RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 SLC25A5P05141 298 aaKnown RBP2.33□□□□□ -2.04
SPG11-225ENST00000561391 HIST1H2BJP06899 126 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 CXCL1P09341 107 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 HIST1H2BOP23527 126 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 CRYBB3P26998 211 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 HIST1H2BBP33778 126 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 ATP5G3P48201 142 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 HIST1H2BDP58876 126 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 HIST1H2BCP62807 126 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 RANP62826 216 aaKnown RBP2.33□□□□□ -2.04
SPG11-225ENST00000561391 PAFAH1B2P68402 229 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 HIST2H2BEQ16778 126 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 RPEL1Q2QD12 228 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 Q56UQ5 140 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 CENPWQ5EE01 88 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.33□□□□□ -2.04
SPG11-225ENST00000561391 SAPCD1Q5SSQ6 148 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 IBA57Q5T440 356 aaKnown RBP2.33□□□□□ -2.04
SPG11-225ENST00000561391 SPATA31B1PQ5VZV4 182 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 Q6AWC8 147 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 ZNF343Q6P1L6 599 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 PATE2Q6UY27 113 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 Q6ZRP5 223 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 ATP5L2Q7Z4Y8 100 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 BAGE2Q86Y30 109 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 FAM223AQ8IWN6 122 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 TMEM183AQ8IXX5 376 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 ZFP82Q8N141 532 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 OR4B1Q8NGF8 309 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 OR1N2Q8NGR9 330 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 HIST1H2BHQ93079 126 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 FXYD5Q96DB9 178 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 USMG5Q96IX5 58 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 C2orf48Q96LS8 159 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 C12orf57Q99622 126 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 HIST1H2BNQ99877 126 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 HIST1H2BMQ99879 126 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 ALKBH7Q9BT30 221 aaPredicted RBP2.33□□□□□ -2.04
SPG11-225ENST00000561391 SLC25A2Q9BXI2 301 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 GFRA4Q9GZZ7 299 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 ZNF331Q9NQX6 463 aaPredicted RBP2.33□□□□□ -2.04
SPG11-225ENST00000561391 C21orf62Q9NYP8 219 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 MRPL27Q9P0M9 148 aaKnown RBP2.33□□□□□ -2.04
SPG11-225ENST00000561391 CRCT1Q9UGL9 99 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 NAT8BQ9UHF3 227 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 TRAPPC1Q9Y5R8 145 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 SELENOKQ9Y6D0 94 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 FAT1Q14517 4588 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 MUC2Q02817 5179 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 IGLV2-18A0A075B6J9 118 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 TRAV5A0A0B4J249 113 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 A0A0G2JLM5 398 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 SMIM27A0A1W2PRY6 76 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 ZNF705GA8MUZ8 300 aaPredicted RBP2.32□□□□□ -2.04
SPG11-225ENST00000561391 GGTLC3B5MD39 225 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 K7EIM0 57 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 GATCO43716 136 aaKnown RBP2.32□□□□□ -2.04
SPG11-225ENST00000561391 IGKV1-17P01599 117 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 P01737 135 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 HLA-DQA1P01909 254 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 TCRAP04437 139 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 REG1AP05451 166 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 TRGC1P0CF51 173 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 CT45A10P0DMU9 189 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 MGST1P10620 155 aaKnown RBP2.32□□□□□ -2.04
SPG11-225ENST00000561391 RAB4AP20338 218 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 GATA2P23769 480 aaPredicted RBP2.32□□□□□ -2.04
SPG11-225ENST00000561391 BMI1P35226 326 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 MFAP2P55001 183 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 LYZP61626 148 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 SLC35B1P78383 322 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 ATP5G2Q06055 141 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 Q0VG73 95 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 USF2Q15853 346 aaPredicted RBP2.32□□□□□ -2.04
SPG11-225ENST00000561391 OR10J3Q5JRS4 329 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 ACTL10Q5JWF8 245 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 C10orf55Q5SWW7 151 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 UNQ5815/PRO19632Q6UWF5 114 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 LINC00322Q6ZN03 302 aaPredicted RBP2.32□□□□□ -2.04
SPG11-225ENST00000561391 ZNF600Q6ZNG1 722 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 ZNF491Q8N8L2 437 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 TMEM75Q8N9X5 138 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 OR5T1Q8NG75 326 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 TSKUQ8WUA8 353 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 DLX4Q92988 240 aaPredicted RBP2.32□□□□□ -2.04
SPG11-225ENST00000561391 EEF1AKMT3Q96AZ1 226 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 BORCS7Q96B45 105 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 OVOL2Q9BRP0 275 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 SLC25A39Q9BZJ4 359 aaPredicted RBP2.32□□□□□ -2.04
SPG11-225ENST00000561391 ZNF492Q9P255 531 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 RABAC1Q9UI14 185 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 APLNQ9ULZ1 77 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 MOB4Q9Y3A3 225 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 V9GYV3 84 aa2.32□□□□□ -2.04
SPG11-225ENST00000561391 FAT4Q6V0I7 4981 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 DNAH5Q8TE73 4624 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 TRBV20OR9-2A0A075B6H5 130 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 TRBV19A0A075B6N1 114 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 IGHV7-81A0A0B4J1V7 117 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 TRAV41A0A0B4J266 112 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms