RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 MBP02144 154 aa9.67□□□□□ -0.86
SPG7-205ENST00000561945 LINC00694P0DN24 101 aa9.67□□□□□ -0.86
SPG7-205ENST00000561945 MGST1P10620 155 aaKnown RBP9.67□□□□□ -0.86
SPG7-205ENST00000561945 SERF2P84101 59 aa9.67□□□□□ -0.86
SPG7-205ENST00000561945 PIK3CD-AS1Q5SR53 167 aa9.67□□□□□ -0.86
SPG7-205ENST00000561945 C5orf17Q8NAS9 161 aa9.67□□□□□ -0.86
SPG7-205ENST00000561945 NDFIP1Q9BT67 221 aa9.67□□□□□ -0.86
SPG7-205ENST00000561945 PSMG3Q9BT73 122 aaPredicted RBP9.67□□□□□ -0.86
SPG7-205ENST00000561945 GTSF1LQ9H1H1 148 aa9.67□□□□□ -0.86
SPG7-205ENST00000561945 FAM30AQ9NZY2 134 aa9.67□□□□□ -0.86
SPG7-205ENST00000561945 RNF222A6NCQ9 220 aa9.66□□□□□ -0.86
SPG7-205ENST00000561945 ARPC5O15511 151 aa9.66□□□□□ -0.86
SPG7-205ENST00000561945 ARL14EPLP0DKL9 152 aa9.66□□□□□ -0.86
SPG7-205ENST00000561945 RNASE3P12724 160 aaKnown RBP9.66□□□□□ -0.86
SPG7-205ENST00000561945 OR10J3Q5JRS4 329 aa9.66□□□□□ -0.86
SPG7-205ENST00000561945 ZNF506Q5JVG8 444 aa9.66□□□□□ -0.86
SPG7-205ENST00000561945 OR10G9Q8NGN4 311 aa9.66□□□□□ -0.86
SPG7-205ENST00000561945 OR10G7Q8NGN6 311 aa9.66□□□□□ -0.86
SPG7-205ENST00000561945 PGPEP1LA6NFU8 196 aa9.65□□□□□ -0.86
SPG7-205ENST00000561945 ATP6V0CP27449 155 aa9.65□□□□□ -0.86
SPG7-205ENST00000561945 RPL7L1Q6DKI1 246 aaKnown RBP9.65□□□□□ -0.86
SPG7-205ENST00000561945 ZFP2Q6ZN57 461 aa9.65□□□□□ -0.86
SPG7-205ENST00000561945 ATP6V0E2Q8NHE4 81 aa9.65□□□□□ -0.86
SPG7-205ENST00000561945 PSG8Q9UQ74 426 aa9.65□□□□□ -0.86
SPG7-205ENST00000561945 HMSDA8MTL9 139 aa9.64□□□□□ -0.87
SPG7-205ENST00000561945 G3V3Q6 166 aa9.64□□□□□ -0.87
SPG7-205ENST00000561945 GCGP01275 180 aa9.64□□□□□ -0.87
SPG7-205ENST00000561945 CDC34P49427 236 aaPredicted RBP9.64□□□□□ -0.87
SPG7-205ENST00000561945 TMEM75Q8N9X5 138 aa9.64□□□□□ -0.87
SPG7-205ENST00000561945 TM2D2Q9BX73 214 aa9.64□□□□□ -0.87
SPG7-205ENST00000561945 SH3BGRL3Q9H299 93 aa9.64□□□□□ -0.87
SPG7-205ENST00000561945 Q9HAA7 133 aa9.64□□□□□ -0.87
SPG7-205ENST00000561945 GGTLC3B5MD39 225 aa9.63□□□□□ -0.87
SPG7-205ENST00000561945 SMLR1H3BR10 107 aa9.63□□□□□ -0.87
SPG7-205ENST00000561945 K7EQM0 130 aa9.63□□□□□ -0.87
SPG7-205ENST00000561945 HMGB3O15347 200 aaKnown RBP9.63□□□□□ -0.87
SPG7-205ENST00000561945 IGHV3-30P01768 117 aa9.63□□□□□ -0.87
SPG7-205ENST00000561945 IGHV3-33P01772 117 aa9.63□□□□□ -0.87
SPG7-205ENST00000561945 IGHV3-30-3P0DP02 117 aa9.63□□□□□ -0.87
SPG7-205ENST00000561945 IGHV3-30-5P0DP03 117 aa9.63□□□□□ -0.87
SPG7-205ENST00000561945 WFDC2Q14508 124 aa9.63□□□□□ -0.87
SPG7-205ENST00000561945 SMUG1Q53HV7 270 aa9.63□□□□□ -0.87
SPG7-205ENST00000561945 UFSP1Q6NVU6 142 aa9.63□□□□□ -0.87
SPG7-205ENST00000561945 RAB24Q969Q5 203 aa9.63□□□□□ -0.87
SPG7-205ENST00000561945 SGK494Q96LW2 274 aa9.63□□□□□ -0.87
SPG7-205ENST00000561945 PARLQ9H300 379 aa9.63□□□□□ -0.87
SPG7-205ENST00000561945 EPDR1Q9UM22 224 aa9.63□□□□□ -0.87
SPG7-205ENST00000561945 IGHV3-73A0A0B4J1V6 119 aa9.62□□□□□ -0.87
SPG7-205ENST00000561945 A0A0D9SG52 128 aa9.62□□□□□ -0.87
SPG7-205ENST00000561945 GCHFRP30047 84 aa9.62□□□□□ -0.87
SPG7-205ENST00000561945 FLI1Q01543 452 aaPredicted RBP9.62□□□□□ -0.87
SPG7-205ENST00000561945 SAPCD1Q5SSQ6 148 aa9.62□□□□□ -0.87
SPG7-205ENST00000561945 Q6ZNX1 250 aa9.62□□□□□ -0.87
SPG7-205ENST00000561945 KCNRGQ8N5I3 272 aa9.62□□□□□ -0.87
SPG7-205ENST00000561945 LINC00479Q96M42 142 aa9.62□□□□□ -0.87
SPG7-205ENST00000561945 ACTR3CQ9C0K3 210 aaPredicted RBP9.62□□□□□ -0.87
SPG7-205ENST00000561945 TRAV8-3A0A0A6YYJ7 113 aa9.61□□□□□ -0.87
SPG7-205ENST00000561945 IGKV3D-20A0A0C4DH25 116 aa9.61□□□□□ -0.87
SPG7-205ENST00000561945 A8MWV9 139 aa9.61□□□□□ -0.87
SPG7-205ENST00000561945 SUMO1P63165 101 aaKnown RBP9.61□□□□□ -0.87
SPG7-205ENST00000561945 ZNF345Q14585 488 aa9.61□□□□□ -0.87
SPG7-205ENST00000561945 ZFP69Q49AA0 526 aa9.61□□□□□ -0.87
SPG7-205ENST00000561945 CYB561D1Q8N8Q1 229 aa9.61□□□□□ -0.87
SPG7-205ENST00000561945 TMEM167BQ9NRX6 74 aa9.61□□□□□ -0.87
SPG7-205ENST00000561945 PKHD1L1Q86WI1 4243 aa9.61□□□□□ -0.87
SPG7-205ENST00000561945 KANTRA0A1W2PQU2 76 aa9.6□□□□□ -0.87
SPG7-205ENST00000561945 A0A1W2PRE2 83 aa9.6□□□□□ -0.87
SPG7-205ENST00000561945 EIF5AP63241 154 aaKnown RBP9.6□□□□□ -0.87
SPG7-205ENST00000561945 DNLZQ5SXM8 178 aa9.6□□□□□ -0.87
SPG7-205ENST00000561945 AKR1C8PQ5T2L2 129 aa9.6□□□□□ -0.87
SPG7-205ENST00000561945 Q8N3U1 123 aa9.6□□□□□ -0.87
SPG7-205ENST00000561945 IL36BQ9NZH7 164 aa9.6□□□□□ -0.87
SPG7-205ENST00000561945 A0A087WWC5 75 aa9.59□□□□□ -0.87
SPG7-205ENST00000561945 KRTAP29-1A8MX34 341 aaPredicted RBP9.59□□□□□ -0.87
SPG7-205ENST00000561945 CXorf1O96002 111 aa9.59□□□□□ -0.87
SPG7-205ENST00000561945 PLA2G1BP04054 148 aaKnown RBP9.59□□□□□ -0.87
SPG7-205ENST00000561945 TOR2AQ5JU69 321 aa9.59□□□□□ -0.87
SPG7-205ENST00000561945 PRNTQ86SH4 94 aa9.59□□□□□ -0.87
SPG7-205ENST00000561945 OR11H4Q8NGC9 324 aa9.59□□□□□ -0.87
SPG7-205ENST00000561945 CYTL1Q9NRR1 136 aa9.59□□□□□ -0.87
SPG7-205ENST00000561945 COX11Q9Y6N1 276 aa9.59□□□□□ -0.87
SPG7-205ENST00000561945 PFDN1O60925 122 aa9.58□□□□□ -0.88
SPG7-205ENST00000561945 COX8CQ7Z4L0 72 aa9.58□□□□□ -0.88
SPG7-205ENST00000561945 DAZ4Q86SG3 579 aaKnown RBP9.58□□□□□ -0.88
SPG7-205ENST00000561945 DAZ3Q9NR90 486 aaKnown RBP9.58□□□□□ -0.88
SPG7-205ENST00000561945 Q9UF83 564 aa9.58□□□□□ -0.88
SPG7-205ENST00000561945 CTXND1A0A1B0GTU2 59 aa9.57□□□□□ -0.88
SPG7-205ENST00000561945 FABP5P3A8MUU1 101 aa9.57□□□□□ -0.88
SPG7-205ENST00000561945 FGF8P55075 233 aaPredicted RBP9.57□□□□□ -0.88
SPG7-205ENST00000561945 TCTE3Q8IZS6 198 aa9.57□□□□□ -0.88
SPG7-205ENST00000561945 ZNF471Q9BX82 626 aaPredicted RBP9.57□□□□□ -0.88
SPG7-205ENST00000561945 ARL2-SNX15V9GYD0 113 aa9.57□□□□□ -0.88
SPG7-205ENST00000561945 GAGE12JA6NER3 117 aa9.56□□□□□ -0.88
SPG7-205ENST00000561945 BCL2L11O43521 198 aa9.56□□□□□ -0.88
SPG7-205ENST00000561945 ASIPP42127 132 aa9.56□□□□□ -0.88
SPG7-205ENST00000561945 KRTAP10-4P60372 401 aaPredicted RBP9.56□□□□□ -0.88
SPG7-205ENST00000561945 GAGE1Q13065 139 aa9.56□□□□□ -0.88
SPG7-205ENST00000561945 GAGE4Q13068 117 aa9.56□□□□□ -0.88
SPG7-205ENST00000561945 GAGE5Q13069 117 aa9.56□□□□□ -0.88
SPG7-205ENST00000561945 GAGE13Q4V321 117 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms