RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 DPH3P1Q9H4G8 78 aa8.08□□□□□ -1.12
RNF40-204ENST00000563683 TMEM95Q3KNT9 176 aa8.07□□□□□ -1.12
RNF40-204ENST00000563683 IGHV3-73A0A0B4J1V6 119 aa8.07□□□□□ -1.12
RNF40-204ENST00000563683 H3BMG7 143 aa8.07□□□□□ -1.12
RNF40-204ENST00000563683 LGALS3P17931 250 aaKnown RBP8.07□□□□□ -1.12
RNF40-204ENST00000563683 HHLA3Q9XRX5 114 aa8.07□□□□□ -1.12
RNF40-204ENST00000563683 CYSLTR1Q9Y271 337 aa8.07□□□□□ -1.12
RNF40-204ENST00000563683 IGKV2D-26A0A0A0MRZ7 120 aa8.07□□□□□ -1.12
RNF40-204ENST00000563683 TMEM8BA6NDV4 472 aa8.07□□□□□ -1.12
RNF40-204ENST00000563683 A6NJY4 79 aa8.07□□□□□ -1.12
RNF40-204ENST00000563683 C12orf74Q32Q52 190 aa8.07□□□□□ -1.12
RNF40-204ENST00000563683 ANXA2RQ3ZCQ2 193 aa8.07□□□□□ -1.12
RNF40-204ENST00000563683 MRPL16Q9NX20 251 aaKnown RBP8.07□□□□□ -1.12
RNF40-204ENST00000563683 RNF223E7ERA6 249 aa8.06□□□□□ -1.12
RNF40-204ENST00000563683 ABCA12Q86UK0 2595 aa8.06□□□□□ -1.12
RNF40-204ENST00000563683 SH2D6Q7Z4S9 175 aa8.06□□□□□ -1.12
RNF40-204ENST00000563683 RAX2Q96IS3 184 aa8.06□□□□□ -1.12
RNF40-204ENST00000563683 A0A1B0GWB2 263 aa8.06□□□□□ -1.12
RNF40-204ENST00000563683 LY6LH3BQJ8 138 aa8.06□□□□□ -1.12
RNF40-204ENST00000563683 TNFRSF13BO14836 293 aaPredicted RBP8.06□□□□□ -1.12
RNF40-204ENST00000563683 ZNF80P51504 273 aaPredicted RBP8.06□□□□□ -1.12
RNF40-204ENST00000563683 BEX4Q9NWD9 120 aaPredicted RBP8.06□□□□□ -1.12
RNF40-204ENST00000563683 IGHV3-64A0A075B6Q5 118 aa8.05□□□□□ -1.12
RNF40-204ENST00000563683 TRAV12-2A0A075B6T6 113 aa8.05□□□□□ -1.12
RNF40-204ENST00000563683 Q71RC1 249 aaPredicted RBP8.05□□□□□ -1.12
RNF40-204ENST00000563683 LINC01587Q99440 93 aa8.05□□□□□ -1.12
RNF40-204ENST00000563683 SIRPDQ9H106 197 aa8.05□□□□□ -1.12
RNF40-204ENST00000563683 GEMIN7Q9H840 131 aaKnown RBP8.05□□□□□ -1.12
RNF40-204ENST00000563683 TNFRSF18Q9Y5U5 241 aa8.05□□□□□ -1.12
RNF40-204ENST00000563683 IGHV4-30-2A0A087WSY4 118 aa8.05□□□□□ -1.12
RNF40-204ENST00000563683 LINC01546A6NGU7 62 aa8.05□□□□□ -1.12
RNF40-204ENST00000563683 PRSS47A8MTI9 375 aa8.05□□□□□ -1.12
RNF40-204ENST00000563683 RRN3P1Q2M238 152 aa8.05□□□□□ -1.12
RNF40-204ENST00000563683 ZNF48Q96MX3 618 aaPredicted RBP8.05□□□□□ -1.12
RNF40-204ENST00000563683 ZNF815PA8K554 130 aa8.04□□□□□ -1.12
RNF40-204ENST00000563683 NDUFA4O00483 81 aa8.04□□□□□ -1.12
RNF40-204ENST00000563683 GNRH2O43555 120 aa8.04□□□□□ -1.12
RNF40-204ENST00000563683 SPINK13Q1W4C9 94 aa8.04□□□□□ -1.12
RNF40-204ENST00000563683 TTTY13Q9BZ97 58 aa8.04□□□□□ -1.12
RNF40-204ENST00000563683 ODF3BA8MYP8 253 aa8.04□□□□□ -1.12
RNF40-204ENST00000563683 C19orf84I3L1E1 186 aa8.04□□□□□ -1.12
RNF40-204ENST00000563683 YAE1D1Q9NRH1 226 aa8.04□□□□□ -1.12
RNF40-204ENST00000563683 MRPL35Q9NZE8 188 aaKnown RBP8.04□□□□□ -1.12
RNF40-204ENST00000563683 ZNF292O60281 2723 aa8.04□□□□□ -1.12
RNF40-204ENST00000563683 TRAV26-1A0A087WT03 109 aa8.04□□□□□ -1.12
RNF40-204ENST00000563683 DSCR9P59020 149 aa8.04□□□□□ -1.12
RNF40-204ENST00000563683 SUMO2P61956 95 aaKnown RBP8.04□□□□□ -1.12
RNF40-204ENST00000563683 LMO4P61968 165 aa8.04□□□□□ -1.12
RNF40-204ENST00000563683 C5orf56Q8N8D9 126 aa8.04□□□□□ -1.12
RNF40-204ENST00000563683 ATP6V0E2Q8NHE4 81 aa8.04□□□□□ -1.12
RNF40-204ENST00000563683 LYRM7Q5U5X0 104 aa8.03□□□□□ -1.12
RNF40-204ENST00000563683 Q8N8P6 123 aa8.03□□□□□ -1.12
RNF40-204ENST00000563683 TRBV12-3P01733 135 aa8.03□□□□□ -1.12
RNF40-204ENST00000563683 PRB1P04280 392 aa8.03□□□□□ -1.12
RNF40-204ENST00000563683 CRYBA4P53673 196 aa8.03□□□□□ -1.12
RNF40-204ENST00000563683 MRGPRG-AS1Q2M3A8 158 aa8.03□□□□□ -1.12
RNF40-204ENST00000563683 VCX2Q9H322 139 aa8.03□□□□□ -1.12
RNF40-204ENST00000563683 KLK9Q9UKQ9 250 aa8.03□□□□□ -1.12
RNF40-204ENST00000563683 HIVEP2P31629 2446 aa8.03□□□□□ -1.12
RNF40-204ENST00000563683 MAP1AP78559 2803 aaPredicted RBP8.03□□□□□ -1.12
RNF40-204ENST00000563683 IGHV4-59P01825 116 aa8.03□□□□□ -1.12
RNF40-204ENST00000563683 PLNP26678 52 aa8.03□□□□□ -1.12
RNF40-204ENST00000563683 ZNF876PQ49A33 203 aa8.03□□□□□ -1.12
RNF40-204ENST00000563683 AMTNQ6UX39 209 aa8.03□□□□□ -1.12
RNF40-204ENST00000563683 C2orf66Q6UXQ4 117 aa8.03□□□□□ -1.12
RNF40-204ENST00000563683 UNQ9165/PRO28630Q6UXU0 137 aa8.03□□□□□ -1.12
RNF40-204ENST00000563683 COX8CQ7Z4L0 72 aa8.03□□□□□ -1.12
RNF40-204ENST00000563683 TEX29Q8N6K0 151 aa8.03□□□□□ -1.12
RNF40-204ENST00000563683 ZNF418Q8TF45 676 aaPredicted RBP8.03□□□□□ -1.12
RNF40-204ENST00000563683 IGKV3OR2-268A0A0C4DH90 116 aa8.02□□□□□ -1.13
RNF40-204ENST00000563683 H7C1H1 209 aa8.02□□□□□ -1.13
RNF40-204ENST00000563683 SRSF2Q01130 221 aaKnown RBP8.02□□□□□ -1.13
RNF40-204ENST00000563683 IGKV3D-20A0A0C4DH25 116 aa8.02□□□□□ -1.13
RNF40-204ENST00000563683 LINC01356Q8N9X3 169 aa8.02□□□□□ -1.13
RNF40-204ENST00000563683 RAI1Q7Z5J4 1906 aaPredicted RBP8.02□□□□□ -1.13
RNF40-204ENST00000563683 HOXA3O43365 443 aaPredicted RBP8.02□□□□□ -1.13
RNF40-204ENST00000563683 DUSP14O95147 198 aaKnown RBP8.02□□□□□ -1.13
RNF40-204ENST00000563683 IGLC6P0CF74 106 aa8.02□□□□□ -1.13
RNF40-204ENST00000563683 C1QTNF4Q9BXJ3 329 aa8.02□□□□□ -1.13
RNF40-204ENST00000563683 KNCNA6PVL3 124 aa8.01□□□□□ -1.13
RNF40-204ENST00000563683 LINC01619G3V211 115 aa8.01□□□□□ -1.13
RNF40-204ENST00000563683 SPINK8P0C7L1 97 aa8.01□□□□□ -1.13
RNF40-204ENST00000563683 FOXI1Q12951 378 aa8.01□□□□□ -1.13
RNF40-204ENST00000563683 DEFB112Q30KQ8 113 aa8.01□□□□□ -1.13
RNF40-204ENST00000563683 RNF185Q96GF1 192 aa8.01□□□□□ -1.13
RNF40-204ENST00000563683 CCDC140Q96MF4 163 aa8.01□□□□□ -1.13
RNF40-204ENST00000563683 IGHV7-4-1A0A0J9YVY3 117 aa8.01□□□□□ -1.13
RNF40-204ENST00000563683 SLC25A16P16260 332 aa8.01□□□□□ -1.13
RNF40-204ENST00000563683 DEFB131AP59861 70 aa8.01□□□□□ -1.13
RNF40-204ENST00000563683 DLX4Q92988 240 aaPredicted RBP8.01□□□□□ -1.13
RNF40-204ENST00000563683 AJUBAQ96IF1 538 aa8.01□□□□□ -1.13
RNF40-204ENST00000563683 PKD1L2Q7Z442 2459 aa8.01□□□□□ -1.13
RNF40-204ENST00000563683 MTORP42345 2549 aa8□□□□□ -1.13
RNF40-204ENST00000563683 SMIM2Q9BVW6 85 aa8□□□□□ -1.13
RNF40-204ENST00000563683 PRO0461Q9UI25 63 aa8□□□□□ -1.13
RNF40-204ENST00000563683 CENPEQ02224 2701 aa8□□□□□ -1.13
RNF40-204ENST00000563683 A0A087WX48 190 aa8□□□□□ -1.13
RNF40-204ENST00000563683 VCYO14598 125 aa8□□□□□ -1.13
RNF40-204ENST00000563683 MRPS12O15235 138 aaKnown RBP8□□□□□ -1.13
RNF40-204ENST00000563683 PAPPA-AS1Q5QFB9 102 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms