RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 PRO0628Q9UI54 55 aa5.6□□□□□ -1.51
CDH1-203ENST00000561751 URB1O60287 2271 aaKnown RBP5.6□□□□□ -1.51
CDH1-203ENST00000561751 PTPRQQ9UMZ3 2332 aa5.59□□□□□ -1.51
CDH1-203ENST00000561751 A0A0G2JNJ9 132 aa5.59□□□□□ -1.51
CDH1-203ENST00000561751 RBAKDNA6NC62 111 aa5.59□□□□□ -1.51
CDH1-203ENST00000561751 SDHAF1A6NFY7 115 aa5.59□□□□□ -1.51
CDH1-203ENST00000561751 LINC01548A6NM66 108 aa5.59□□□□□ -1.51
CDH1-203ENST00000561751 WNT9BO14905 357 aa5.59□□□□□ -1.51
CDH1-203ENST00000561751 MRPS12O15235 138 aaKnown RBP5.59□□□□□ -1.51
CDH1-203ENST00000561751 SCRG1O75711 98 aa5.59□□□□□ -1.51
CDH1-203ENST00000561751 ZNF56Q15929 161 aa5.59□□□□□ -1.51
CDH1-203ENST00000561751 VMA21Q3ZAQ7 101 aa5.59□□□□□ -1.51
CDH1-203ENST00000561751 TMEM155Q4W5P6 130 aa5.59□□□□□ -1.51
CDH1-203ENST00000561751 MBNL2Q5VZF2 373 aaKnown RBP5.59□□□□□ -1.51
CDH1-203ENST00000561751 GUSBP11Q6P575 273 aa5.59□□□□□ -1.51
CDH1-203ENST00000561751 C2orf82Q6UX34 121 aa5.59□□□□□ -1.51
CDH1-203ENST00000561751 TRPT1Q86TN4 253 aaKnown RBP5.59□□□□□ -1.51
CDH1-203ENST00000561751 C2orf48Q96LS8 159 aa5.59□□□□□ -1.51
CDH1-203ENST00000561751 METTL26Q96S19 204 aa5.59□□□□□ -1.51
CDH1-203ENST00000561751 DYNLRB1Q9NP97 96 aa5.59□□□□□ -1.51
CDH1-203ENST00000561751 OBP2BQ9NPH6 170 aa5.59□□□□□ -1.51
CDH1-203ENST00000561751 PEMTQ9UBM1 199 aa5.59□□□□□ -1.51
CDH1-203ENST00000561751 Q9UFV3 132 aa5.59□□□□□ -1.51
CDH1-203ENST00000561751 RPUSD1Q9UJJ7 312 aaKnown RBP5.59□□□□□ -1.51
CDH1-203ENST00000561751 FAM236AA0A1B0GUQ0 79 aa5.58□□□□□ -1.52
CDH1-203ENST00000561751 FAM236BA0A1B0GV22 79 aa5.58□□□□□ -1.52
CDH1-203ENST00000561751 IGHV3-13P01766 116 aa5.58□□□□□ -1.52
CDH1-203ENST00000561751 PF4P02776 101 aa5.58□□□□□ -1.52
CDH1-203ENST00000561751 ELANEP08246 267 aa5.58□□□□□ -1.52
CDH1-203ENST00000561751 MALP21145 153 aa5.58□□□□□ -1.52
CDH1-203ENST00000561751 CCL8P80075 99 aa5.58□□□□□ -1.52
CDH1-203ENST00000561751 MDP1Q86V88 176 aa5.58□□□□□ -1.52
CDH1-203ENST00000561751 DAND5Q8N907 189 aa5.58□□□□□ -1.52
CDH1-203ENST00000561751 SMIM2Q9BVW6 85 aa5.58□□□□□ -1.52
CDH1-203ENST00000561751 AGPAT4-IT1Q9H0P7 198 aa5.58□□□□□ -1.52
CDH1-203ENST00000561751 ZNF256Q9Y2P7 627 aaPredicted RBP5.58□□□□□ -1.52
CDH1-203ENST00000561751 IGKV1D-17A0A075B6S4 117 aa5.57□□□□□ -1.52
CDH1-203ENST00000561751 TMSB15BA0A087X1C1 80 aa5.57□□□□□ -1.52
CDH1-203ENST00000561751 LOC107984640A0A0U1RRK4 108 aa5.57□□□□□ -1.52
CDH1-203ENST00000561751 TEX49A0A1B0GTD5 131 aa5.57□□□□□ -1.52
CDH1-203ENST00000561751 CGB1A6NKQ9 187 aa5.57□□□□□ -1.52
CDH1-203ENST00000561751 OOSP1A8MZH6 123 aa5.57□□□□□ -1.52
CDH1-203ENST00000561751 SMKR1H3BMG3 65 aa5.57□□□□□ -1.52
CDH1-203ENST00000561751 LHBP01229 141 aa5.57□□□□□ -1.52
CDH1-203ENST00000561751 EGR2P11161 476 aaPredicted RBP5.57□□□□□ -1.52
CDH1-203ENST00000561751 COX6A1P12074 109 aa5.57□□□□□ -1.52
CDH1-203ENST00000561751 PSMB8P28062 276 aa5.57□□□□□ -1.52
CDH1-203ENST00000561751 EFNA4P52798 201 aa5.57□□□□□ -1.52
CDH1-203ENST00000561751 FXYD7P58549 80 aa5.57□□□□□ -1.52
CDH1-203ENST00000561751 IL11RAQ14626 422 aa5.57□□□□□ -1.52
CDH1-203ENST00000561751 HES3Q5TGS1 186 aa5.57□□□□□ -1.52
CDH1-203ENST00000561751 EXOC3-AS1Q8N2X6 119 aa5.57□□□□□ -1.52
CDH1-203ENST00000561751 ZNF843Q8N446 348 aa5.57□□□□□ -1.52
CDH1-203ENST00000561751 KLF14Q8TD94 323 aaPredicted RBP5.57□□□□□ -1.52
CDH1-203ENST00000561751 RNF5Q99942 180 aa5.57□□□□□ -1.52
CDH1-203ENST00000561751 USP9XQ93008 2570 aaPredicted RBP5.57□□□□□ -1.52
CDH1-203ENST00000561751 AHCTF1Q8WYP5 2266 aa5.57□□□□□ -1.52
CDH1-203ENST00000561751 EPM2AB3EWF7 344 aa5.56□□□□□ -1.52
CDH1-203ENST00000561751 H7C423 109 aa5.56□□□□□ -1.52
CDH1-203ENST00000561751 LST1O00453 97 aa5.56□□□□□ -1.52
CDH1-203ENST00000561751 NTN3O00634 580 aaPredicted RBP5.56□□□□□ -1.52
CDH1-203ENST00000561751 PLAUP00749 431 aa5.56□□□□□ -1.52
CDH1-203ENST00000561751 ZNF575Q86XF7 245 aa5.56□□□□□ -1.52
CDH1-203ENST00000561751 FAM216BQ8N7L0 139 aa5.56□□□□□ -1.52
CDH1-203ENST00000561751 C1orf162Q8NEQ5 155 aaPredicted RBP5.56□□□□□ -1.52
CDH1-203ENST00000561751 PLEKHB2Q96CS7 222 aa5.56□□□□□ -1.52
CDH1-203ENST00000561751 TIMM17AQ99595 171 aa5.56□□□□□ -1.52
CDH1-203ENST00000561751 VKORC1Q9BQB6 163 aa5.56□□□□□ -1.52
CDH1-203ENST00000561751 PRORYQ9H606 182 aa5.56□□□□□ -1.52
CDH1-203ENST00000561751 TET2Q6N021 2002 aaPredicted RBP5.56□□□□□ -1.52
CDH1-203ENST00000561751 COL6A6A6NMZ7 2263 aa5.56□□□□□ -1.52
CDH1-203ENST00000561751 SEC16AO15027 2179 aa5.56□□□□□ -1.52
CDH1-203ENST00000561751 TMEM223A0PJW6 202 aa5.55□□□□□ -1.52
CDH1-203ENST00000561751 J3QKU1 62 aa5.55□□□□□ -1.52
CDH1-203ENST00000561751 LEPROTO15243 131 aa5.55□□□□□ -1.52
CDH1-203ENST00000561751 BCE1O60756 84 aa5.55□□□□□ -1.52
CDH1-203ENST00000561751 NDUFC2O95298 119 aa5.55□□□□□ -1.52
CDH1-203ENST00000561751 IGLV2-23P01705 113 aa5.55□□□□□ -1.52
CDH1-203ENST00000561751 IGKV1-16P04430 117 aa5.55□□□□□ -1.52
CDH1-203ENST00000561751 CRIP2P52943 208 aaPredicted RBP5.55□□□□□ -1.52
CDH1-203ENST00000561751 SERP2Q8N6R1 65 aa5.55□□□□□ -1.52
CDH1-203ENST00000561751 COPS9Q8WXC6 57 aa5.55□□□□□ -1.52
CDH1-203ENST00000561751 MRPL53Q96EL3 112 aaKnown RBP5.55□□□□□ -1.52
CDH1-203ENST00000561751 DCTN5Q9BTE1 182 aa5.55□□□□□ -1.52
CDH1-203ENST00000561751 EDA2RQ9HAV5 297 aa5.55□□□□□ -1.52
CDH1-203ENST00000561751 MRPL36Q9P0J6 103 aaKnown RBP5.55□□□□□ -1.52
CDH1-203ENST00000561751 MYO9AB2RTY4 2548 aa5.55□□□□□ -1.52
CDH1-203ENST00000561751 PIEZO2Q9H5I5 2752 aa5.55□□□□□ -1.52
CDH1-203ENST00000561751 DYSFO75923 2080 aa5.54□□□□□ -1.52
CDH1-203ENST00000561751 INAFM2P0DMQ5 153 aa5.54□□□□□ -1.52
CDH1-203ENST00000561751 SUMO2P61956 95 aaKnown RBP5.54□□□□□ -1.52
CDH1-203ENST00000561751 MRPS36P82909 103 aaKnown RBP5.54□□□□□ -1.52
CDH1-203ENST00000561751 FAM222AQ5U5X8 452 aa5.54□□□□□ -1.52
CDH1-203ENST00000561751 Q5XG85 94 aa5.54□□□□□ -1.52
CDH1-203ENST00000561751 ZNF826PQ6ZT77 177 aa5.54□□□□□ -1.52
CDH1-203ENST00000561751 DCANP1Q8TF63 244 aa5.54□□□□□ -1.52
CDH1-203ENST00000561751 C8orf49Q96NF6 230 aa5.54□□□□□ -1.52
CDH1-203ENST00000561751 AMELXQ99217 191 aa5.54□□□□□ -1.52
CDH1-203ENST00000561751 LINC00527Q9UJ94 153 aa5.54□□□□□ -1.52
CDH1-203ENST00000561751 LENEPQ9Y5L5 61 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms