RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 PMS2CLQ68D20 193 aa4.8□□□□□ -1.64
PTPN9-204ENST00000564970 PRNTQ86SH4 94 aa4.8□□□□□ -1.64
PTPN9-204ENST00000564970 VKORC1L1Q8N0U8 176 aa4.8□□□□□ -1.64
PTPN9-204ENST00000564970 SMIM2Q9BVW6 85 aa4.8□□□□□ -1.64
PTPN9-204ENST00000564970 RNF7Q9UBF6 113 aa4.8□□□□□ -1.64
PTPN9-204ENST00000564970 LRRK1Q38SD2 2015 aa4.8□□□□□ -1.64
PTPN9-204ENST00000564970 FRYQ5TBA9 3013 aa4.79□□□□□ -1.64
PTPN9-204ENST00000564970 MUC22E2RYF6 1773 aaPredicted RBP4.79□□□□□ -1.64
PTPN9-204ENST00000564970 PTPN13Q12923 2485 aa4.79□□□□□ -1.64
PTPN9-204ENST00000564970 SPAG17Q6Q759 2223 aa4.79□□□□□ -1.64
PTPN9-204ENST00000564970 PRSS38A1L453 326 aa4.79□□□□□ -1.64
PTPN9-204ENST00000564970 IBA57-AS1B1ANH7 110 aa4.79□□□□□ -1.64
PTPN9-204ENST00000564970 ZNF32P17041 273 aa4.79□□□□□ -1.64
PTPN9-204ENST00000564970 XCL1P47992 114 aa4.79□□□□□ -1.64
PTPN9-204ENST00000564970 CDSNQ15517 529 aa4.79□□□□□ -1.64
PTPN9-204ENST00000564970 RHOHQ15669 191 aa4.79□□□□□ -1.64
PTPN9-204ENST00000564970 BEAN1Q3B7T3 259 aa4.79□□□□□ -1.64
PTPN9-204ENST00000564970 PVRIGQ6DKI7 326 aa4.79□□□□□ -1.64
PTPN9-204ENST00000564970 SFTA2Q6UW10 78 aa4.79□□□□□ -1.64
PTPN9-204ENST00000564970 PATE2Q6UY27 113 aa4.79□□□□□ -1.64
PTPN9-204ENST00000564970 FP248Q71RG6 208 aaPredicted RBP4.79□□□□□ -1.64
PTPN9-204ENST00000564970 DYNAPQ8N1N2 210 aa4.79□□□□□ -1.64
PTPN9-204ENST00000564970 CD177Q8N6Q3 437 aa4.79□□□□□ -1.64
PTPN9-204ENST00000564970 IL17DQ8TAD2 202 aa4.79□□□□□ -1.64
PTPN9-204ENST00000564970 SMCR5Q8TEV8 140 aa4.79□□□□□ -1.64
PTPN9-204ENST00000564970 DYNLRB2Q8TF09 96 aa4.79□□□□□ -1.64
PTPN9-204ENST00000564970 Q96MF0 132 aa4.79□□□□□ -1.64
PTPN9-204ENST00000564970 CCDC140Q96MF4 163 aa4.79□□□□□ -1.64
PTPN9-204ENST00000564970 TIMM17AQ99595 171 aa4.79□□□□□ -1.64
PTPN9-204ENST00000564970 XCL2Q9UBD3 114 aa4.79□□□□□ -1.64
PTPN9-204ENST00000564970 UBE2D4Q9Y2X8 147 aa4.79□□□□□ -1.64
PTPN9-204ENST00000564970 CEP250Q9BV73 2442 aa4.79□□□□□ -1.64
PTPN9-204ENST00000564970 TEP1Q99973 2627 aaKnown RBP4.78□□□□□ -1.64
PTPN9-204ENST00000564970 MYOFQ9NZM1 2061 aa4.78□□□□□ -1.64
PTPN9-204ENST00000564970 IGHV1OR21-1A0A087WYE8 117 aa4.78□□□□□ -1.64
PTPN9-204ENST00000564970 TRAV13-2A0A0B4J235 113 aa4.78□□□□□ -1.64
PTPN9-204ENST00000564970 H3BTX0 84 aa4.78□□□□□ -1.64
PTPN9-204ENST00000564970 H7BZZ5 65 aa4.78□□□□□ -1.64
PTPN9-204ENST00000564970 M0R1B8 84 aa4.78□□□□□ -1.64
PTPN9-204ENST00000564970 COX7A2LO14548 114 aa4.78□□□□□ -1.64
PTPN9-204ENST00000564970 NDUFS5O43920 106 aa4.78□□□□□ -1.64
PTPN9-204ENST00000564970 ERC2-IT1O76042 136 aa4.78□□□□□ -1.64
PTPN9-204ENST00000564970 CCKP06307 115 aa4.78□□□□□ -1.64
PTPN9-204ENST00000564970 HOXA4Q00056 320 aaPredicted RBP4.78□□□□□ -1.64
PTPN9-204ENST00000564970 FHL2Q14192 279 aa4.78□□□□□ -1.64
PTPN9-204ENST00000564970 PCOLCEQ15113 449 aa4.78□□□□□ -1.64
PTPN9-204ENST00000564970 WFDC11Q8NEX6 87 aa4.78□□□□□ -1.64
PTPN9-204ENST00000564970 FRYLO94915 3013 aa4.78□□□□□ -1.64
PTPN9-204ENST00000564970 ADAMTS20P59510 1910 aa4.78□□□□□ -1.64
PTPN9-204ENST00000564970 SH2D1AO60880 128 aa4.77□□□□□ -1.65
PTPN9-204ENST00000564970 SNRNP200O75643 2136 aaKnown RBP4.77□□□□□ -1.65
PTPN9-204ENST00000564970 VPREB1P12018 145 aa4.77□□□□□ -1.65
PTPN9-204ENST00000564970 ZNF80P51504 273 aaPredicted RBP4.77□□□□□ -1.65
PTPN9-204ENST00000564970 ZNF134P52741 427 aa4.77□□□□□ -1.65
PTPN9-204ENST00000564970 MRPL14Q6P1L8 145 aaKnown RBP4.77□□□□□ -1.65
PTPN9-204ENST00000564970 C16orf47Q6ZP98 133 aaPredicted RBP4.77□□□□□ -1.65
PTPN9-204ENST00000564970 WFDC3Q8IUB2 231 aa4.77□□□□□ -1.65
PTPN9-204ENST00000564970 NRACQ8N912 160 aa4.77□□□□□ -1.65
PTPN9-204ENST00000564970 TECTAO75443 2155 aa4.77□□□□□ -1.65
PTPN9-204ENST00000564970 CGB1A6NKQ9 187 aa4.76□□□□□ -1.65
PTPN9-204ENST00000564970 AVPP01185 164 aa4.76□□□□□ -1.65
PTPN9-204ENST00000564970 GHRHP01286 108 aa4.76□□□□□ -1.65
PTPN9-204ENST00000564970 IGHV1-69P01742 117 aa4.76□□□□□ -1.65
PTPN9-204ENST00000564970 PRSS12P56730 875 aa4.76□□□□□ -1.65
PTPN9-204ENST00000564970 LY6G5CQ5SRR4 150 aa4.76□□□□□ -1.65
PTPN9-204ENST00000564970 DAZ4Q86SG3 579 aaKnown RBP4.76□□□□□ -1.65
PTPN9-204ENST00000564970 LINC00482Q8N8I6 264 aa4.76□□□□□ -1.65
PTPN9-204ENST00000564970 NBEAQ8NFP9 2946 aa4.76□□□□□ -1.65
PTPN9-204ENST00000564970 AMELXQ99217 191 aa4.76□□□□□ -1.65
PTPN9-204ENST00000564970 NDUFA4L2Q9NRX3 87 aa4.76□□□□□ -1.65
PTPN9-204ENST00000564970 TET1Q8NFU7 2136 aa4.76□□□□□ -1.65
PTPN9-204ENST00000564970 SPTBN2O15020 2390 aa4.76□□□□□ -1.65
PTPN9-204ENST00000564970 ITPR1Q14643 2758 aa4.76□□□□□ -1.65
PTPN9-204ENST00000564970 TENM4Q6N022 2769 aa4.75□□□□□ -1.65
PTPN9-204ENST00000564970 IGKV1D-37A0A075B6S9 117 aa4.75□□□□□ -1.65
PTPN9-204ENST00000564970 TRBV27A0A0K0K1C4 114 aa4.75□□□□□ -1.65
PTPN9-204ENST00000564970 CD59P13987 128 aa4.75□□□□□ -1.65
PTPN9-204ENST00000564970 RBM3P98179 157 aaKnown RBP4.75□□□□□ -1.65
PTPN9-204ENST00000564970 MORN5Q5VZ52 161 aa4.75□□□□□ -1.65
PTPN9-204ENST00000564970 IGFL2Q6UWQ7 119 aa4.75□□□□□ -1.65
PTPN9-204ENST00000564970 C2orf66Q6UXQ4 117 aa4.75□□□□□ -1.65
PTPN9-204ENST00000564970 MUSTN1Q8IVN3 82 aa4.75□□□□□ -1.65
PTPN9-204ENST00000564970 TMEM61Q8N0U2 210 aa4.75□□□□□ -1.65
PTPN9-204ENST00000564970 ZNF491Q8N8L2 437 aa4.75□□□□□ -1.65
PTPN9-204ENST00000564970 IMMP1LQ96LU5 166 aa4.75□□□□□ -1.65
PTPN9-204ENST00000564970 KRTAP4-8Q9BYQ9 185 aa4.75□□□□□ -1.65
PTPN9-204ENST00000564970 FGF23Q9GZV9 251 aaPredicted RBP4.75□□□□□ -1.65
PTPN9-204ENST00000564970 CYSTM1Q9H1C7 97 aa4.75□□□□□ -1.65
PTPN9-204ENST00000564970 DAZ3Q9NR90 486 aaKnown RBP4.75□□□□□ -1.65
PTPN9-204ENST00000564970 EP300Q09472 2414 aaPredicted RBP4.75□□□□□ -1.65
PTPN9-204ENST00000564970 MYO7AQ13402 2215 aa4.74□□□□□ -1.65
PTPN9-204ENST00000564970 GON4LQ3T8J9 2241 aa4.74□□□□□ -1.65
PTPN9-204ENST00000564970 PRRC2BQ5JSZ5 2229 aaKnown RBP4.74□□□□□ -1.65
PTPN9-204ENST00000564970 IGHV3OR16-10A0A075B7F0 116 aa4.74□□□□□ -1.65
PTPN9-204ENST00000564970 IGIPA6NJ69 53 aa4.74□□□□□ -1.65
PTPN9-204ENST00000564970 I3L3M4 83 aa4.74□□□□□ -1.65
PTPN9-204ENST00000564970 PAX4O43316 350 aa4.74□□□□□ -1.65
PTPN9-204ENST00000564970 EFNA2O43921 213 aa4.74□□□□□ -1.65
PTPN9-204ENST00000564970 MED14OSP0DP75 135 aa4.74□□□□□ -1.65
PTPN9-204ENST00000564970 HOXD3P31249 432 aaPredicted RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms