 aa9.4□□□□□ -0.9
VPS9D1-204ENST00000565023 RBFOX3A6NFN3 312 aa9.39□□□□□ -0.91
VPS9D1-204ENST00000565023 KRBOX1C9JBD0 128 aa9.39□□□□□ -0.91
VPS9D1-204ENST00000565023 M0R2P5 195 aa9.39□□□□□ -0.91
VPS9D1-204ENST00000565023 ORM1P02763 201 aa9.39□□□□□ -0.91
VPS9D1-204ENST00000565023 RNASE3P12724 160 aaKnown RBP9.39□□□□□ -0.91
VPS9D1-204ENST00000565023 OR4C5Q8NGB2 326 aa9.39□□□□□ -0.91
VPS9D1-204ENST00000565023 C9orf85Q96MD7 179 aa9.39□□□□□ -0.91
VPS9D1-204ENST00000565023 MED9Q9NWA0 146 aa9.39□□□□□ -0.91
VPS9D1-204ENST00000565023 HERC1Q15751 4861 aa9.39□□□□□ -0.91
VPS9D1-204ENST00000565023 B4DEV8 164 aa9.38□□□□□ -0.91
VPS9D1-204ENST00000565023 GYPEP15421 78 aa9.38□□□□□ -0.91
VPS9D1-204ENST00000565023 SLAQ13239 276 aa9.38□□□□□ -0.91
VPS9D1-204ENST00000565023 MRPL23Q16540 153 aaKnown RBP9.38□□□□□ -0.91
VPS9D1-204ENST00000565023 CENPWQ5EE01 88 aa9.38□□□□□ -0.91
VPS9D1-204ENST00000565023 TTC32Q5I0X7 151 aa9.38□□□□□ -0.91
VPS9D1-204ENST00000565023 ZNF506Q5JVG8 444 aa9.38□□□□□ -0.91
VPS9D1-204ENST00000565023 DNLZQ5SXM8 178 aa9.38□□□□□ -0.91
VPS9D1-204ENST00000565023 ZNF575Q86XF7 245 aa9.38□□□□□ -0.91
VPS9D1-204ENST00000565023 PCNPQ8WW12 178 aaKnown RBP9.38□□□□□ -0.91
VPS9D1-204ENST00000565023 SMIM12Q96EX1 92 aa9.38□□□□□ -0.91
VPS9D1-204ENST00000565023 UPK3BQ9BT76 320 aa9.38□□□□□ -0.91
VPS9D1-204ENST00000565023 DNAH11Q96DT5 4516 aa9.37□□□□□ -0.91
VPS9D1-204ENST00000565023 TRBV20OR9-2A0A075B6H5 130 aa9.37□□□□□ -0.91
VPS9D1-204ENST00000565023 TRAV4A0A0B4J268 109 aa9.37□□□□□ -0.91
VPS9D1-204ENST00000565023 LOC100131303A0A0U1RQF7 123 aa9.37□□□□□ -0.91
VPS9D1-204ENST00000565023 RAB19A4D1S5 217 aa9.37□□□□□ -0.91
VPS9D1-204ENST00000565023 TMEM250H0YL14 139 aa9.37□□□□□ -0.91
VPS9D1-204ENST00000565023 M0R036 132 aa9.37□□□□□ -0.91
VPS9D1-204ENST00000565023 NXPH4O95158 308 aa9.37□□□□□ -0.91
VPS9D1-204ENST00000565023 IGLV2-8P01709 118 aa9.37□□□□□ -0.91
VPS9D1-204ENST00000565023 ASIPP42127 132 aa9.37□□□□□ -0.91
VPS9D1-204ENST00000565023 LINC01559Q495D7 138 aa9.37□□□□□ -0.91
VPS9D1-204ENST00000565023 PTH2Q96A98 100 aa9.37□□□□□ -0.91
VPS9D1-204ENST00000565023 IGHV3-73A0A0B4J1V6 119 aa9.36□□□□□ -0.91
VPS9D1-204ENST00000565023 SIVA1O15304 175 aa9.36□□□□□ -0.91
VPS9D1-204ENST00000565023 NDUFS6O75380 124 aaKnown RBP9.36□□□□□ -0.91
VPS9D1-204ENST00000565023 SRIP30626 198 aa9.36□□□□□ -0.91
VPS9D1-204ENST00000565023 GNG4P50150 75 aa9.36□□□□□ -0.91
VPS9D1-204ENST00000565023 NEGR1Q7Z3B1 354 aa9.36□□□□□ -0.91
VPS9D1-204ENST00000565023 FAM210AQ96ND0 272 aa9.36□□□□□ -0.91
VPS9D1-204ENST00000565023 IL36BQ9NZH7 164 aa9.36□□□□□ -0.91
VPS9D1-204ENST00000565023 K7EQD1 137 aa9.35□□□□□ -0.91
VPS9D1-204ENST00000565023 S100A4P26447 101 aaKnown RBP9.35□□□□□ -0.91
VPS9D1-204ENST00000565023 ZNF876PQ49A33 203 aa9.35□□□□□ -0.91
VPS9D1-204ENST00000565023 TOR2AQ5JU69 321 aa9.35□□□□□ -0.91
VPS9D1-204ENST00000565023 PRR27Q6MZM9 219 aa9.35□□□□□ -0.91
VPS9D1-204ENST00000565023 LYPD5Q6UWN5 251 aa9.35□□□□□ -0.91
VPS9D1-204ENST00000565023 TMSB15BA0A087X1C1 80 aa9.34□□□□□ -0.91
VPS9D1-204ENST00000565023 GRIFINA4D1Z8 144 aa9.34□□□□□ -0.91
VPS9D1-204ENST00000565023 PGPEP1LA6NFU8 196 aa9.34□□□□□ -0.91
VPS9D1-204ENST00000565023 CXCL1P09341 107 aa9.34□□□□□ -0.91
VPS9D1-204ENST00000565023 PIK3CD-AS1Q5SR53 167 aa9.34□□□□□ -0.91
VPS9D1-204ENST00000565023 EIF5A2Q9GZV4 153 aaKnown RBP9.34□□□□□ -0.91
VPS9D1-204ENST00000565023 PARLQ9H300 379 aa9.34□□□□□ -0.91
VPS9D1-204ENST00000565023 SCRT2Q9NQ03 307 aa9.34□□□□□ -0.91
VPS9D1-204ENST00000565023 PKD1P98161 4303 aa9.34□□□□□ -0.91
VPS9D1-204ENST00000565023 H3BVH4 76 aa9.33□□□□□ -0.92
VPS9D1-204ENST00000565023 ARMS2P0C7Q2 107 aa9.33□□□□□ -0.92
VPS9D1-204ENST00000565023 MGST1P10620 155 aaKnown RBP9.33□□□□□ -0.92
VPS9D1-204ENST00000565023 LINC00315P59091 139 aa9.33□□□□□ -0.92
VPS9D1-204ENST00000565023 RPL19P84098 196 aaKnown RBP9.33□□□□□ -0.92
VPS9D1-204ENST00000565023 A0A1W2PPQ1 181 aa9.32□□□□□ -0.92
VPS9D1-204ENST00000565023 C19orf71A6NCJ1 209 aa9.32□□□□□ -0.92
VPS9D1-204ENST00000565023 C16orf90A8MZG2 172 aa9.32□□□□□ -0.92
VPS9D1-204ENST00000565023 RS1O15537 224 aa9.32□□□□□ -0.92
VPS9D1-204ENST00000565023 MED14OSP0DP75 135 aa9.32□□□□□ -0.92
VPS9D1-204ENST00000565023 GATA1P15976 413 aaPredicted RBP9.32□□□□□ -0.92
VPS9D1-204ENST00000565023 CFAP126Q5VTH2 177 aa9.32□□□□□ -0.92
VPS9D1-204ENST00000565023 WFDC10BQ8IUB3 73 aa9.32□□□□□ -0.92
VPS9D1-204ENST00000565023 TNFRSF18Q9Y5U5 241 aa9.32□□□□□ -0.92
VPS9D1-204ENST00000565023 CIDEAO60543 219 aa9.31□□□□□ -0.92
VPS9D1-204ENST00000565023 SRP19P09132 144 aaKnown RBP9.31□□□□□ -0.92
VPS9D1-204ENST00000565023 OCC1Q8TAD7 63 aa9.31□□□□□ -0.92
VPS9D1-204ENST00000565023 BIN3Q9NQY0 253 aa9.31□□□□□ -0.92
VPS9D1-204ENST00000565023 HSPG2P98160 4391 aa9.31□□□□□ -0.92
VPS9D1-204ENST00000565023 A8MWV9 139 aa9.3□□□□□ -0.92
VPS9D1-204ENST00000565023 DMRTA1Q5VZB9 504 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms