RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 LINC01556Q5JQF7 62 aa13.73□□□□□ -0.21
TSPAN3-206ENST00000559373 CYB561D1Q8N8Q1 229 aa13.73□□□□□ -0.21
TSPAN3-206ENST00000559373 ACTR3CQ9C0K3 210 aaPredicted RBP13.73□□□□□ -0.21
TSPAN3-206ENST00000559373 Q9UF83 564 aa13.73□□□□□ -0.21
TSPAN3-206ENST00000559373 LRCOL1A6NCL2 159 aa13.72□□□□□ -0.21
TSPAN3-206ENST00000559373 IBA57-AS1B1ANH7 110 aa13.72□□□□□ -0.21
TSPAN3-206ENST00000559373 INAFM2P0DMQ5 153 aa13.72□□□□□ -0.21
TSPAN3-206ENST00000559373 ZNF726P1Q15940 193 aa13.72□□□□□ -0.21
TSPAN3-206ENST00000559373 JPT2Q9H910 190 aa13.72□□□□□ -0.21
TSPAN3-206ENST00000559373 TMEM167BQ9NRX6 74 aa13.72□□□□□ -0.21
TSPAN3-206ENST00000559373 FAT1Q14517 4588 aa13.71□□□□□ -0.21
TSPAN3-206ENST00000559373 IGKV3D-20A0A0C4DH25 116 aa13.71□□□□□ -0.21
TSPAN3-206ENST00000559373 TRBV6-4A0A1B0GX49 114 aa13.71□□□□□ -0.21
TSPAN3-206ENST00000559373 MBP02144 154 aa13.71□□□□□ -0.21
TSPAN3-206ENST00000559373 FGF8P55075 233 aaPredicted RBP13.71□□□□□ -0.21
TSPAN3-206ENST00000559373 TIRAPP58753 221 aa13.71□□□□□ -0.21
TSPAN3-206ENST00000559373 SERF2P84101 59 aa13.71□□□□□ -0.21
TSPAN3-206ENST00000559373 ATP6V0E2Q8NHE4 81 aa13.71□□□□□ -0.21
TSPAN3-206ENST00000559373 SRRM2Q9UQ35 2752 aaKnown RBP13.71□□□□□ -0.22
TSPAN3-206ENST00000559373 FLG2Q5D862 2391 aaPredicted RBP13.71□□□□□ -0.22
TSPAN3-206ENST00000559373 FXYD6-FXYD2A0A087WZ82 144 aa13.7□□□□□ -0.22
TSPAN3-206ENST00000559373 IGLV5-52A0A0A0MRZ9 124 aa13.7□□□□□ -0.22
TSPAN3-206ENST00000559373 GAGE12JA6NER3 117 aa13.7□□□□□ -0.22
TSPAN3-206ENST00000559373 GAGE1Q13065 139 aa13.7□□□□□ -0.22
TSPAN3-206ENST00000559373 GAGE4Q13068 117 aa13.7□□□□□ -0.22
TSPAN3-206ENST00000559373 GAGE5Q13069 117 aa13.7□□□□□ -0.22
TSPAN3-206ENST00000559373 LGALSLQ3ZCW2 172 aaPredicted RBP13.7□□□□□ -0.22
TSPAN3-206ENST00000559373 GAGE13Q4V321 117 aa13.7□□□□□ -0.22
TSPAN3-206ENST00000559373 OR2T35Q8NGX2 323 aa13.7□□□□□ -0.22
TSPAN3-206ENST00000559373 TNFSF18Q9UNG2 199 aa13.7□□□□□ -0.22
TSPAN3-206ENST00000559373 ARL2-SNX15V9GYD0 113 aa13.7□□□□□ -0.22
TSPAN3-206ENST00000559373 RNF222A6NCQ9 220 aa13.69□□□□□ -0.22
TSPAN3-206ENST00000559373 IFNA7P01567 189 aa13.69□□□□□ -0.22
TSPAN3-206ENST00000559373 S100A4P26447 101 aaKnown RBP13.69□□□□□ -0.22
TSPAN3-206ENST00000559373 LELP1Q5T871 98 aa13.69□□□□□ -0.22
TSPAN3-206ENST00000559373 FRZBQ92765 325 aa13.69□□□□□ -0.22
TSPAN3-206ENST00000559373 SAMD10Q9BYL1 202 aa13.69□□□□□ -0.22
TSPAN3-206ENST00000559373 GTSF1LQ9H1H1 148 aa13.69□□□□□ -0.22
TSPAN3-206ENST00000559373 INO80EQ8NBZ0 244 aaPredicted RBP13.68□□□□□ -0.22
TSPAN3-206ENST00000559373 PARLQ9H300 379 aa13.68□□□□□ -0.22
TSPAN3-206ENST00000559373 M0R036 132 aa13.67□□□□□ -0.22
TSPAN3-206ENST00000559373 PTTG1O95997 202 aa13.67□□□□□ -0.22
TSPAN3-206ENST00000559373 MGST1P10620 155 aaKnown RBP13.67□□□□□ -0.22
TSPAN3-206ENST00000559373 SAPCD1Q5SSQ6 148 aa13.67□□□□□ -0.22
TSPAN3-206ENST00000559373 C14orf178Q8N769 122 aaPredicted RBP13.67□□□□□ -0.22
TSPAN3-206ENST00000559373 A0A1W2PRE2 83 aa13.66□□□□□ -0.22
TSPAN3-206ENST00000559373 H3BVH4 76 aa13.66□□□□□ -0.22
TSPAN3-206ENST00000559373 LECT2O14960 151 aa13.66□□□□□ -0.22
TSPAN3-206ENST00000559373 GIPP09681 153 aaPredicted RBP13.66□□□□□ -0.22
TSPAN3-206ENST00000559373 WFDC2Q14508 124 aa13.66□□□□□ -0.22
TSPAN3-206ENST00000559373 Q8N814 137 aa13.66□□□□□ -0.22
TSPAN3-206ENST00000559373 CTXND1A0A1B0GTU2 59 aa13.65□□□□□ -0.22
TSPAN3-206ENST00000559373 GRIFINA4D1Z8 144 aa13.65□□□□□ -0.22
TSPAN3-206ENST00000559373 FABP5P3A8MUU1 101 aa13.65□□□□□ -0.22
TSPAN3-206ENST00000559373 PEX7O00628 323 aa13.65□□□□□ -0.22
TSPAN3-206ENST00000559373 CIDEAO60543 219 aa13.65□□□□□ -0.22
TSPAN3-206ENST00000559373 ASIPP42127 132 aa13.65□□□□□ -0.22
TSPAN3-206ENST00000559373 CRIP1P50238 77 aa13.65□□□□□ -0.22
TSPAN3-206ENST00000559373 DMRTA1Q5VZB9 504 aa13.65□□□□□ -0.22
TSPAN3-206ENST00000559373 Q86TA4 180 aa13.65□□□□□ -0.22
TSPAN3-206ENST00000559373 FAM30AQ9NZY2 134 aa13.65□□□□□ -0.22
TSPAN3-206ENST00000559373 BORCS7-ASMTA0A0B4J1R7 106 aa13.64□□□□□ -0.23
TSPAN3-206ENST00000559373 FAM74A7A6NL05 159 aa13.64□□□□□ -0.23
TSPAN3-206ENST00000559373 B4DEV8 164 aa13.64□□□□□ -0.23
TSPAN3-206ENST00000559373 DAZ4Q86SG3 579 aaKnown RBP13.64□□□□□ -0.23
TSPAN3-206ENST00000559373 PTH2Q96A98 100 aa13.64□□□□□ -0.23
TSPAN3-206ENST00000559373 ZC2HC1AQ96GY0 325 aa13.64□□□□□ -0.23
TSPAN3-206ENST00000559373 DAZ3Q9NR90 486 aaKnown RBP13.64□□□□□ -0.23
TSPAN3-206ENST00000559373 DMBT1Q9UGM3 2413 aaPredicted RBP13.64□□□□□ -0.23
TSPAN3-206ENST00000559373 A8MWV9 139 aa13.63□□□□□ -0.23
TSPAN3-206ENST00000559373 VPS13BQ7Z7G8 4022 aa13.62□□□□□ -0.23
TSPAN3-206ENST00000559373 TMSB15BA0A087X1C1 80 aa13.62□□□□□ -0.23
TSPAN3-206ENST00000559373 FAM74A4Q5TZK3 123 aa13.62□□□□□ -0.23
TSPAN3-206ENST00000559373 DNAJC30Q96LL9 226 aa13.62□□□□□ -0.23
TSPAN3-206ENST00000559373 BATF3Q9NR55 127 aa13.62□□□□□ -0.23
TSPAN3-206ENST00000559373 A0A087WWL8 130 aa13.61□□□□□ -0.23
TSPAN3-206ENST00000559373 KRBOX1C9JBD0 128 aa13.61□□□□□ -0.23
TSPAN3-206ENST00000559373 SH2D1AO60880 128 aa13.61□□□□□ -0.23
TSPAN3-206ENST00000559373 ARMS2P0C7Q2 107 aa13.61□□□□□ -0.23
TSPAN3-206ENST00000559373 AKR1C8PQ5T2L2 129 aa13.61□□□□□ -0.23
TSPAN3-206ENST00000559373 UFSP1Q6NVU6 142 aa13.61□□□□□ -0.23
TSPAN3-206ENST00000559373 G3V3Q6 166 aa13.6□□□□□ -0.23
TSPAN3-206ENST00000559373 LINC00694P0DN24 101 aa13.6□□□□□ -0.23
TSPAN3-206ENST00000559373 ZFP2Q6ZN57 461 aa13.6□□□□□ -0.23
TSPAN3-206ENST00000559373 NTN5Q8WTR8 489 aaPredicted RBP13.6□□□□□ -0.23
TSPAN3-206ENST00000559373 IL36BQ9NZH7 164 aa13.6□□□□□ -0.23
TSPAN3-206ENST00000559373 HERC1Q15751 4861 aa13.59□□□□□ -0.23
TSPAN3-206ENST00000559373 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.59□□□□□ -0.23
TSPAN3-206ENST00000559373 SMLR1H3BR10 107 aa13.59□□□□□ -0.23
TSPAN3-206ENST00000559373 MAP1LC3B2A6NCE7 125 aa13.58□□□□□ -0.24
TSPAN3-206ENST00000559373 FAM229AH3BQW9 127 aa13.58□□□□□ -0.24
TSPAN3-206ENST00000559373 ARPC5O15511 151 aa13.58□□□□□ -0.24
TSPAN3-206ENST00000559373 FHITP49789 147 aa13.58□□□□□ -0.24
TSPAN3-206ENST00000559373 LINC01620Q4KN68 170 aa13.58□□□□□ -0.24
TSPAN3-206ENST00000559373 CST9LP1Q5W188 147 aa13.58□□□□□ -0.24
TSPAN3-206ENST00000559373 MAP1LC3BQ9GZQ8 125 aa13.58□□□□□ -0.24
TSPAN3-206ENST00000559373 CYTL1Q9NRR1 136 aa13.58□□□□□ -0.24
TSPAN3-206ENST00000559373 M0R381 172 aa13.57□□□□□ -0.24
TSPAN3-206ENST00000559373 OR11H4Q8NGC9 324 aa13.57□□□□□ -0.24
TSPAN3-206ENST00000559373 BAALCQ8WXS3 180 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms