RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 MRPS16Q9Y3D3 137 aaKnown RBP11.01□□□□□ -0.65
LMX1B-204ENST00000561065 ABCA13Q86UQ4 5058 aa11□□□□□ -0.65
LMX1B-204ENST00000561065 C9JCJ5 164 aa11□□□□□ -0.65
LMX1B-204ENST00000561065 IFNA1P01562 189 aa11□□□□□ -0.65
LMX1B-204ENST00000561065 ASIPP42127 132 aa11□□□□□ -0.65
LMX1B-204ENST00000561065 ZNF80P51504 273 aaPredicted RBP11□□□□□ -0.65
LMX1B-204ENST00000561065 CRYBA4P53673 196 aa11□□□□□ -0.65
LMX1B-204ENST00000561065 FHL2Q14192 279 aa11□□□□□ -0.65
LMX1B-204ENST00000561065 TTC32Q5I0X7 151 aa11□□□□□ -0.65
LMX1B-204ENST00000561065 COX8CQ7Z4L0 72 aa11□□□□□ -0.65
LMX1B-204ENST00000561065 Q86TA4 180 aa11□□□□□ -0.65
LMX1B-204ENST00000561065 BOLA1Q9Y3E2 137 aa11□□□□□ -0.65
LMX1B-204ENST00000561065 TAGLN2P37802 199 aaKnown RBP10.99□□□□□ -0.65
LMX1B-204ENST00000561065 PIK3CD-AS1Q5SR53 167 aa10.99□□□□□ -0.65
LMX1B-204ENST00000561065 NEGR1Q7Z3B1 354 aa10.99□□□□□ -0.65
LMX1B-204ENST00000561065 A0A1B0GV50 99 aa10.98□□□□□ -0.65
LMX1B-204ENST00000561065 B4DEV8 164 aa10.98□□□□□ -0.65
LMX1B-204ENST00000561065 SRIP30626 198 aa10.98□□□□□ -0.65
LMX1B-204ENST00000561065 SULT1A2P50226 295 aa10.98□□□□□ -0.65
LMX1B-204ENST00000561065 SYT8Q8NBV8 401 aa10.98□□□□□ -0.65
LMX1B-204ENST00000561065 LTAP01374 205 aa10.97□□□□□ -0.65
LMX1B-204ENST00000561065 BAGE2Q86Y30 109 aa10.97□□□□□ -0.65
LMX1B-204ENST00000561065 ZNF479Q96JC4 524 aa10.97□□□□□ -0.65
LMX1B-204ENST00000561065 PRADC1Q9BSG0 188 aa10.97□□□□□ -0.65
LMX1B-204ENST00000561065 GNG13Q9P2W3 67 aa10.97□□□□□ -0.65
LMX1B-204ENST00000561065 hCG_2014768A0A024R1R8 64 aa10.96□□□□□ -0.65
LMX1B-204ENST00000561065 TRAV9-2A0A087WT02 112 aa10.96□□□□□ -0.65
LMX1B-204ENST00000561065 A8MWV9 139 aa10.96□□□□□ -0.65
LMX1B-204ENST00000561065 SFTA3P0C7M3 94 aa10.96□□□□□ -0.65
LMX1B-204ENST00000561065 BTF3P20290 206 aaKnown RBP10.96□□□□□ -0.65
LMX1B-204ENST00000561065 C9orf85Q96MD7 179 aa10.96□□□□□ -0.65
LMX1B-204ENST00000561065 IL36BQ9NZH7 164 aa10.96□□□□□ -0.65
LMX1B-204ENST00000561065 A0A1W2PPQ1 181 aa10.95□□□□□ -0.66
LMX1B-204ENST00000561065 PDE6DO43924 150 aa10.95□□□□□ -0.66
LMX1B-204ENST00000561065 ZNF674Q2M3X9 581 aa10.95□□□□□ -0.66
LMX1B-204ENST00000561065 ZC2HC1AQ96GY0 325 aa10.95□□□□□ -0.66
LMX1B-204ENST00000561065 C11orf21Q9P2W6 132 aa10.95□□□□□ -0.66
LMX1B-204ENST00000561065 IGKV3D-20A0A0C4DH25 116 aa10.94□□□□□ -0.66
LMX1B-204ENST00000561065 TRBV6-4A0A1B0GX49 114 aa10.94□□□□□ -0.66
LMX1B-204ENST00000561065 K7EP13 123 aa10.94□□□□□ -0.66
LMX1B-204ENST00000561065 RS1O15537 224 aa10.94□□□□□ -0.66
LMX1B-204ENST00000561065 SH2D1AO60880 128 aa10.94□□□□□ -0.66
LMX1B-204ENST00000561065 GYPEP15421 78 aa10.94□□□□□ -0.66
LMX1B-204ENST00000561065 DNLZQ5SXM8 178 aa10.94□□□□□ -0.66
LMX1B-204ENST00000561065 BIN3Q9NQY0 253 aa10.94□□□□□ -0.66
LMX1B-204ENST00000561065 PHLDA3Q9Y5J5 127 aa10.94□□□□□ -0.66
LMX1B-204ENST00000561065 KRBOX1C9JBD0 128 aa10.93□□□□□ -0.66
LMX1B-204ENST00000561065 SIVA1O15304 175 aa10.93□□□□□ -0.66
LMX1B-204ENST00000561065 MGST1P10620 155 aaKnown RBP10.93□□□□□ -0.66
LMX1B-204ENST00000561065 BLOC1S1P78537 153 aa10.93□□□□□ -0.66
LMX1B-204ENST00000561065 RHOHQ15669 191 aa10.93□□□□□ -0.66
LMX1B-204ENST00000561065 CFAP126Q5VTH2 177 aa10.93□□□□□ -0.66
LMX1B-204ENST00000561065 ZFP2Q6ZN57 461 aa10.93□□□□□ -0.66
LMX1B-204ENST00000561065 SCO2A0A1W2PP80 73 aa10.92□□□□□ -0.66
LMX1B-204ENST00000561065 K7EQD1 137 aa10.92□□□□□ -0.66
LMX1B-204ENST00000561065 M0R036 132 aa10.92□□□□□ -0.66
LMX1B-204ENST00000561065 RNASE3P12724 160 aaKnown RBP10.92□□□□□ -0.66
LMX1B-204ENST00000561065 LINC01559Q495D7 138 aa10.92□□□□□ -0.66
LMX1B-204ENST00000561065 ZNF506Q5JVG8 444 aa10.92□□□□□ -0.66
LMX1B-204ENST00000561065 LYPD5Q6UWN5 251 aa10.92□□□□□ -0.66
LMX1B-204ENST00000561065 DAZAP1Q96EP5 407 aaKnown RBP10.92□□□□□ -0.66
LMX1B-204ENST00000561065 PGPEP1LA6NFU8 196 aa10.91□□□□□ -0.66
LMX1B-204ENST00000561065 C16orf90A8MZG2 172 aa10.91□□□□□ -0.66
LMX1B-204ENST00000561065 RHODO00212 210 aa10.91□□□□□ -0.66
LMX1B-204ENST00000561065 NXPH4O95158 308 aa10.91□□□□□ -0.66
LMX1B-204ENST00000561065 ARMS2P0C7Q2 107 aa10.91□□□□□ -0.66
LMX1B-204ENST00000561065 GATA1P15976 413 aaPredicted RBP10.91□□□□□ -0.66
LMX1B-204ENST00000561065 CRIP1P50238 77 aa10.91□□□□□ -0.66
LMX1B-204ENST00000561065 LINC00315P59091 139 aa10.91□□□□□ -0.66
LMX1B-204ENST00000561065 MEF2BQ02080 365 aaPredicted RBP10.91□□□□□ -0.66
LMX1B-204ENST00000561065 Q6ZRN7 208 aaPredicted RBP10.91□□□□□ -0.66
LMX1B-204ENST00000561065 NHLRC2Q8NBF2 726 aa10.91□□□□□ -0.66
LMX1B-204ENST00000561065 SMIM12Q96EX1 92 aa10.91□□□□□ -0.66
LMX1B-204ENST00000561065 KRTAP4-5Q9BYR2 181 aa10.91□□□□□ -0.66
LMX1B-204ENST00000561065 VAX2Q9UIW0 290 aa10.91□□□□□ -0.66
LMX1B-204ENST00000561065 RPL35P42766 123 aaKnown RBP10.9□□□□□ -0.66
LMX1B-204ENST00000561065 ZFP82Q8N141 532 aa10.9□□□□□ -0.66
LMX1B-204ENST00000561065 C9orf62Q8N4C0 152 aa10.9□□□□□ -0.66
LMX1B-204ENST00000561065 H3BVH4 76 aa10.89□□□□□ -0.67
LMX1B-204ENST00000561065 CXCL1P09341 107 aa10.89□□□□□ -0.67
LMX1B-204ENST00000561065 EVI2AP22794 236 aa10.89□□□□□ -0.67
LMX1B-204ENST00000561065 KRTAP10-2P60368 255 aa10.89□□□□□ -0.67
LMX1B-204ENST00000561065 CCL20P78556 96 aa10.89□□□□□ -0.67
LMX1B-204ENST00000561065 C11orf52Q96A22 123 aa10.89□□□□□ -0.67
LMX1B-204ENST00000561065 MLST8Q9BVC4 326 aa10.89□□□□□ -0.67
LMX1B-204ENST00000561065 MED9Q9NWA0 146 aa10.89□□□□□ -0.67
LMX1B-204ENST00000561065 XKRY2A2RUG3 117 aa10.88□□□□□ -0.67
LMX1B-204ENST00000561065 GRIFINA4D1Z8 144 aa10.88□□□□□ -0.67
LMX1B-204ENST00000561065 GNG4P50150 75 aa10.88□□□□□ -0.67
LMX1B-204ENST00000561065 TIRAPP58753 221 aa10.88□□□□□ -0.67
LMX1B-204ENST00000561065 SPATA12Q7Z6I5 190 aa10.88□□□□□ -0.67
LMX1B-204ENST00000561065 SLC25A29Q8N8R3 303 aa10.88□□□□□ -0.67
LMX1B-204ENST00000561065 TMSB15BA0A087X1C1 80 aa10.87□□□□□ -0.67
LMX1B-204ENST00000561065 TRAV8-6A0A0B4J262 113 aa10.87□□□□□ -0.67
LMX1B-204ENST00000561065 LOC100131303A0A0U1RQF7 123 aa10.87□□□□□ -0.67
LMX1B-204ENST00000561065 BCL2P10415 239 aa10.87□□□□□ -0.67
LMX1B-204ENST00000561065 RPS20P60866 119 aaKnown RBP10.87□□□□□ -0.67
LMX1B-204ENST00000561065 PRR27Q6MZM9 219 aa10.87□□□□□ -0.67
LMX1B-204ENST00000561065 LY96Q9Y6Y9 160 aa10.87□□□□□ -0.67
LMX1B-204ENST00000561065 IGHV3-73A0A0B4J1V6 119 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms