RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 EPDR1Q9UM22 224 aa18.11■□□□□ 0.49
SNRPA1-215ENST00000561187 FLG2Q5D862 2391 aaPredicted RBP18.1■□□□□ 0.49
SNRPA1-215ENST00000561187 TRAV34A0A0B4J273 112 aa18.1■□□□□ 0.49
SNRPA1-215ENST00000561187 TRBV6-4A0A1B0GX49 114 aa18.1■□□□□ 0.49
SNRPA1-215ENST00000561187 IBA57-AS1B1ANH7 110 aa18.1■□□□□ 0.49
SNRPA1-215ENST00000561187 RNASE3P12724 160 aaKnown RBP18.1■□□□□ 0.49
SNRPA1-215ENST00000561187 Q5BKY6 102 aa18.09■□□□□ 0.49
SNRPA1-215ENST00000561187 LELP1Q5T871 98 aa18.09■□□□□ 0.49
SNRPA1-215ENST00000561187 LINC00479Q96M42 142 aa18.09■□□□□ 0.49
SNRPA1-215ENST00000561187 AQP10Q96PS8 301 aa18.09■□□□□ 0.49
SNRPA1-215ENST00000561187 CXorf1O96002 111 aa18.08■□□□□ 0.48
SNRPA1-215ENST00000561187 Q6ZSN1 163 aa18.08■□□□□ 0.48
SNRPA1-215ENST00000561187 ATP6V0E2Q8NHE4 81 aa18.08■□□□□ 0.48
SNRPA1-215ENST00000561187 SUN5Q8TC36 379 aa18.08■□□□□ 0.48
SNRPA1-215ENST00000561187 ACTR3CQ9C0K3 210 aaPredicted RBP18.08■□□□□ 0.48
SNRPA1-215ENST00000561187 TMEM167BQ9NRX6 74 aa18.08■□□□□ 0.48
SNRPA1-215ENST00000561187 GAGE12JA6NER3 117 aa18.07■□□□□ 0.48
SNRPA1-215ENST00000561187 GAGE1Q13065 139 aa18.07■□□□□ 0.48
SNRPA1-215ENST00000561187 GAGE4Q13068 117 aa18.07■□□□□ 0.48
SNRPA1-215ENST00000561187 GAGE5Q13069 117 aa18.07■□□□□ 0.48
SNRPA1-215ENST00000561187 GAGE13Q4V321 117 aa18.07■□□□□ 0.48
SNRPA1-215ENST00000561187 GTSF1LQ9H1H1 148 aa18.07■□□□□ 0.48
SNRPA1-215ENST00000561187 MED28Q9H204 178 aa18.07■□□□□ 0.48
SNRPA1-215ENST00000561187 MBP02144 154 aa18.06■□□□□ 0.48
SNRPA1-215ENST00000561187 S100A4P26447 101 aaKnown RBP18.06■□□□□ 0.48
SNRPA1-215ENST00000561187 UBE2G2P60604 165 aa18.06■□□□□ 0.48
SNRPA1-215ENST00000561187 Q8N814 137 aa18.06■□□□□ 0.48
SNRPA1-215ENST00000561187 DNAH8Q96JB1 4490 aa18.06■□□□□ 0.48
SNRPA1-215ENST00000561187 MGST1P10620 155 aaKnown RBP18.05■□□□□ 0.48
SNRPA1-215ENST00000561187 LGALSLQ3ZCW2 172 aaPredicted RBP18.05■□□□□ 0.48
SNRPA1-215ENST00000561187 PARLQ9H300 379 aa18.05■□□□□ 0.48
SNRPA1-215ENST00000561187 IGKV3D-20A0A0C4DH25 116 aa18.04■□□□□ 0.48
SNRPA1-215ENST00000561187 SERF2P84101 59 aa18.04■□□□□ 0.48
SNRPA1-215ENST00000561187 RPL7L1Q6DKI1 246 aaKnown RBP18.04■□□□□ 0.48
SNRPA1-215ENST00000561187 JPT2Q9H910 190 aa18.04■□□□□ 0.48
SNRPA1-215ENST00000561187 ARL2-SNX15V9GYD0 113 aa18.04■□□□□ 0.48
SNRPA1-215ENST00000561187 CIDEAO60543 219 aa18.03■□□□□ 0.48
SNRPA1-215ENST00000561187 IFNA7P01567 189 aa18.03■□□□□ 0.48
SNRPA1-215ENST00000561187 WFDC2Q14508 124 aa18.03■□□□□ 0.48
SNRPA1-215ENST00000561187 OR2T35Q8NGX2 323 aa18.03■□□□□ 0.48
SNRPA1-215ENST00000561187 NTN5Q8WTR8 489 aaPredicted RBP18.03■□□□□ 0.48
SNRPA1-215ENST00000561187 FXYD6-FXYD2A0A087WZ82 144 aa18.02■□□□□ 0.48
SNRPA1-215ENST00000561187 LECT2O14960 151 aa18.02■□□□□ 0.48
SNRPA1-215ENST00000561187 FGF8P55075 233 aaPredicted RBP18.02■□□□□ 0.48
SNRPA1-215ENST00000561187 ZNF726P1Q15940 193 aa18.02■□□□□ 0.48
SNRPA1-215ENST00000561187 SAPCD1Q5SSQ6 148 aa18.02■□□□□ 0.48
SNRPA1-215ENST00000561187 Q9UF83 564 aa18.02■□□□□ 0.48
SNRPA1-215ENST00000561187 TNFSF18Q9UNG2 199 aa18.02■□□□□ 0.48
SNRPA1-215ENST00000561187 SRRM2Q9UQ35 2752 aaKnown RBP18.01■□□□□ 0.47
SNRPA1-215ENST00000561187 H3BVH4 76 aa18.01■□□□□ 0.47
SNRPA1-215ENST00000561187 ASIPP42127 132 aa18.01■□□□□ 0.47
SNRPA1-215ENST00000561187 SAMD10Q9BYL1 202 aa18.01■□□□□ 0.47
SNRPA1-215ENST00000561187 FAM30AQ9NZY2 134 aa18.01■□□□□ 0.47
SNRPA1-215ENST00000561187 M0R036 132 aa18■□□□□ 0.47
SNRPA1-215ENST00000561187 Q86TA4 180 aa18■□□□□ 0.47
SNRPA1-215ENST00000561187 C14orf178Q8N769 122 aaPredicted RBP18■□□□□ 0.47
SNRPA1-215ENST00000561187 PTH2Q96A98 100 aa18■□□□□ 0.47
SNRPA1-215ENST00000561187 A0A1W2PRE2 83 aa17.99■□□□□ 0.47
SNRPA1-215ENST00000561187 PEX7O00628 323 aa17.99■□□□□ 0.47
SNRPA1-215ENST00000561187 DAZ4Q86SG3 579 aaKnown RBP17.99■□□□□ 0.47
SNRPA1-215ENST00000561187 TMEM70Q9BUB7 260 aa17.99■□□□□ 0.47
SNRPA1-215ENST00000561187 DAZ3Q9NR90 486 aaKnown RBP17.99■□□□□ 0.47
SNRPA1-215ENST00000561187 RNF222A6NCQ9 220 aa17.98■□□□□ 0.47
SNRPA1-215ENST00000561187 A8MWV9 139 aa17.98■□□□□ 0.47
SNRPA1-215ENST00000561187 FAM229AH3BQW9 127 aa17.98■□□□□ 0.47
SNRPA1-215ENST00000561187 INO80EQ8NBZ0 244 aaPredicted RBP17.98■□□□□ 0.47
SNRPA1-215ENST00000561187 B4DEV8 164 aa17.97■□□□□ 0.47
SNRPA1-215ENST00000561187 PTTG1O95997 202 aa17.97■□□□□ 0.47
SNRPA1-215ENST00000561187 LINC00694P0DN24 101 aa17.97■□□□□ 0.47
SNRPA1-215ENST00000561187 BORCS7-ASMTA0A0B4J1R7 106 aa17.96■□□□□ 0.47
SNRPA1-215ENST00000561187 CTXND1A0A1B0GTU2 59 aa17.96■□□□□ 0.47
SNRPA1-215ENST00000561187 GRIFINA4D1Z8 144 aa17.96■□□□□ 0.47
SNRPA1-215ENST00000561187 FABP5P3A8MUU1 101 aa17.96■□□□□ 0.47
SNRPA1-215ENST00000561187 GIPP09681 153 aaPredicted RBP17.96■□□□□ 0.47
SNRPA1-215ENST00000561187 LAGE3Q14657 143 aa17.96■□□□□ 0.47
SNRPA1-215ENST00000561187 FAM74A4Q5TZK3 123 aa17.96■□□□□ 0.47
SNRPA1-215ENST00000561187 ZC2HC1AQ96GY0 325 aa17.96■□□□□ 0.47
SNRPA1-215ENST00000561187 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.95■□□□□ 0.46
SNRPA1-215ENST00000561187 DMRTA1Q5VZB9 504 aa17.95■□□□□ 0.46
SNRPA1-215ENST00000561187 ZFP2Q6ZN57 461 aa17.95■□□□□ 0.46
SNRPA1-215ENST00000561187 TM2D2Q9BX73 214 aa17.95■□□□□ 0.46
SNRPA1-215ENST00000561187 BOLA1Q9Y3E2 137 aa17.95■□□□□ 0.46
SNRPA1-215ENST00000561187 TMSB15BA0A087X1C1 80 aa17.94■□□□□ 0.46
SNRPA1-215ENST00000561187 FAM74A7A6NL05 159 aa17.93■□□□□ 0.46
SNRPA1-215ENST00000561187 SH2D1AO60880 128 aa17.93■□□□□ 0.46
SNRPA1-215ENST00000561187 AKR1C8PQ5T2L2 129 aa17.93■□□□□ 0.46
SNRPA1-215ENST00000561187 UFSP1Q6NVU6 142 aa17.93■□□□□ 0.46
SNRPA1-215ENST00000561187 IL36BQ9NZH7 164 aa17.93■□□□□ 0.46
SNRPA1-215ENST00000561187 A0A087WWL8 130 aa17.92■□□□□ 0.46
SNRPA1-215ENST00000561187 ARMS2P0C7Q2 107 aa17.92■□□□□ 0.46
SNRPA1-215ENST00000561187 CRIP1P50238 77 aa17.92■□□□□ 0.46
SNRPA1-215ENST00000561187 DNAJC30Q96LL9 226 aa17.92■□□□□ 0.46
SNRPA1-215ENST00000561187 SYT8Q8NBV8 401 aa17.91■□□□□ 0.46
SNRPA1-215ENST00000561187 OR11H4Q8NGC9 324 aa17.91■□□□□ 0.46
SNRPA1-215ENST00000561187 KRBOX1C9JBD0 128 aa17.9■□□□□ 0.46
SNRPA1-215ENST00000561187 LINC01620Q4KN68 170 aa17.9■□□□□ 0.46
SNRPA1-215ENST00000561187 BAALCQ8WXS3 180 aa17.9■□□□□ 0.46
SNRPA1-215ENST00000561187 TRAV8-3A0A0A6YYJ7 113 aa17.89■□□□□ 0.45
SNRPA1-215ENST00000561187 MAP1LC3B2A6NCE7 125 aa17.89■□□□□ 0.45
SNRPA1-215ENST00000561187 M0R381 172 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms