RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 MEF2BQ02080 365 aaPredicted RBP9.61□□□□□ -0.87
TPM1-230ENST00000561266 ZNF876PQ49A33 203 aa9.61□□□□□ -0.87
TPM1-230ENST00000561266 ZNRF2Q8NHG8 242 aa9.61□□□□□ -0.87
TPM1-230ENST00000561266 HHLA3Q9XRX5 114 aa9.61□□□□□ -0.87
TPM1-230ENST00000561266 DNAH2Q9P225 4427 aa9.61□□□□□ -0.87
TPM1-230ENST00000561266 H3BVH4 76 aa9.6□□□□□ -0.87
TPM1-230ENST00000561266 S100A9P06702 114 aaKnown RBP9.6□□□□□ -0.87
TPM1-230ENST00000561266 LINC01559Q495D7 138 aa9.6□□□□□ -0.87
TPM1-230ENST00000561266 DNLZQ5SXM8 178 aa9.6□□□□□ -0.87
TPM1-230ENST00000561266 CFAP126Q5VTH2 177 aa9.6□□□□□ -0.87
TPM1-230ENST00000561266 Q6ZSN1 163 aa9.6□□□□□ -0.87
TPM1-230ENST00000561266 OR4C5Q8NGB2 326 aa9.6□□□□□ -0.87
TPM1-230ENST00000561266 PCNPQ8WW12 178 aaKnown RBP9.6□□□□□ -0.87
TPM1-230ENST00000561266 PRO0255Q9UI72 69 aa9.6□□□□□ -0.87
TPM1-230ENST00000561266 IGHV3-73A0A0B4J1V6 119 aa9.59□□□□□ -0.87
TPM1-230ENST00000561266 TRGV4A0A0C4DH28 118 aa9.59□□□□□ -0.87
TPM1-230ENST00000561266 ARMS2P0C7Q2 107 aa9.59□□□□□ -0.87
TPM1-230ENST00000561266 ASIPP42127 132 aa9.59□□□□□ -0.87
TPM1-230ENST00000561266 CENPWQ5EE01 88 aa9.59□□□□□ -0.87
TPM1-230ENST00000561266 DMRTA1Q5VZB9 504 aa9.59□□□□□ -0.87
TPM1-230ENST00000561266 Q6ZR54 194 aa9.59□□□□□ -0.87
TPM1-230ENST00000561266 PTH2Q96A98 100 aa9.59□□□□□ -0.87
TPM1-230ENST00000561266 SAMD10Q9BYL1 202 aa9.59□□□□□ -0.87
TPM1-230ENST00000561266 VAX2Q9UIW0 290 aa9.59□□□□□ -0.87
TPM1-230ENST00000561266 TEX46H3BTG2 121 aa9.58□□□□□ -0.88
TPM1-230ENST00000561266 BLOC1S1P78537 153 aa9.58□□□□□ -0.88
TPM1-230ENST00000561266 PRR27Q6MZM9 219 aa9.58□□□□□ -0.88
TPM1-230ENST00000561266 TXNDC17Q9BRA2 123 aa9.58□□□□□ -0.88
TPM1-230ENST00000561266 SCRT2Q9NQ03 307 aa9.58□□□□□ -0.88
TPM1-230ENST00000561266 MED9Q9NWA0 146 aa9.58□□□□□ -0.88
TPM1-230ENST00000561266 IL36BQ9NZH7 164 aa9.58□□□□□ -0.88
TPM1-230ENST00000561266 DNAH17Q9UFH2 4485 aa9.57□□□□□ -0.88
TPM1-230ENST00000561266 K7EQD1 137 aa9.57□□□□□ -0.88
TPM1-230ENST00000561266 GATA1P15976 413 aaPredicted RBP9.57□□□□□ -0.88
TPM1-230ENST00000561266 S100A4P26447 101 aaKnown RBP9.57□□□□□ -0.88
TPM1-230ENST00000561266 UFSP1Q6NVU6 142 aa9.57□□□□□ -0.88
TPM1-230ENST00000561266 Q9UF83 564 aa9.57□□□□□ -0.88
TPM1-230ENST00000561266 FAT2Q9NYQ8 4349 aa9.57□□□□□ -0.88
TPM1-230ENST00000561266 RBFOX3A6NFN3 312 aa9.56□□□□□ -0.88
TPM1-230ENST00000561266 PDE6DO43924 150 aa9.56□□□□□ -0.88
TPM1-230ENST00000561266 IFNA1P01562 189 aa9.56□□□□□ -0.88
TPM1-230ENST00000561266 GYPEP15421 78 aa9.56□□□□□ -0.88
TPM1-230ENST00000561266 CCL18P55774 89 aa9.56□□□□□ -0.88
TPM1-230ENST00000561266 KRTAP1-5Q9BYS1 174 aa9.56□□□□□ -0.88
TPM1-230ENST00000561266 PARLQ9H300 379 aa9.56□□□□□ -0.88
TPM1-230ENST00000561266 ICOSQ9Y6W8 199 aa9.56□□□□□ -0.88
TPM1-230ENST00000561266 MUC21A0A0G2JKD1 596 aa9.55□□□□□ -0.88
TPM1-230ENST00000561266 MUC21A0A140T8X8 626 aa9.55□□□□□ -0.88
TPM1-230ENST00000561266 C19orf71A6NCJ1 209 aa9.55□□□□□ -0.88
TPM1-230ENST00000561266 RTL8CO15255 209 aa9.55□□□□□ -0.88
TPM1-230ENST00000561266 GZMBP10144 247 aa9.55□□□□□ -0.88
TPM1-230ENST00000561266 SLC25A29Q8N8R3 303 aa9.55□□□□□ -0.88
TPM1-230ENST00000561266 K7EN84 100 aa9.54□□□□□ -0.88
TPM1-230ENST00000561266 MGST1P10620 155 aaKnown RBP9.54□□□□□ -0.88
TPM1-230ENST00000561266 FAM3BP58499 235 aaPredicted RBP9.54□□□□□ -0.88
TPM1-230ENST00000561266 SLAQ13239 276 aa9.54□□□□□ -0.88
TPM1-230ENST00000561266 LYPD5Q6UWN5 251 aa9.54□□□□□ -0.88
TPM1-230ENST00000561266 OR10AG1Q8NH19 301 aa9.54□□□□□ -0.88
TPM1-230ENST00000561266 MRPS16Q9Y3D3 137 aaKnown RBP9.54□□□□□ -0.88
TPM1-230ENST00000561266 CRYGDP07320 174 aa9.53□□□□□ -0.88
TPM1-230ENST00000561266 GNG4P50150 75 aa9.53□□□□□ -0.88
TPM1-230ENST00000561266 MRPL23Q16540 153 aaKnown RBP9.53□□□□□ -0.88
TPM1-230ENST00000561266 TOR2AQ5JU69 321 aa9.53□□□□□ -0.88
TPM1-230ENST00000561266 TEX261Q6UWH6 196 aa9.53□□□□□ -0.88
TPM1-230ENST00000561266 C14orf178Q8N769 122 aaPredicted RBP9.53□□□□□ -0.88
TPM1-230ENST00000561266 OCC1Q8TAD7 63 aa9.53□□□□□ -0.88
TPM1-230ENST00000561266 UPK3BQ9BT76 320 aa9.53□□□□□ -0.88
TPM1-230ENST00000561266 Q9H8V8 135 aa9.53□□□□□ -0.88
TPM1-230ENST00000561266 A0A087WWL8 130 aa9.52□□□□□ -0.89
TPM1-230ENST00000561266 NBDYA0A0U1RRE5 68 aa9.52□□□□□ -0.89
TPM1-230ENST00000561266 M0R381 172 aa9.52□□□□□ -0.89
TPM1-230ENST00000561266 SNAI2O43623 268 aa9.52□□□□□ -0.89
TPM1-230ENST00000561266 PIK3CD-AS1Q5SR53 167 aa9.52□□□□□ -0.89
TPM1-230ENST00000561266 SFRP2Q96HF1 295 aa9.52□□□□□ -0.89
TPM1-230ENST00000561266 SSBP4Q9BWG4 385 aaPredicted RBP9.52□□□□□ -0.89
TPM1-230ENST00000561266 PHLDA3Q9Y5J5 127 aa9.52□□□□□ -0.89
TPM1-230ENST00000561266 A8MWV9 139 aa9.51□□□□□ -0.89
TPM1-230ENST00000561266 C9JQL5 133 aa9.51□□□□□ -0.89
TPM1-230ENST00000561266 NXPH4O95158 308 aa9.51□□□□□ -0.89
TPM1-230ENST00000561266 CXCL1P09341 107 aa9.51□□□□□ -0.89
TPM1-230ENST00000561266 TAGLN2P37802 199 aaKnown RBP9.51□□□□□ -0.89
TPM1-230ENST00000561266 SRSF3P84103 164 aaKnown RBP9.51□□□□□ -0.89
TPM1-230ENST00000561266 NEGR1Q7Z3B1 354 aa9.51□□□□□ -0.89
TPM1-230ENST00000561266 FAM210AQ96ND0 272 aa9.51□□□□□ -0.89
TPM1-230ENST00000561266 TRBV6-4A0A1B0GX49 114 aa9.5□□□□□ -0.89
TPM1-230ENST00000561266 SRP19P09132 144 aaKnown RBP9.5□□□□□ -0.89
TPM1-230ENST00000561266 IGLC6P0CF74 106 aa9.5□□□□□ -0.89
TPM1-230ENST00000561266 MED14OSP0DP75 135 aa9.5□□□□□ -0.89
TPM1-230ENST00000561266 SRIP30626 198 aa9.5□□□□□ -0.89
TPM1-230ENST00000561266 SSTP61278 116 aa9.5□□□□□ -0.89
TPM1-230ENST00000561266 NUDT10Q8NFP7 164 aa9.5□□□□□ -0.89
TPM1-230ENST00000561266 OR2D3Q8NGH3 330 aa9.5□□□□□ -0.89
TPM1-230ENST00000561266 NUDT11Q96G61 164 aa9.5□□□□□ -0.89
TPM1-230ENST00000561266 RNASE7Q9H1E1 156 aaKnown RBP9.5□□□□□ -0.89
TPM1-230ENST00000561266 TMEM250H0YL14 139 aa9.49□□□□□ -0.89
TPM1-230ENST00000561266 OR5AL1P0C617 328 aa9.49□□□□□ -0.89
TPM1-230ENST00000561266 LINC00694P0DN24 101 aa9.49□□□□□ -0.89
TPM1-230ENST00000561266 FAM74A4Q5TZK3 123 aa9.49□□□□□ -0.89
TPM1-230ENST00000561266 ZFP2Q6ZN57 461 aa9.49□□□□□ -0.89
TPM1-230ENST00000561266 WFDC10BQ8IUB3 73 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms