RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 ZNF876PQ49A33 203 aa12.02□□□□□ -0.49
USB1-209ENST00000564387 HHLA3Q9XRX5 114 aa12.02□□□□□ -0.49
USB1-209ENST00000564387 NACAE9PAV3 2078 aa12.01□□□□□ -0.49
USB1-209ENST00000564387 TRBV20OR9-2A0A075B6H5 130 aa12.01□□□□□ -0.49
USB1-209ENST00000564387 A0A096LPF7 62 aa12.01□□□□□ -0.49
USB1-209ENST00000564387 M0R036 132 aa12.01□□□□□ -0.49
USB1-209ENST00000564387 RS1O15537 224 aa12.01□□□□□ -0.49
USB1-209ENST00000564387 SFTA3P0C7M3 94 aa12.01□□□□□ -0.49
USB1-209ENST00000564387 ZNF506Q5JVG8 444 aa12.01□□□□□ -0.49
USB1-209ENST00000564387 OR4C5Q8NGB2 326 aa12.01□□□□□ -0.49
USB1-209ENST00000564387 RAB19A4D1S5 217 aa12□□□□□ -0.49
USB1-209ENST00000564387 RBFOX3A6NFN3 312 aa12□□□□□ -0.49
USB1-209ENST00000564387 CENPWQ5EE01 88 aa12□□□□□ -0.49
USB1-209ENST00000564387 CFAP126Q5VTH2 177 aa12□□□□□ -0.49
USB1-209ENST00000564387 TEX261Q6UWH6 196 aa12□□□□□ -0.49
USB1-209ENST00000564387 MED9Q9NWA0 146 aa12□□□□□ -0.49
USB1-209ENST00000564387 TRGV4A0A0C4DH28 118 aa11.99□□□□□ -0.49
USB1-209ENST00000564387 C9JCJ5 164 aa11.99□□□□□ -0.49
USB1-209ENST00000564387 TMEM250H0YL14 139 aa11.99□□□□□ -0.49
USB1-209ENST00000564387 PAX4O43316 350 aa11.99□□□□□ -0.49
USB1-209ENST00000564387 ARMS2P0C7Q2 107 aa11.99□□□□□ -0.49
USB1-209ENST00000564387 MED14OSP0DP75 135 aa11.99□□□□□ -0.49
USB1-209ENST00000564387 S100A4P26447 101 aaKnown RBP11.99□□□□□ -0.49
USB1-209ENST00000564387 LINC00588Q9Y4M8 146 aa11.99□□□□□ -0.49
USB1-209ENST00000564387 GRIFINA4D1Z8 144 aa11.98□□□□□ -0.49
USB1-209ENST00000564387 GATA1P15976 413 aaPredicted RBP11.98□□□□□ -0.49
USB1-209ENST00000564387 GNG4P50150 75 aa11.98□□□□□ -0.49
USB1-209ENST00000564387 CCL18P55774 89 aa11.98□□□□□ -0.49
USB1-209ENST00000564387 SSBP4Q9BWG4 385 aaPredicted RBP11.98□□□□□ -0.49
USB1-209ENST00000564387 C19orf71A6NCJ1 209 aa11.97□□□□□ -0.49
USB1-209ENST00000564387 H3BVH4 76 aa11.97□□□□□ -0.49
USB1-209ENST00000564387 ESRGQ1W209 222 aa11.97□□□□□ -0.49
USB1-209ENST00000564387 UBE2DNLQ8IWF7 75 aa11.97□□□□□ -0.49
USB1-209ENST00000564387 ZNRF2Q8NHG8 242 aa11.97□□□□□ -0.49
USB1-209ENST00000564387 FAM210AQ96ND0 272 aa11.97□□□□□ -0.49
USB1-209ENST00000564387 A8MWV9 139 aa11.96□□□□□ -0.49
USB1-209ENST00000564387 DMRTA1Q5VZB9 504 aa11.96□□□□□ -0.49
USB1-209ENST00000564387 UFSP1Q6NVU6 142 aa11.96□□□□□ -0.49
USB1-209ENST00000564387 ZFP2Q6ZN57 461 aa11.96□□□□□ -0.49
USB1-209ENST00000564387 Q6ZR54 194 aa11.96□□□□□ -0.49
USB1-209ENST00000564387 UPK3BQ9BT76 320 aa11.96□□□□□ -0.49
USB1-209ENST00000564387 ICOSQ9Y6W8 199 aa11.96□□□□□ -0.49
USB1-209ENST00000564387 TMSB15BA0A087X1C1 80 aa11.95□□□□□ -0.5
USB1-209ENST00000564387 TRBV6-4A0A1B0GX49 114 aa11.95□□□□□ -0.5
USB1-209ENST00000564387 SNAI2O43623 268 aa11.95□□□□□ -0.5
USB1-209ENST00000564387 NXPH4O95158 308 aa11.95□□□□□ -0.5
USB1-209ENST00000564387 RPL19P84098 196 aaKnown RBP11.95□□□□□ -0.5
USB1-209ENST00000564387 MRPL23Q16540 153 aaKnown RBP11.95□□□□□ -0.5
USB1-209ENST00000564387 PRR27Q6MZM9 219 aa11.95□□□□□ -0.5
USB1-209ENST00000564387 PARLQ9H300 379 aa11.95□□□□□ -0.5
USB1-209ENST00000564387 K7EQD1 137 aa11.94□□□□□ -0.5
USB1-209ENST00000564387 OR5AL1P0C617 328 aa11.94□□□□□ -0.5
USB1-209ENST00000564387 BIN3Q9NQY0 253 aa11.94□□□□□ -0.5
USB1-209ENST00000564387 MRPS16Q9Y3D3 137 aaKnown RBP11.94□□□□□ -0.5
USB1-209ENST00000564387 TOR2AQ5JU69 321 aa11.93□□□□□ -0.5
USB1-209ENST00000564387 SLC25A29Q8N8R3 303 aa11.93□□□□□ -0.5
USB1-209ENST00000564387 SYT8Q8NBV8 401 aa11.93□□□□□ -0.5
USB1-209ENST00000564387 SFRP2Q96HF1 295 aa11.93□□□□□ -0.5
USB1-209ENST00000564387 PHLDA3Q9Y5J5 127 aa11.93□□□□□ -0.5
USB1-209ENST00000564387 DNAH10Q8IVF4 4471 aa11.92□□□□□ -0.5
USB1-209ENST00000564387 MGST1P10620 155 aaKnown RBP11.92□□□□□ -0.5
USB1-209ENST00000564387 GYPEP15421 78 aa11.92□□□□□ -0.5
USB1-209ENST00000564387 ZFP82Q8N141 532 aa11.92□□□□□ -0.5
USB1-209ENST00000564387 OCC1Q8TAD7 63 aa11.92□□□□□ -0.5
USB1-209ENST00000564387 JPT2Q9H910 190 aa11.92□□□□□ -0.5
USB1-209ENST00000564387 K7EN84 100 aa11.91□□□□□ -0.5
USB1-209ENST00000564387 IGLC6P0CF74 106 aa11.91□□□□□ -0.5
USB1-209ENST00000564387 LYPD5Q6UWN5 251 aa11.91□□□□□ -0.5
USB1-209ENST00000564387 NEGR1Q7Z3B1 354 aa11.91□□□□□ -0.5
USB1-209ENST00000564387 SAMD10Q9BYL1 202 aa11.91□□□□□ -0.5
USB1-209ENST00000564387 EIF5A2Q9GZV4 153 aaKnown RBP11.91□□□□□ -0.5
USB1-209ENST00000564387 RHODO00212 210 aa11.9□□□□□ -0.5
USB1-209ENST00000564387 CRYGDP07320 174 aa11.9□□□□□ -0.5
USB1-209ENST00000564387 SRP19P09132 144 aaKnown RBP11.9□□□□□ -0.5
USB1-209ENST00000564387 RPS20P60866 119 aaKnown RBP11.9□□□□□ -0.5
USB1-209ENST00000564387 RHOHQ15669 191 aa11.9□□□□□ -0.5
USB1-209ENST00000564387 Q6ZSN1 163 aa11.9□□□□□ -0.5
USB1-209ENST00000564387 SH2D6Q7Z4S9 175 aa11.9□□□□□ -0.5
USB1-209ENST00000564387 DAZAP1Q96EP5 407 aaKnown RBP11.9□□□□□ -0.5
USB1-209ENST00000564387 Q9H8V8 135 aa11.9□□□□□ -0.5
USB1-209ENST00000564387 LY96Q9Y6Y9 160 aa11.9□□□□□ -0.5
USB1-209ENST00000564387 DNAH2Q9P225 4427 aa11.9□□□□□ -0.5
USB1-209ENST00000564387 IGLV2-18A0A075B6J9 118 aa11.89□□□□□ -0.51
USB1-209ENST00000564387 IGHV3-73A0A0B4J1V6 119 aa11.89□□□□□ -0.51
USB1-209ENST00000564387 LOC100131303A0A0U1RQF7 123 aa11.89□□□□□ -0.51
USB1-209ENST00000564387 M0R381 172 aa11.89□□□□□ -0.51
USB1-209ENST00000564387 SRIP30626 198 aa11.89□□□□□ -0.51
USB1-209ENST00000564387 TIRAPP58753 221 aa11.89□□□□□ -0.51
USB1-209ENST00000564387 NUDT10Q8NFP7 164 aa11.89□□□□□ -0.51
USB1-209ENST00000564387 OR2D3Q8NGH3 330 aa11.89□□□□□ -0.51
USB1-209ENST00000564387 OR10AG1Q8NH19 301 aa11.89□□□□□ -0.51
USB1-209ENST00000564387 NUDT11Q96G61 164 aa11.89□□□□□ -0.51
USB1-209ENST00000564387 PRADC1Q9BSG0 188 aa11.89□□□□□ -0.51
USB1-209ENST00000564387 EPPK1P58107 5090 aaKnown RBP11.88□□□□□ -0.51
USB1-209ENST00000564387 NBDYA0A0U1RRE5 68 aa11.88□□□□□ -0.51
USB1-209ENST00000564387 P01737 135 aa11.88□□□□□ -0.51
USB1-209ENST00000564387 PCNPQ8WW12 178 aaKnown RBP11.88□□□□□ -0.51
USB1-209ENST00000564387 FRAS1Q86XX4 4008 aa11.87□□□□□ -0.51
USB1-209ENST00000564387 M0R2N4 97 aa11.87□□□□□ -0.51
USB1-209ENST00000564387 LINC00694P0DN24 101 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms