RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 FAM74A7A6NL05 159 aa4.24□□□□□ -1.73
LRRC28-209ENST00000558861 KLLNB2CW77 178 aa4.24□□□□□ -1.73
LRRC28-209ENST00000558861 M0R2Z0 102 aa4.24□□□□□ -1.73
LRRC28-209ENST00000558861 DUSP14O95147 198 aaKnown RBP4.24□□□□□ -1.73
LRRC28-209ENST00000558861 CA1P00915 261 aaPredicted RBP4.24□□□□□ -1.73
LRRC28-209ENST00000558861 IGKV2D-40P01614 121 aaPredicted RBP4.24□□□□□ -1.73
LRRC28-209ENST00000558861 SLC25A5P05141 298 aaKnown RBP4.24□□□□□ -1.73
LRRC28-209ENST00000558861 CRISP2P16562 243 aa4.24□□□□□ -1.73
LRRC28-209ENST00000558861 APOC4P55056 127 aa4.24□□□□□ -1.73
LRRC28-209ENST00000558861 HIST1H1AQ02539 215 aaPredicted RBP4.24□□□□□ -1.73
LRRC28-209ENST00000558861 ERCC8Q13216 396 aa4.24□□□□□ -1.73
LRRC28-209ENST00000558861 DEFB135Q30KP9 77 aa4.24□□□□□ -1.73
LRRC28-209ENST00000558861 LCE1FQ5T754 118 aa4.24□□□□□ -1.73
LRRC28-209ENST00000558861 EIF5AL1Q6IS14 154 aaKnown RBP4.24□□□□□ -1.73
LRRC28-209ENST00000558861 EBLN2Q6P2I7 272 aa4.24□□□□□ -1.73
LRRC28-209ENST00000558861 MORN3Q6PF18 240 aaPredicted RBP4.24□□□□□ -1.73
LRRC28-209ENST00000558861 ALKAL2Q6UX46 152 aa4.24□□□□□ -1.73
LRRC28-209ENST00000558861 LINC00518Q8N0U6 118 aa4.24□□□□□ -1.73
LRRC28-209ENST00000558861 C1orf158Q8N1D5 194 aa4.24□□□□□ -1.73
LRRC28-209ENST00000558861 SFT2D1Q8WV19 159 aa4.24□□□□□ -1.73
LRRC28-209ENST00000558861 EDA2RQ9HAV5 297 aa4.24□□□□□ -1.73
LRRC28-209ENST00000558861 RYR2Q92736 4967 aa4.24□□□□□ -1.73
LRRC28-209ENST00000558861 TRAV8-1A0A0A6YYK1 113 aa4.23□□□□□ -1.73
LRRC28-209ENST00000558861 IGHV3-16A0A0C4DH30 117 aa4.23□□□□□ -1.73
LRRC28-209ENST00000558861 TRBV7-9A0A0J9YWB2 115 aa4.23□□□□□ -1.73
LRRC28-209ENST00000558861 PLAC8L1A1L4L8 177 aa4.23□□□□□ -1.73
LRRC28-209ENST00000558861 RPL37AP8A6NKH3 93 aa4.23□□□□□ -1.73
LRRC28-209ENST00000558861 ZNF324O75467 553 aaPredicted RBP4.23□□□□□ -1.73
LRRC28-209ENST00000558861 TCRAP04437 139 aa4.23□□□□□ -1.73
LRRC28-209ENST00000558861 NMBP08949 121 aa4.23□□□□□ -1.73
LRRC28-209ENST00000558861 GNG5P63218 68 aa4.23□□□□□ -1.73
LRRC28-209ENST00000558861 SPINK13Q1W4C9 94 aa4.23□□□□□ -1.73
LRRC28-209ENST00000558861 PRR9Q5T870 116 aa4.23□□□□□ -1.73
LRRC28-209ENST00000558861 TEX261Q6UWH6 196 aa4.23□□□□□ -1.73
LRRC28-209ENST00000558861 Q6ZQT7 251 aa4.23□□□□□ -1.73
LRRC28-209ENST00000558861 Q8NAQ8 132 aa4.23□□□□□ -1.73
LRRC28-209ENST00000558861 C5orf17Q8NAS9 161 aa4.23□□□□□ -1.73
LRRC28-209ENST00000558861 OR4B1Q8NGF8 309 aa4.23□□□□□ -1.73
LRRC28-209ENST00000558861 LRRC20Q8TCA0 184 aa4.23□□□□□ -1.73
LRRC28-209ENST00000558861 IGF2BP2-AS1Q96M15 143 aa4.23□□□□□ -1.73
LRRC28-209ENST00000558861 LINC00477Q96M19 166 aa4.23□□□□□ -1.73
LRRC28-209ENST00000558861 SPXQ9BT56 116 aa4.23□□□□□ -1.73
LRRC28-209ENST00000558861 XCL2Q9UBD3 114 aa4.23□□□□□ -1.73
LRRC28-209ENST00000558861 KLF12Q9Y4X4 402 aa4.23□□□□□ -1.73
LRRC28-209ENST00000558861 DNAH2Q9P225 4427 aa4.23□□□□□ -1.73
LRRC28-209ENST00000558861 TRAV12-2A0A075B6T6 113 aa4.22□□□□□ -1.73
LRRC28-209ENST00000558861 ATP5G3P48201 142 aa4.22□□□□□ -1.73
LRRC28-209ENST00000558861 ZNF138P52744 262 aa4.22□□□□□ -1.73
LRRC28-209ENST00000558861 FXYD7P58549 80 aa4.22□□□□□ -1.73
LRRC28-209ENST00000558861 IFITM2Q01629 132 aa4.22□□□□□ -1.73
LRRC28-209ENST00000558861 REG3GQ6UW15 175 aa4.22□□□□□ -1.73
LRRC28-209ENST00000558861 GOLT1AQ6ZVE7 132 aa4.22□□□□□ -1.73
LRRC28-209ENST00000558861 ZNF680Q8NEM1 530 aa4.22□□□□□ -1.73
LRRC28-209ENST00000558861 OR10J6PQ8NGY7 276 aa4.22□□□□□ -1.73
LRRC28-209ENST00000558861 Q8TAT8 98 aa4.22□□□□□ -1.73
LRRC28-209ENST00000558861 RXFP4Q8TDU9 374 aa4.22□□□□□ -1.73
LRRC28-209ENST00000558861 ZNF492Q9P255 531 aa4.22□□□□□ -1.73
LRRC28-209ENST00000558861 EPDR1Q9UM22 224 aa4.22□□□□□ -1.73
LRRC28-209ENST00000558861 LENEPQ9Y5L5 61 aa4.22□□□□□ -1.73
LRRC28-209ENST00000558861 U3KQK5 164 aa4.22□□□□□ -1.73
LRRC28-209ENST00000558861 DNAH10Q8IVF4 4471 aa4.21□□□□□ -1.73
LRRC28-209ENST00000558861 TRBV6-1A0A0K0K1D8 114 aa4.21□□□□□ -1.74
LRRC28-209ENST00000558861 A0A1B0GV50 99 aa4.21□□□□□ -1.74
LRRC28-209ENST00000558861 SERTM2A0A1B0GWG4 89 aa4.21□□□□□ -1.74
LRRC28-209ENST00000558861 PEX7O00628 323 aa4.21□□□□□ -1.74
LRRC28-209ENST00000558861 PRM2P04554 102 aa4.21□□□□□ -1.74
LRRC28-209ENST00000558861 CDKN1BP46527 198 aa4.21□□□□□ -1.74
LRRC28-209ENST00000558861 UBE2G2P60604 165 aa4.21□□□□□ -1.74
LRRC28-209ENST00000558861 NUTF2P61970 127 aaKnown RBP4.21□□□□□ -1.74
LRRC28-209ENST00000558861 Q6AWC8 147 aa4.21□□□□□ -1.74
LRRC28-209ENST00000558861 CYB561D1Q8N8Q1 229 aa4.21□□□□□ -1.74
LRRC28-209ENST00000558861 TMEM75Q8N9X5 138 aa4.21□□□□□ -1.74
LRRC28-209ENST00000558861 OR11H2Q8NH07 326 aa4.21□□□□□ -1.74
LRRC28-209ENST00000558861 RASL10AQ92737 203 aa4.21□□□□□ -1.74
LRRC28-209ENST00000558861 LINC00467Q9BRT7 94 aa4.21□□□□□ -1.74
LRRC28-209ENST00000558861 TCEAL7Q9BRU2 100 aa4.21□□□□□ -1.74
LRRC28-209ENST00000558861 NKX6-2Q9C056 277 aaPredicted RBP4.21□□□□□ -1.74
LRRC28-209ENST00000558861 C11orf68Q9H3H3 251 aaKnown RBP4.21□□□□□ -1.74
LRRC28-209ENST00000558861 Q9HAA7 133 aa4.21□□□□□ -1.74
LRRC28-209ENST00000558861 TRBV20OR9-2A0A075B6H5 130 aa4.2□□□□□ -1.74
LRRC28-209ENST00000558861 INSP01308 110 aa4.2□□□□□ -1.74
LRRC28-209ENST00000558861 HBE1P02100 147 aa4.2□□□□□ -1.74
LRRC28-209ENST00000558861 BCL2P10415 239 aa4.2□□□□□ -1.74
LRRC28-209ENST00000558861 TSPOP30536 169 aa4.2□□□□□ -1.74
LRRC28-209ENST00000558861 CSN1S1P47710 185 aa4.2□□□□□ -1.74
LRRC28-209ENST00000558861 PPT1P50897 306 aa4.2□□□□□ -1.74
LRRC28-209ENST00000558861 ZNF80P51504 273 aaPredicted RBP4.2□□□□□ -1.74
LRRC28-209ENST00000558861 SSTP61278 116 aa4.2□□□□□ -1.74
LRRC28-209ENST00000558861 BTN1A1Q13410 526 aa4.2□□□□□ -1.74
LRRC28-209ENST00000558861 Q86TA4 180 aa4.2□□□□□ -1.74
LRRC28-209ENST00000558861 IQCF2Q8IXL9 164 aa4.2□□□□□ -1.74
LRRC28-209ENST00000558861 POM121L12Q8N7R1 296 aa4.2□□□□□ -1.74
LRRC28-209ENST00000558861 HIST1H2BAQ96A08 127 aa4.2□□□□□ -1.74
LRRC28-209ENST00000558861 RARRES2Q99969 163 aa4.2□□□□□ -1.74
LRRC28-209ENST00000558861 C20orf144Q9BQM9 153 aa4.2□□□□□ -1.74
LRRC28-209ENST00000558861 MANBALQ9NQG1 85 aa4.2□□□□□ -1.74
LRRC28-209ENST00000558861 GNG13Q9P2W3 67 aa4.2□□□□□ -1.74
LRRC28-209ENST00000558861 PSG8Q9UQ74 426 aa4.2□□□□□ -1.74
LRRC28-209ENST00000558861 HYDINQ4G0P3 5121 aa4.19□□□□□ -1.74
LRRC28-209ENST00000558861 C7orf71A4D174 169 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms