RNA–Protein interactions for RNA: ENST00000561004.1

AP4E1-204, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 3

Gene AP4E1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-204ENST00000561004 TRGC1P0CF51 173 aa3.43□□□□□ -1.86
AP4E1-204ENST00000561004 HIST1H2BOP23527 126 aa3.43□□□□□ -1.86
AP4E1-204ENST00000561004 HIST1H2BBP33778 126 aa3.43□□□□□ -1.86
AP4E1-204ENST00000561004 CSN1S1P47710 185 aa3.43□□□□□ -1.86
AP4E1-204ENST00000561004 TFPI2P48307 235 aa3.43□□□□□ -1.86
AP4E1-204ENST00000561004 MEOX2P50222 304 aa3.43□□□□□ -1.86
AP4E1-204ENST00000561004 ZNF138P52744 262 aa3.43□□□□□ -1.86
AP4E1-204ENST00000561004 FOXA3P55318 350 aaPredicted RBP3.43□□□□□ -1.86
AP4E1-204ENST00000561004 HIST1H2BDP58876 126 aa3.43□□□□□ -1.86
AP4E1-204ENST00000561004 RAB5BP61020 215 aa3.43□□□□□ -1.86
AP4E1-204ENST00000561004 HIST1H2BCP62807 126 aa3.43□□□□□ -1.86
AP4E1-204ENST00000561004 HIST2H2BEQ16778 126 aa3.43□□□□□ -1.86
AP4E1-204ENST00000561004 DEFB114Q30KQ6 69 aa3.43□□□□□ -1.86
AP4E1-204ENST00000561004 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.43□□□□□ -1.86
AP4E1-204ENST00000561004 TMEM136Q6ZRR5 245 aa3.43□□□□□ -1.86
AP4E1-204ENST00000561004 ZFAND2AQ8N6M9 145 aa3.43□□□□□ -1.86
AP4E1-204ENST00000561004 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.43□□□□□ -1.86
AP4E1-204ENST00000561004 ZNF738Q8NE65 137 aa3.43□□□□□ -1.86
AP4E1-204ENST00000561004 TSKUQ8WUA8 353 aa3.43□□□□□ -1.86
AP4E1-204ENST00000561004 HIST1H2BHQ93079 126 aa3.43□□□□□ -1.86
AP4E1-204ENST00000561004 HIST1H2BNQ99877 126 aa3.43□□□□□ -1.86
AP4E1-204ENST00000561004 HIST1H2BMQ99879 126 aa3.43□□□□□ -1.86
AP4E1-204ENST00000561004 RPP21Q9H633 154 aaKnown RBP3.43□□□□□ -1.86
AP4E1-204ENST00000561004 BIN3Q9NQY0 253 aa3.43□□□□□ -1.86
AP4E1-204ENST00000561004 TSSC4Q9Y5U2 329 aaPredicted RBP3.43□□□□□ -1.86
AP4E1-204ENST00000561004 FLNBO75369 2602 aaKnown RBP3.42□□□□□ -1.86
AP4E1-204ENST00000561004 TRAV9-1A0A075B6T8 112 aa3.42□□□□□ -1.86
AP4E1-204ENST00000561004 A0A1B0GXF2 115 aa3.42□□□□□ -1.86
AP4E1-204ENST00000561004 RBMY1BA6NDE4 496 aaKnown RBP3.42□□□□□ -1.86
AP4E1-204ENST00000561004 RBMY1EA6NEQ0 496 aaKnown RBP3.42□□□□□ -1.86
AP4E1-204ENST00000561004 C5orf52A6NGY3 159 aa3.42□□□□□ -1.86
AP4E1-204ENST00000561004 A8MTW9 85 aa3.42□□□□□ -1.86
AP4E1-204ENST00000561004 K7EQM0 130 aa3.42□□□□□ -1.86
AP4E1-204ENST00000561004 OVOL1O14753 267 aa3.42□□□□□ -1.86
AP4E1-204ENST00000561004 P01737 135 aa3.42□□□□□ -1.86
AP4E1-204ENST00000561004 S100A6P06703 90 aa3.42□□□□□ -1.86
AP4E1-204ENST00000561004 RBMY1DP0C7P1 496 aaKnown RBP3.42□□□□□ -1.86
AP4E1-204ENST00000561004 ZNF688P0C7X2 276 aa3.42□□□□□ -1.86
AP4E1-204ENST00000561004 IGLC6P0CF74 106 aa3.42□□□□□ -1.86
AP4E1-204ENST00000561004 S100PP25815 95 aa3.42□□□□□ -1.86
AP4E1-204ENST00000561004 SNRPEP62304 92 aaKnown RBP3.42□□□□□ -1.86
AP4E1-204ENST00000561004 FABP9Q0Z7S8 132 aa3.42□□□□□ -1.86
AP4E1-204ENST00000561004 GAGE2BQ13066 116 aa3.42□□□□□ -1.86
AP4E1-204ENST00000561004 SCGB2A2Q13296 93 aa3.42□□□□□ -1.86
AP4E1-204ENST00000561004 NSUN5P1Q3KNT7 163 aa3.42□□□□□ -1.86
AP4E1-204ENST00000561004 GAGE2EQ4V326 116 aa3.42□□□□□ -1.86
AP4E1-204ENST00000561004 SMUG1Q53HV7 270 aa3.42□□□□□ -1.86
AP4E1-204ENST00000561004 ACTL10Q5JWF8 245 aa3.42□□□□□ -1.86
AP4E1-204ENST00000561004 GAGE2AQ6NT46 116 aa3.42□□□□□ -1.86
AP4E1-204ENST00000561004 MRPL54Q6P161 138 aaKnown RBP3.42□□□□□ -1.86
AP4E1-204ENST00000561004 KCNIP4Q6PIL6 250 aa3.42□□□□□ -1.86
AP4E1-204ENST00000561004 APRG1Q8IVJ8 170 aa3.42□□□□□ -1.86
AP4E1-204ENST00000561004 TMEM61Q8N0U2 210 aa3.42□□□□□ -1.86
AP4E1-204ENST00000561004 OR8A1Q8NGG7 326 aa3.42□□□□□ -1.86
AP4E1-204ENST00000561004 OR2D3Q8NGH3 330 aa3.42□□□□□ -1.86
AP4E1-204ENST00000561004 BTF3L4Q96K17 158 aa3.42□□□□□ -1.86
AP4E1-204ENST00000561004 PGLYRP4Q96LB8 373 aa3.42□□□□□ -1.86
AP4E1-204ENST00000561004 CLEC5AQ9NY25 188 aa3.42□□□□□ -1.86
AP4E1-204ENST00000561004 GAGE2DQ9UEU5 116 aa3.42□□□□□ -1.86
AP4E1-204ENST00000561004 TP53TG3Q9ULZ0 132 aa3.42□□□□□ -1.86
AP4E1-204ENST00000561004 ZNF256Q9Y2P7 627 aaPredicted RBP3.42□□□□□ -1.86
AP4E1-204ENST00000561004 TMSB15BA0A087X1C1 80 aa3.41□□□□□ -1.86
AP4E1-204ENST00000561004 A0A0J9YX75 114 aa3.41□□□□□ -1.86
AP4E1-204ENST00000561004 A0A1B0GUS0 222 aa3.41□□□□□ -1.86
AP4E1-204ENST00000561004 GRIFINA4D1Z8 144 aa3.41□□□□□ -1.86
AP4E1-204ENST00000561004 FBLL1A6NHQ2 334 aaKnown RBP3.41□□□□□ -1.86
AP4E1-204ENST00000561004 FABP5P3A8MUU1 101 aa3.41□□□□□ -1.86
AP4E1-204ENST00000561004 HIGD1CA8MV81 97 aa3.41□□□□□ -1.86
AP4E1-204ENST00000561004 A8MWL6 223 aa3.41□□□□□ -1.86
AP4E1-204ENST00000561004 F2Z2F3 143 aa3.41□□□□□ -1.86
AP4E1-204ENST00000561004 NUPR1O60356 82 aa3.41□□□□□ -1.86
AP4E1-204ENST00000561004 ZNF324O75467 553 aaPredicted RBP3.41□□□□□ -1.86
AP4E1-204ENST00000561004 AMBPP02760 352 aa3.41□□□□□ -1.86
AP4E1-204ENST00000561004 ARMS2P0C7Q2 107 aa3.41□□□□□ -1.86
AP4E1-204ENST00000561004 CFC1BP0CG36 223 aa3.41□□□□□ -1.86
AP4E1-204ENST00000561004 CFC1P0CG37 223 aa3.41□□□□□ -1.86
AP4E1-204ENST00000561004 CRISP2P16562 243 aa3.41□□□□□ -1.86
AP4E1-204ENST00000561004 NDUFA6P56556 154 aa3.41□□□□□ -1.86
AP4E1-204ENST00000561004 LINC01547P58512 204 aaPredicted RBP3.41□□□□□ -1.86
AP4E1-204ENST00000561004 KIAA1644Q3SXP7 199 aa3.41□□□□□ -1.86
AP4E1-204ENST00000561004 PSMG4Q5JS54 123 aa3.41□□□□□ -1.86
AP4E1-204ENST00000561004 SAPCD1Q5SSQ6 148 aa3.41□□□□□ -1.86
AP4E1-204ENST00000561004 FAM162BQ5T6X4 162 aa3.41□□□□□ -1.86
AP4E1-204ENST00000561004 TMEM78Q5T7P6 136 aa3.41□□□□□ -1.86
AP4E1-204ENST00000561004 LYZL1Q6UWQ5 148 aa3.41□□□□□ -1.86
AP4E1-204ENST00000561004 AMTNQ6UX39 209 aa3.41□□□□□ -1.86
AP4E1-204ENST00000561004 SH2D6Q7Z4S9 175 aa3.41□□□□□ -1.86
AP4E1-204ENST00000561004 OR4B1Q8NGF8 309 aa3.41□□□□□ -1.86
AP4E1-204ENST00000561004 LINC00477Q96M19 166 aa3.41□□□□□ -1.86
AP4E1-204ENST00000561004 SAV1Q9H4B6 383 aaPredicted RBP3.41□□□□□ -1.86
AP4E1-204ENST00000561004 SIGLEC8Q9NYZ4 499 aa3.41□□□□□ -1.86
AP4E1-204ENST00000561004 NAT8BQ9UHF3 227 aa3.41□□□□□ -1.86
AP4E1-204ENST00000561004 TRAPPC1Q9Y5R8 145 aa3.41□□□□□ -1.86
AP4E1-204ENST00000561004 ATRQ13535 2644 aa3.41□□□□□ -1.86
AP4E1-204ENST00000561004 DNAH3Q8TD57 4116 aa3.4□□□□□ -1.86
AP4E1-204ENST00000561004 MUC21A0A0G2JKD1 596 aa3.4□□□□□ -1.87
AP4E1-204ENST00000561004 MUC21A0A140T8X8 626 aa3.4□□□□□ -1.87
AP4E1-204ENST00000561004 TMEM189A5PLL7 270 aa3.4□□□□□ -1.87
AP4E1-204ENST00000561004 FAM231BA6NCW3 169 aa3.4□□□□□ -1.87
AP4E1-204ENST00000561004 KNCNA6PVL3 124 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms