RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 OSTCQ9NRP0 149 aa3.41□□□□□ -1.86
SMG1-207ENST00000563235 ANKRD17O75179 2603 aaKnown RBP3.41□□□□□ -1.86
SMG1-207ENST00000563235 HEATR5AQ86XA9 2040 aa3.41□□□□□ -1.86
SMG1-207ENST00000563235 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.4□□□□□ -1.86
SMG1-207ENST00000563235 J3QKU1 62 aa3.4□□□□□ -1.86
SMG1-207ENST00000563235 SSSCA1O60232 199 aa3.4□□□□□ -1.86
SMG1-207ENST00000563235 RBM3P98179 157 aaKnown RBP3.4□□□□□ -1.86
SMG1-207ENST00000563235 LCE1DQ5T752 114 aa3.4□□□□□ -1.86
SMG1-207ENST00000563235 C9orf66Q5T8R8 295 aa3.4□□□□□ -1.86
SMG1-207ENST00000563235 SUMO4Q6EEV6 95 aa3.4□□□□□ -1.86
SMG1-207ENST00000563235 OR5AS1Q8N127 324 aa3.4□□□□□ -1.86
SMG1-207ENST00000563235 SLC25A29Q8N8R3 303 aa3.4□□□□□ -1.86
SMG1-207ENST00000563235 C18orf32Q8TCD1 76 aa3.4□□□□□ -1.86
SMG1-207ENST00000563235 LINC00474Q9P2X8 69 aa3.4□□□□□ -1.86
SMG1-207ENST00000563235 MDC1Q14676 2089 aaKnown RBP3.4□□□□□ -1.86
SMG1-207ENST00000563235 BRWD1Q9NSI6 2320 aa3.4□□□□□ -1.86
SMG1-207ENST00000563235 IGLV3-9A0A075B6K5 115 aa3.4□□□□□ -1.87
SMG1-207ENST00000563235 MDFIC2A0A1B0GVS7 189 aa3.4□□□□□ -1.87
SMG1-207ENST00000563235 CRYM-AS1A6NIL9 109 aa3.4□□□□□ -1.87
SMG1-207ENST00000563235 SSR2P43308 183 aa3.4□□□□□ -1.87
SMG1-207ENST00000563235 S100A7L2Q5SY68 101 aa3.4□□□□□ -1.87
SMG1-207ENST00000563235 LINC01590Q5TEZ4 76 aa3.4□□□□□ -1.87
SMG1-207ENST00000563235 Q6P435 159 aa3.4□□□□□ -1.87
SMG1-207ENST00000563235 NUMA1Q14980 2115 aa3.4□□□□□ -1.87
SMG1-207ENST00000563235 A6NN06 94 aa3.4□□□□□ -1.87
SMG1-207ENST00000563235 C3orf79P0CE67 100 aa3.4□□□□□ -1.87
SMG1-207ENST00000563235 HMGA1P17096 107 aaKnown RBP3.4□□□□□ -1.87
SMG1-207ENST00000563235 Q8N7P7 452 aa3.4□□□□□ -1.87
SMG1-207ENST00000563235 SIGLECL1Q8N7X8 197 aa3.4□□□□□ -1.87
SMG1-207ENST00000563235 Q8N8P6 123 aa3.4□□□□□ -1.87
SMG1-207ENST00000563235 Q96M85 177 aa3.4□□□□□ -1.87
SMG1-207ENST00000563235 KIAA2026Q5HYC2 2103 aa3.39□□□□□ -1.87
SMG1-207ENST00000563235 OTOGLQ3ZCN5 2332 aa3.39□□□□□ -1.87
SMG1-207ENST00000563235 IGLV5-39A0A0G2JS06 123 aa3.39□□□□□ -1.87
SMG1-207ENST00000563235 A0A0J9YXY3 114 aa3.39□□□□□ -1.87
SMG1-207ENST00000563235 NTN3O00634 580 aaPredicted RBP3.39□□□□□ -1.87
SMG1-207ENST00000563235 IGLV2-23P01705 113 aa3.39□□□□□ -1.87
SMG1-207ENST00000563235 CD28P10747 220 aa3.39□□□□□ -1.87
SMG1-207ENST00000563235 PRR4Q16378 134 aa3.39□□□□□ -1.87
SMG1-207ENST00000563235 CLEC2BQ92478 149 aa3.39□□□□□ -1.87
SMG1-207ENST00000563235 B9D2Q9BPU9 175 aa3.39□□□□□ -1.87
SMG1-207ENST00000563235 CEP250Q9BV73 2442 aa3.39□□□□□ -1.87
SMG1-207ENST00000563235 IGKV3D-20A0A0C4DH25 116 aa3.39□□□□□ -1.87
SMG1-207ENST00000563235 CPSF4LA6NMK7 179 aaKnown RBP3.39□□□□□ -1.87
SMG1-207ENST00000563235 PIRTP0C851 137 aa3.39□□□□□ -1.87
SMG1-207ENST00000563235 SPINK2P20155 84 aa3.39□□□□□ -1.87
SMG1-207ENST00000563235 UBE2AP49459 152 aa3.39□□□□□ -1.87
SMG1-207ENST00000563235 PROK1P58294 105 aa3.39□□□□□ -1.87
SMG1-207ENST00000563235 MRPS36P82909 103 aaKnown RBP3.39□□□□□ -1.87
SMG1-207ENST00000563235 RPL18Q07020 188 aaKnown RBP3.39□□□□□ -1.87
SMG1-207ENST00000563235 MED12LQ86YW9 2145 aa3.39□□□□□ -1.87
SMG1-207ENST00000563235 SMIM7Q9BQ49 75 aa3.39□□□□□ -1.87
SMG1-207ENST00000563235 C8orf17Q9NRJ1 99 aa3.39□□□□□ -1.87
SMG1-207ENST00000563235 PHLDA3Q9Y5J5 127 aa3.39□□□□□ -1.87
SMG1-207ENST00000563235 HELZ2Q9BYK8 2649 aaKnown RBP3.39□□□□□ -1.87
SMG1-207ENST00000563235 EXPH5Q8NEV8 1989 aa3.39□□□□□ -1.87
SMG1-207ENST00000563235 SVILO95425 2214 aa3.38□□□□□ -1.87
SMG1-207ENST00000563235 WDFY4Q6ZS81 3184 aa3.38□□□□□ -1.87
SMG1-207ENST00000563235 LY6G6EA0A0G2JKS1 128 aa3.38□□□□□ -1.87
SMG1-207ENST00000563235 UBE2L5PA0A1B0GUS4 154 aa3.38□□□□□ -1.87
SMG1-207ENST00000563235 TMEM14DPA8MWL7 114 aa3.38□□□□□ -1.87
SMG1-207ENST00000563235 UBE2L3P68036 154 aaKnown RBP3.38□□□□□ -1.87
SMG1-207ENST00000563235 ZNF627Q7L945 461 aa3.38□□□□□ -1.87
SMG1-207ENST00000563235 C15orf53Q8NAA6 179 aa3.38□□□□□ -1.87
SMG1-207ENST00000563235 NUP37Q8NFH4 326 aa3.38□□□□□ -1.87
SMG1-207ENST00000563235 NABP2Q9BQ15 211 aa3.38□□□□□ -1.87
SMG1-207ENST00000563235 HIGD1BQ9P298 99 aa3.38□□□□□ -1.87
SMG1-207ENST00000563235 RABAC1Q9UI14 185 aa3.38□□□□□ -1.87
SMG1-207ENST00000563235 EML5Q05BV3 1969 aa3.38□□□□□ -1.87
SMG1-207ENST00000563235 OBSL1O75147 1896 aa3.38□□□□□ -1.87
SMG1-207ENST00000563235 A0A087WW49 117 aa3.38□□□□□ -1.87
SMG1-207ENST00000563235 IGHV3-72A0A0B4J1Y9 119 aa3.38□□□□□ -1.87
SMG1-207ENST00000563235 IGHV5-51A0A0C4DH38 117 aa3.38□□□□□ -1.87
SMG1-207ENST00000563235 A0A1W2PQD3 144 aa3.38□□□□□ -1.87
SMG1-207ENST00000563235 A0A1W2PS18 150 aa3.38□□□□□ -1.87
SMG1-207ENST00000563235 PEBP1P30086 187 aaKnown RBP3.38□□□□□ -1.87
SMG1-207ENST00000563235 HERVK_113P61574 105 aa3.38□□□□□ -1.87
SMG1-207ENST00000563235 CEND1Q8N111 149 aa3.38□□□□□ -1.87
SMG1-207ENST00000563235 FAM168AQ92567 244 aa3.38□□□□□ -1.87
SMG1-207ENST00000563235 DEC1Q9P2X7 70 aa3.38□□□□□ -1.87
SMG1-207ENST00000563235 USP9XQ93008 2570 aaPredicted RBP3.38□□□□□ -1.87
SMG1-207ENST00000563235 C16orf97H3BN30 126 aa3.37□□□□□ -1.87
SMG1-207ENST00000563235 TSPEAR-AS2P59090 65 aa3.37□□□□□ -1.87
SMG1-207ENST00000563235 KRTDAPP60985 99 aa3.37□□□□□ -1.87
SMG1-207ENST00000563235 SERF2P84101 59 aa3.37□□□□□ -1.87
SMG1-207ENST00000563235 GNG13Q9P2W3 67 aa3.37□□□□□ -1.87
SMG1-207ENST00000563235 Q9Y3F1 56 aa3.37□□□□□ -1.87
SMG1-207ENST00000563235 IGHV4-30-2A0A087WSY4 118 aa3.37□□□□□ -1.87
SMG1-207ENST00000563235 IGHV3-74A0A0B4J1X5 117 aa3.37□□□□□ -1.87
SMG1-207ENST00000563235 IGHV3-35A0A0C4DH35 117 aa3.37□□□□□ -1.87
SMG1-207ENST00000563235 BMPR1BO00238 502 aa3.37□□□□□ -1.87
SMG1-207ENST00000563235 PFN4Q8NHR9 129 aa3.37□□□□□ -1.87
SMG1-207ENST00000563235 LY96Q9Y6Y9 160 aa3.37□□□□□ -1.87
SMG1-207ENST00000563235 CHD7Q9P2D1 2997 aa3.37□□□□□ -1.87
SMG1-207ENST00000563235 IGLV4-3A0A075B6K6 122 aa3.37□□□□□ -1.87
SMG1-207ENST00000563235 C2orf70A6NJV1 201 aa3.37□□□□□ -1.87
SMG1-207ENST00000563235 PRAC2D3DTV9 90 aa3.37□□□□□ -1.87
SMG1-207ENST00000563235 C5orf67F2Z3F1 127 aa3.37□□□□□ -1.87
SMG1-207ENST00000563235 CCKP06307 115 aa3.37□□□□□ -1.87
SMG1-207ENST00000563235 CCL4P13236 92 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms