RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 PLECQ15149 4684 aaKnown RBP6.76□□□□□ -1.33
RABGGTA-221ENST00000561055 LYSTQ99698 3801 aa6.76□□□□□ -1.33
RABGGTA-221ENST00000561055 TRAV4A0A0B4J268 109 aa6.75□□□□□ -1.33
RABGGTA-221ENST00000561055 LCE6AA0A183 80 aa6.75□□□□□ -1.33
RABGGTA-221ENST00000561055 C9JQL5 133 aa6.75□□□□□ -1.33
RABGGTA-221ENST00000561055 F5H768 121 aa6.75□□□□□ -1.33
RABGGTA-221ENST00000561055 K7EN84 100 aa6.75□□□□□ -1.33
RABGGTA-221ENST00000561055 SNAI2O43623 268 aa6.75□□□□□ -1.33
RABGGTA-221ENST00000561055 ARMS2P0C7Q2 107 aa6.75□□□□□ -1.33
RABGGTA-221ENST00000561055 MGST1P10620 155 aaKnown RBP6.75□□□□□ -1.33
RABGGTA-221ENST00000561055 HTN3P15516 51 aa6.75□□□□□ -1.33
RABGGTA-221ENST00000561055 S100A4P26447 101 aaKnown RBP6.75□□□□□ -1.33
RABGGTA-221ENST00000561055 SRSF3P84103 164 aaKnown RBP6.75□□□□□ -1.33
RABGGTA-221ENST00000561055 SLAQ13239 276 aa6.75□□□□□ -1.33
RABGGTA-221ENST00000561055 LGALS9CQ6DKI2 356 aa6.75□□□□□ -1.33
RABGGTA-221ENST00000561055 PRR27Q6MZM9 219 aa6.75□□□□□ -1.33
RABGGTA-221ENST00000561055 C15orf53Q8NAA6 179 aa6.75□□□□□ -1.33
RABGGTA-221ENST00000561055 DAZAP1Q96EP5 407 aaKnown RBP6.75□□□□□ -1.33
RABGGTA-221ENST00000561055 SMIM7Q9BQ49 75 aa6.75□□□□□ -1.33
RABGGTA-221ENST00000561055 DNAH1Q9P2D7 4330 aa6.74□□□□□ -1.33
RABGGTA-221ENST00000561055 GRIFINA4D1Z8 144 aa6.74□□□□□ -1.33
RABGGTA-221ENST00000561055 ZNF727A8MUV8 499 aa6.74□□□□□ -1.33
RABGGTA-221ENST00000561055 H3BVH4 76 aa6.74□□□□□ -1.33
RABGGTA-221ENST00000561055 RS1O15537 224 aa6.74□□□□□ -1.33
RABGGTA-221ENST00000561055 OR5AL1P0C617 328 aa6.74□□□□□ -1.33
RABGGTA-221ENST00000561055 RPS20P60866 119 aaKnown RBP6.74□□□□□ -1.33
RABGGTA-221ENST00000561055 RPL19P84098 196 aaKnown RBP6.74□□□□□ -1.33
RABGGTA-221ENST00000561055 OR5I1Q13606 314 aa6.74□□□□□ -1.33
RABGGTA-221ENST00000561055 FHL2Q14192 279 aa6.74□□□□□ -1.33
RABGGTA-221ENST00000561055 TMEM88Q6PEY1 159 aa6.74□□□□□ -1.33
RABGGTA-221ENST00000561055 FAM231DQ6ZW35 169 aa6.74□□□□□ -1.33
RABGGTA-221ENST00000561055 NUDT10Q8NFP7 164 aa6.74□□□□□ -1.33
RABGGTA-221ENST00000561055 NUDT11Q96G61 164 aa6.74□□□□□ -1.33
RABGGTA-221ENST00000561055 TMSB15BA0A087X1C1 80 aa6.73□□□□□ -1.33
RABGGTA-221ENST00000561055 XKRY2A2RUG3 117 aa6.73□□□□□ -1.33
RABGGTA-221ENST00000561055 A8MWV9 139 aa6.73□□□□□ -1.33
RABGGTA-221ENST00000561055 NXPH4O95158 308 aa6.73□□□□□ -1.33
RABGGTA-221ENST00000561055 P01737 135 aa6.73□□□□□ -1.33
RABGGTA-221ENST00000561055 IGLC6P0CF74 106 aa6.73□□□□□ -1.33
RABGGTA-221ENST00000561055 CFAP126Q5VTH2 177 aa6.73□□□□□ -1.33
RABGGTA-221ENST00000561055 ZFP2Q6ZN57 461 aa6.73□□□□□ -1.33
RABGGTA-221ENST00000561055 LINC01551Q86U37 167 aa6.73□□□□□ -1.33
RABGGTA-221ENST00000561055 OR4C5Q8NGB2 326 aa6.73□□□□□ -1.33
RABGGTA-221ENST00000561055 OR2D3Q8NGH3 330 aa6.73□□□□□ -1.33
RABGGTA-221ENST00000561055 LINC00476Q8WZB0 136 aa6.73□□□□□ -1.33
RABGGTA-221ENST00000561055 VSIG2Q96IQ7 327 aa6.73□□□□□ -1.33
RABGGTA-221ENST00000561055 ZNF479Q96JC4 524 aa6.73□□□□□ -1.33
RABGGTA-221ENST00000561055 PRO0255Q9UI72 69 aa6.73□□□□□ -1.33
RABGGTA-221ENST00000561055 PHLDA3Q9Y5J5 127 aa6.73□□□□□ -1.33
RABGGTA-221ENST00000561055 ALMS1Q8TCU4 4167 aa6.72□□□□□ -1.33
RABGGTA-221ENST00000561055 TRAV26-1A0A087WT03 109 aa6.72□□□□□ -1.33
RABGGTA-221ENST00000561055 CEBPGP53567 150 aa6.72□□□□□ -1.33
RABGGTA-221ENST00000561055 CRYBA4P53673 196 aa6.72□□□□□ -1.33
RABGGTA-221ENST00000561055 TMEM241Q24JQ0 296 aa6.72□□□□□ -1.33
RABGGTA-221ENST00000561055 DMRTA1Q5VZB9 504 aa6.72□□□□□ -1.33
RABGGTA-221ENST00000561055 UFSP1Q6NVU6 142 aa6.72□□□□□ -1.33
RABGGTA-221ENST00000561055 ZFP82Q8N141 532 aa6.72□□□□□ -1.33
RABGGTA-221ENST00000561055 SYT8Q8NBV8 401 aa6.72□□□□□ -1.33
RABGGTA-221ENST00000561055 SFRP2Q96HF1 295 aa6.72□□□□□ -1.33
RABGGTA-221ENST00000561055 HHLA3Q9XRX5 114 aa6.72□□□□□ -1.33
RABGGTA-221ENST00000561055 VPS13DQ5THJ4 4388 aa6.71□□□□□ -1.34
RABGGTA-221ENST00000561055 TRGV4A0A0C4DH28 118 aa6.71□□□□□ -1.34
RABGGTA-221ENST00000561055 A0A1W2PPQ1 181 aa6.71□□□□□ -1.34
RABGGTA-221ENST00000561055 F2Z2F3 143 aa6.71□□□□□ -1.34
RABGGTA-221ENST00000561055 SFTA3P0C7M3 94 aa6.71□□□□□ -1.34
RABGGTA-221ENST00000561055 P0DMU3 169 aa6.71□□□□□ -1.34
RABGGTA-221ENST00000561055 FAM231AP0DMU4 169 aa6.71□□□□□ -1.34
RABGGTA-221ENST00000561055 FAM231CP0DMU5 169 aa6.71□□□□□ -1.34
RABGGTA-221ENST00000561055 GATA1P15976 413 aaPredicted RBP6.71□□□□□ -1.34
RABGGTA-221ENST00000561055 FOXA3P55318 350 aaPredicted RBP6.71□□□□□ -1.34
RABGGTA-221ENST00000561055 RNF212Q495C1 297 aa6.71□□□□□ -1.34
RABGGTA-221ENST00000561055 CT83Q5H943 113 aa6.71□□□□□ -1.34
RABGGTA-221ENST00000561055 SOHLH1Q5JUK2 328 aa6.71□□□□□ -1.34
RABGGTA-221ENST00000561055 WDR73Q6P4I2 378 aa6.71□□□□□ -1.34
RABGGTA-221ENST00000561055 RNASE7Q9H1E1 156 aaKnown RBP6.71□□□□□ -1.34
RABGGTA-221ENST00000561055 RPP21Q9H633 154 aaKnown RBP6.71□□□□□ -1.34
RABGGTA-221ENST00000561055 OSTCQ9NRP0 149 aa6.71□□□□□ -1.34
RABGGTA-221ENST00000561055 NAT8Q9UHE5 227 aa6.71□□□□□ -1.34
RABGGTA-221ENST00000561055 TRBV6-4A0A1B0GX49 114 aa6.7□□□□□ -1.34
RABGGTA-221ENST00000561055 PAX4O43316 350 aa6.7□□□□□ -1.34
RABGGTA-221ENST00000561055 IGHV3-53P01767 116 aa6.7□□□□□ -1.34
RABGGTA-221ENST00000561055 CRYGDP07320 174 aa6.7□□□□□ -1.34
RABGGTA-221ENST00000561055 RPL23P62829 140 aaKnown RBP6.7□□□□□ -1.34
RABGGTA-221ENST00000561055 UQCC3Q6UW78 93 aa6.7□□□□□ -1.34
RABGGTA-221ENST00000561055 OR10AG1Q8NH19 301 aa6.7□□□□□ -1.34
RABGGTA-221ENST00000561055 CNFNQ9BYD5 112 aa6.7□□□□□ -1.34
RABGGTA-221ENST00000561055 A0A096LPF7 62 aa6.69□□□□□ -1.34
RABGGTA-221ENST00000561055 A0A0J9YY99 117 aa6.69□□□□□ -1.34
RABGGTA-221ENST00000561055 FAM231BA6NCW3 169 aa6.69□□□□□ -1.34
RABGGTA-221ENST00000561055 A8MWL6 223 aa6.69□□□□□ -1.34
RABGGTA-221ENST00000561055 RHODO00212 210 aa6.69□□□□□ -1.34
RABGGTA-221ENST00000561055 GATCO43716 136 aaKnown RBP6.69□□□□□ -1.34
RABGGTA-221ENST00000561055 GZMBP10144 247 aa6.69□□□□□ -1.34
RABGGTA-221ENST00000561055 CTRLP40313 264 aa6.69□□□□□ -1.34
RABGGTA-221ENST00000561055 FAM3BP58499 235 aaPredicted RBP6.69□□□□□ -1.34
RABGGTA-221ENST00000561055 ERVFC1-1P60608 527 aa6.69□□□□□ -1.34
RABGGTA-221ENST00000561055 CACNG7P62955 275 aa6.69□□□□□ -1.34
RABGGTA-221ENST00000561055 FER1L6-AS1Q8NA97 138 aa6.69□□□□□ -1.34
RABGGTA-221ENST00000561055 ISOC2Q96AB3 205 aa6.69□□□□□ -1.34
RABGGTA-221ENST00000561055 JPT2Q9H910 190 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms