RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 FANCD2OSQ96PS1 177 aa9.44□□□□□ -0.9
SCAMP2-204ENST00000563829 IGHV3-33P01772 117 aa9.43□□□□□ -0.9
SCAMP2-204ENST00000563829 LINC01620Q4KN68 170 aa9.43□□□□□ -0.9
SCAMP2-204ENST00000563829 FDCSPQ8NFU4 85 aa9.43□□□□□ -0.9
SCAMP2-204ENST00000563829 SLC50A1Q9BRV3 221 aa9.43□□□□□ -0.9
SCAMP2-204ENST00000563829 IGHV3-49A0A0A0MS15 119 aa9.43□□□□□ -0.9
SCAMP2-204ENST00000563829 HES1Q14469 280 aa9.43□□□□□ -0.9
SCAMP2-204ENST00000563829 M0QXV9 152 aa9.42□□□□□ -0.9
SCAMP2-204ENST00000563829 IGLV4-69A0A075B6H9 119 aa9.42□□□□□ -0.9
SCAMP2-204ENST00000563829 H3BMM0 161 aa9.42□□□□□ -0.9
SCAMP2-204ENST00000563829 EIF4EBP3O60516 100 aaPredicted RBP9.42□□□□□ -0.9
SCAMP2-204ENST00000563829 ATXN8Q156A1 80 aa9.42□□□□□ -0.9
SCAMP2-204ENST00000563829 UBE2WQ96B02 151 aa9.42□□□□□ -0.9
SCAMP2-204ENST00000563829 IGHV3-64A0A075B6Q5 118 aa9.42□□□□□ -0.9
SCAMP2-204ENST00000563829 MSRB2Q9Y3D2 182 aa9.42□□□□□ -0.9
SCAMP2-204ENST00000563829 CD59P13987 128 aa9.41□□□□□ -0.9
SCAMP2-204ENST00000563829 ABCA4P78363 2273 aa9.41□□□□□ -0.9
SCAMP2-204ENST00000563829 CTSGP08311 255 aa9.41□□□□□ -0.9
SCAMP2-204ENST00000563829 LGALS3P17931 250 aaKnown RBP9.41□□□□□ -0.9
SCAMP2-204ENST00000563829 ADIPOQQ15848 244 aa9.41□□□□□ -0.9
SCAMP2-204ENST00000563829 PRR30Q53SZ7 412 aaPredicted RBP9.41□□□□□ -0.9
SCAMP2-204ENST00000563829 TP53TG1Q9Y2A0 90 aa9.41□□□□□ -0.9
SCAMP2-204ENST00000563829 IGLV11-55A0A075B6I3 123 aa9.4□□□□□ -0.9
SCAMP2-204ENST00000563829 S100A4P26447 101 aaKnown RBP9.4□□□□□ -0.9
SCAMP2-204ENST00000563829 RPL39P62891 51 aaKnown RBP9.4□□□□□ -0.9
SCAMP2-204ENST00000563829 DUX3Q96PT4 197 aa9.4□□□□□ -0.9
SCAMP2-204ENST00000563829 MDFICQ9P1T7 246 aa9.4□□□□□ -0.9
SCAMP2-204ENST00000563829 J3QQQ9 107 aa9.4□□□□□ -0.9
SCAMP2-204ENST00000563829 NBR2O15453 112 aa9.4□□□□□ -0.9
SCAMP2-204ENST00000563829 C2orf82Q6UX34 121 aa9.4□□□□□ -0.9
SCAMP2-204ENST00000563829 ASCL5Q7RTU5 278 aa9.4□□□□□ -0.9
SCAMP2-204ENST00000563829 TMEM263Q8WUH6 116 aaKnown RBP9.4□□□□□ -0.9
SCAMP2-204ENST00000563829 TSHBP01222 138 aa9.4□□□□□ -0.91
SCAMP2-204ENST00000563829 MUSTN1Q8IVN3 82 aa9.4□□□□□ -0.91
SCAMP2-204ENST00000563829 LGALS9O00182 355 aa9.39□□□□□ -0.91
SCAMP2-204ENST00000563829 IGF1P05019 195 aa9.39□□□□□ -0.91
SCAMP2-204ENST00000563829 CACNA1HO95180 2353 aa9.39□□□□□ -0.91
SCAMP2-204ENST00000563829 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.38□□□□□ -0.91
SCAMP2-204ENST00000563829 ZNRF2Q8NHG8 242 aa9.38□□□□□ -0.91
SCAMP2-204ENST00000563829 PHLDA3Q9Y5J5 127 aa9.38□□□□□ -0.91
SCAMP2-204ENST00000563829 ATMQ13315 3056 aa9.38□□□□□ -0.91
SCAMP2-204ENST00000563829 SVEP1Q4LDE5 3571 aa9.38□□□□□ -0.91
SCAMP2-204ENST00000563829 TRBV10-2A0A0K0K1G8 114 aa9.38□□□□□ -0.91
SCAMP2-204ENST00000563829 ATP5J2P56134 94 aa9.38□□□□□ -0.91
SCAMP2-204ENST00000563829 PMVKQ15126 192 aa9.38□□□□□ -0.91
SCAMP2-204ENST00000563829 DPH3P1Q9H4G8 78 aa9.38□□□□□ -0.91
SCAMP2-204ENST00000563829 COL27A1Q8IZC6 1860 aaPredicted RBP9.38□□□□□ -0.91
SCAMP2-204ENST00000563829 IGHV4-4A0A075B6R2 117 aa9.38□□□□□ -0.91
SCAMP2-204ENST00000563829 MBD3L4A6NDZ8 208 aaPredicted RBP9.38□□□□□ -0.91
SCAMP2-204ENST00000563829 MBD3L3A6NE82 208 aaPredicted RBP9.38□□□□□ -0.91
SCAMP2-204ENST00000563829 MBD3L5A6NJ08 208 aaPredicted RBP9.38□□□□□ -0.91
SCAMP2-204ENST00000563829 RPL13AP40429 203 aaKnown RBP9.38□□□□□ -0.91
SCAMP2-204ENST00000563829 PAPPA-AS1Q5QFB9 102 aa9.38□□□□□ -0.91
SCAMP2-204ENST00000563829 PRR9Q5T870 116 aa9.38□□□□□ -0.91
SCAMP2-204ENST00000563829 MBD3L2Q8NHZ7 208 aaPredicted RBP9.38□□□□□ -0.91
SCAMP2-204ENST00000563829 DMXL1Q9Y485 3027 aa9.37□□□□□ -0.91
SCAMP2-204ENST00000563829 RNF223E7ERA6 249 aa9.37□□□□□ -0.91
SCAMP2-204ENST00000563829 LYNX1G3V0Z9 82 aa9.37□□□□□ -0.91
SCAMP2-204ENST00000563829 P0DMU3 169 aa9.37□□□□□ -0.91
SCAMP2-204ENST00000563829 FAM231AP0DMU4 169 aa9.37□□□□□ -0.91
SCAMP2-204ENST00000563829 FAM231CP0DMU5 169 aa9.37□□□□□ -0.91
SCAMP2-204ENST00000563829 LINC00694P0DN24 101 aa9.37□□□□□ -0.91
SCAMP2-204ENST00000563829 LYNX1P0DP58 116 aa9.37□□□□□ -0.91
SCAMP2-204ENST00000563829 NDPQ00604 133 aa9.37□□□□□ -0.91
SCAMP2-204ENST00000563829 LINC01587Q99440 93 aa9.37□□□□□ -0.91
SCAMP2-204ENST00000563829 TMEM126AQ9H061 195 aa9.37□□□□□ -0.91
SCAMP2-204ENST00000563829 TRIAP1O43715 76 aa9.37□□□□□ -0.91
SCAMP2-204ENST00000563829 AMELXQ99217 191 aa9.37□□□□□ -0.91
SCAMP2-204ENST00000563829 SPANXA1Q9NS26 97 aa9.37□□□□□ -0.91
SCAMP2-204ENST00000563829 LOC107984640A0A0U1RRK4 108 aa9.36□□□□□ -0.91
SCAMP2-204ENST00000563829 RBAKDNA6NC62 111 aa9.36□□□□□ -0.91
SCAMP2-204ENST00000563829 DYNLRB1Q9NP97 96 aa9.36□□□□□ -0.91
SCAMP2-204ENST00000563829 RIF1Q5UIP0 2472 aaKnown RBP9.36□□□□□ -0.91
SCAMP2-204ENST00000563829 TRAV17A0A0B4J275 112 aa9.36□□□□□ -0.91
SCAMP2-204ENST00000563829 FAM236AA0A1B0GUQ0 79 aa9.36□□□□□ -0.91
SCAMP2-204ENST00000563829 FAM236BA0A1B0GV22 79 aa9.36□□□□□ -0.91
SCAMP2-204ENST00000563829 BUB3O43684 328 aa9.36□□□□□ -0.91
SCAMP2-204ENST00000563829 PRSS2P07478 247 aa9.36□□□□□ -0.91
SCAMP2-204ENST00000563829 BSPH1Q075Z2 132 aa9.36□□□□□ -0.91
SCAMP2-204ENST00000563829 TRGV11A0A075B6L2 103 aa9.35□□□□□ -0.91
SCAMP2-204ENST00000563829 RNF5Q99942 180 aa9.35□□□□□ -0.91
SCAMP2-204ENST00000563829 FAM215AQ9Y5M1 114 aa9.35□□□□□ -0.91
SCAMP2-204ENST00000563829 BDP1A6H8Y1 2624 aa9.35□□□□□ -0.91
SCAMP2-204ENST00000563829 A0A0B4J2C4 111 aa9.35□□□□□ -0.91
SCAMP2-204ENST00000563829 IGIPA6NJ69 53 aa9.35□□□□□ -0.91
SCAMP2-204ENST00000563829 OOSP1A8MZH6 123 aa9.35□□□□□ -0.91
SCAMP2-204ENST00000563829 H7C423 109 aa9.35□□□□□ -0.91
SCAMP2-204ENST00000563829 ZNF22P17026 224 aaPredicted RBP9.35□□□□□ -0.91
SCAMP2-204ENST00000563829 NUP37Q8NFH4 326 aa9.35□□□□□ -0.91
SCAMP2-204ENST00000563829 ADARB2-AS1A8MUL3 147 aa9.34□□□□□ -0.91
SCAMP2-204ENST00000563829 MRPL23Q16540 153 aaKnown RBP9.34□□□□□ -0.91
SCAMP2-204ENST00000563829 OPRPNQ99935 248 aaPredicted RBP9.34□□□□□ -0.91
SCAMP2-204ENST00000563829 KAAG1Q9UBP8 84 aa9.34□□□□□ -0.91
SCAMP2-204ENST00000563829 PTPRZ1P23471 2315 aaPredicted RBP9.34□□□□□ -0.91
SCAMP2-204ENST00000563829 C9orf153Q5TBE3 101 aa9.34□□□□□ -0.91
SCAMP2-204ENST00000563829 CLEC2BQ92478 149 aa9.34□□□□□ -0.91
SCAMP2-204ENST00000563829 MED13LQ71F56 2210 aa9.34□□□□□ -0.91
SCAMP2-204ENST00000563829 DEFB1P60022 68 aa9.33□□□□□ -0.92
SCAMP2-204ENST00000563829 CEMP1Q6PRD7 247 aaPredicted RBP9.33□□□□□ -0.92
SCAMP2-204ENST00000563829 GPHB5Q86YW7 130 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms