RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 KLK9Q9UKQ9 250 aa12.32□□□□□ -0.44
HMBOX1-212ENST00000558662 CSDC2Q9Y534 153 aaKnown RBP12.32□□□□□ -0.44
HMBOX1-212ENST00000558662 J3KT08 172 aa12.31□□□□□ -0.44
HMBOX1-212ENST00000558662 BUB3O43684 328 aa12.31□□□□□ -0.44
HMBOX1-212ENST00000558662 TGFAP01135 160 aa12.31□□□□□ -0.44
HMBOX1-212ENST00000558662 CITED2Q99967 270 aaPredicted RBP12.31□□□□□ -0.44
HMBOX1-212ENST00000558662 PRAC2D3DTV9 90 aa12.3□□□□□ -0.44
HMBOX1-212ENST00000558662 NDUFA7O95182 113 aa12.3□□□□□ -0.44
HMBOX1-212ENST00000558662 TCF15Q12870 199 aa12.3□□□□□ -0.44
HMBOX1-212ENST00000558662 PPDPFQ9H3Y8 114 aa12.3□□□□□ -0.44
HMBOX1-212ENST00000558662 LAMA1P25391 3075 aa12.3□□□□□ -0.44
HMBOX1-212ENST00000558662 VCYO14598 125 aa12.3□□□□□ -0.44
HMBOX1-212ENST00000558662 SEM1Q6ZVN7 128 aa12.3□□□□□ -0.44
HMBOX1-212ENST00000558662 LINC00526Q96FQ7 95 aa12.3□□□□□ -0.44
HMBOX1-212ENST00000558662 TRAV21A0A0B4J279 112 aa12.29□□□□□ -0.44
HMBOX1-212ENST00000558662 PATE3B3GLJ2 98 aa12.29□□□□□ -0.44
HMBOX1-212ENST00000558662 CXCL5P42830 114 aa12.29□□□□□ -0.44
HMBOX1-212ENST00000558662 TSPEAR-AS2P59090 65 aa12.29□□□□□ -0.44
HMBOX1-212ENST00000558662 ADIPOQQ15848 244 aa12.29□□□□□ -0.44
HMBOX1-212ENST00000558662 ZNF56Q15929 161 aa12.29□□□□□ -0.44
HMBOX1-212ENST00000558662 LINC00477Q96M19 166 aa12.29□□□□□ -0.44
HMBOX1-212ENST00000558662 MSRB2Q9Y3D2 182 aa12.29□□□□□ -0.44
HMBOX1-212ENST00000558662 TMEM223A0PJW6 202 aa12.28□□□□□ -0.44
HMBOX1-212ENST00000558662 H7C423 109 aa12.28□□□□□ -0.44
HMBOX1-212ENST00000558662 NXPH4O95158 308 aa12.28□□□□□ -0.44
HMBOX1-212ENST00000558662 TSHBP01222 138 aa12.28□□□□□ -0.44
HMBOX1-212ENST00000558662 PRB4P10163 310 aaPredicted RBP12.28□□□□□ -0.44
HMBOX1-212ENST00000558662 GPHB5Q86YW7 130 aa12.28□□□□□ -0.44
HMBOX1-212ENST00000558662 TP53TG1Q9Y2A0 90 aa12.28□□□□□ -0.44
HMBOX1-212ENST00000558662 C9orf153Q5TBE3 101 aa12.28□□□□□ -0.44
HMBOX1-212ENST00000558662 MUSTN1Q8IVN3 82 aa12.28□□□□□ -0.44
HMBOX1-212ENST00000558662 CCL17Q92583 94 aa12.28□□□□□ -0.44
HMBOX1-212ENST00000558662 ZFAND3Q9H8U3 227 aa12.28□□□□□ -0.44
HMBOX1-212ENST00000558662 PHLDA3Q9Y5J5 127 aa12.28□□□□□ -0.44
HMBOX1-212ENST00000558662 ABCA1O95477 2261 aa12.27□□□□□ -0.44
HMBOX1-212ENST00000558662 TRIAP1O43715 76 aa12.27□□□□□ -0.45
HMBOX1-212ENST00000558662 POLR2KP53803 58 aaKnown RBP12.27□□□□□ -0.45
HMBOX1-212ENST00000558662 LINC00643Q86TS7 51 aa12.27□□□□□ -0.45
HMBOX1-212ENST00000558662 RPL39LQ96EH5 51 aaKnown RBP12.27□□□□□ -0.45
HMBOX1-212ENST00000558662 METTL26Q96S19 204 aa12.27□□□□□ -0.45
HMBOX1-212ENST00000558662 CHCHD5Q9BSY4 110 aa12.27□□□□□ -0.45
HMBOX1-212ENST00000558662 ICOSQ9Y6W8 199 aa12.27□□□□□ -0.45
HMBOX1-212ENST00000558662 EIF4EBP3O60516 100 aaPredicted RBP12.26□□□□□ -0.45
HMBOX1-212ENST00000558662 IGHV4-39P01824 125 aa12.26□□□□□ -0.45
HMBOX1-212ENST00000558662 CD3EP07766 207 aa12.26□□□□□ -0.45
HMBOX1-212ENST00000558662 IGFL4Q6B9Z1 124 aa12.26□□□□□ -0.45
HMBOX1-212ENST00000558662 DPM3Q9P2X0 92 aa12.26□□□□□ -0.45
HMBOX1-212ENST00000558662 CADP27708 2225 aa12.26□□□□□ -0.45
HMBOX1-212ENST00000558662 TRBV6-5A0A0K0K1A5 114 aa12.25□□□□□ -0.45
HMBOX1-212ENST00000558662 A0A1W2PNU3 283 aaPredicted RBP12.25□□□□□ -0.45
HMBOX1-212ENST00000558662 LST1O00453 97 aa12.25□□□□□ -0.45
HMBOX1-212ENST00000558662 S100A4P26447 101 aaKnown RBP12.25□□□□□ -0.45
HMBOX1-212ENST00000558662 RHOHQ15669 191 aa12.25□□□□□ -0.45
HMBOX1-212ENST00000558662 OR13C6PQ8NH95 151 aa12.25□□□□□ -0.45
HMBOX1-212ENST00000558662 NPFFO15130 113 aa12.25□□□□□ -0.45
HMBOX1-212ENST00000558662 ID1P41134 155 aa12.25□□□□□ -0.45
HMBOX1-212ENST00000558662 C9orf139Q6ZV77 190 aa12.25□□□□□ -0.45
HMBOX1-212ENST00000558662 TMEM219Q86XT9 240 aa12.25□□□□□ -0.45
HMBOX1-212ENST00000558662 ZNF256Q9Y2P7 627 aaPredicted RBP12.25□□□□□ -0.45
HMBOX1-212ENST00000558662 SMIM9A6NGZ8 99 aa12.24□□□□□ -0.45
HMBOX1-212ENST00000558662 ZNRF2Q8NHG8 242 aa12.24□□□□□ -0.45
HMBOX1-212ENST00000558662 A0A0G2JNJ9 132 aa12.23□□□□□ -0.45
HMBOX1-212ENST00000558662 TRBV27A0A0K0K1C4 114 aa12.23□□□□□ -0.45
HMBOX1-212ENST00000558662 OOSP1A8MZH6 123 aa12.23□□□□□ -0.45
HMBOX1-212ENST00000558662 MGPP08493 103 aa12.23□□□□□ -0.45
HMBOX1-212ENST00000558662 RNF182Q8N6D2 247 aa12.23□□□□□ -0.45
HMBOX1-212ENST00000558662 C14orf178Q8N769 122 aaPredicted RBP12.23□□□□□ -0.45
HMBOX1-212ENST00000558662 Q9UFV3 132 aa12.23□□□□□ -0.45
HMBOX1-212ENST00000558662 TRGV11A0A075B6L2 103 aa12.23□□□□□ -0.45
HMBOX1-212ENST00000558662 FAM236AA0A1B0GUQ0 79 aa12.23□□□□□ -0.45
HMBOX1-212ENST00000558662 FAM236BA0A1B0GV22 79 aa12.23□□□□□ -0.45
HMBOX1-212ENST00000558662 OVOL1O14753 267 aa12.23□□□□□ -0.45
HMBOX1-212ENST00000558662 LINC00694P0DN24 101 aa12.23□□□□□ -0.45
HMBOX1-212ENST00000558662 EMP1P54849 157 aa12.23□□□□□ -0.45
HMBOX1-212ENST00000558662 SDIM1Q6ZPB5 146 aa12.23□□□□□ -0.45
HMBOX1-212ENST00000558662 WDR87Q6ZQQ6 2873 aa12.22□□□□□ -0.45
HMBOX1-212ENST00000558662 NSUN5P1Q3KNT7 163 aa12.22□□□□□ -0.45
HMBOX1-212ENST00000558662 APRG1Q8IVJ8 170 aa12.22□□□□□ -0.45
HMBOX1-212ENST00000558662 S4R3C0 116 aa12.22□□□□□ -0.45
HMBOX1-212ENST00000558662 AHCTF1Q8WYP5 2266 aa12.22□□□□□ -0.45
HMBOX1-212ENST00000558662 VCANP13611 3396 aa12.21□□□□□ -0.45
HMBOX1-212ENST00000558662 CRYGAP11844 174 aa12.21□□□□□ -0.45
HMBOX1-212ENST00000558662 RNASE6Q93091 150 aaKnown RBP12.21□□□□□ -0.45
HMBOX1-212ENST00000558662 U3KQE9 123 aa12.21□□□□□ -0.45
HMBOX1-212ENST00000558662 A0A0J9YXY3 114 aa12.2□□□□□ -0.46
HMBOX1-212ENST00000558662 H7C2G1 150 aa12.2□□□□□ -0.46
HMBOX1-212ENST00000558662 ELANEP08246 267 aa12.2□□□□□ -0.46
HMBOX1-212ENST00000558662 COX7A1P24310 79 aa12.2□□□□□ -0.46
HMBOX1-212ENST00000558662 FAM110DQ8TAY7 271 aaPredicted RBP12.2□□□□□ -0.46
HMBOX1-212ENST00000558662 ZDBF2Q9HCK1 2354 aa12.2□□□□□ -0.46
HMBOX1-212ENST00000558662 TIMM17BO60830 172 aa12.2□□□□□ -0.46
HMBOX1-212ENST00000558662 COX7CP15954 63 aa12.2□□□□□ -0.46
HMBOX1-212ENST00000558662 HERVK_113P63121 156 aa12.2□□□□□ -0.46
HMBOX1-212ENST00000558662 KIF25-AS1Q9Y6Z4 181 aa12.2□□□□□ -0.46
HMBOX1-212ENST00000558662 PLCE1Q9P212 2302 aa12.2□□□□□ -0.46
HMBOX1-212ENST00000558662 LY6G5BQ8NDX9 201 aa12.19□□□□□ -0.46
HMBOX1-212ENST00000558662 ZGRF1Q86YA3 2104 aa12.18□□□□□ -0.46
HMBOX1-212ENST00000558662 ZNF22P17026 224 aaPredicted RBP12.18□□□□□ -0.46
HMBOX1-212ENST00000558662 ZFAND2AQ8N6M9 145 aa12.18□□□□□ -0.46
HMBOX1-212ENST00000558662 FDCSPQ8NFU4 85 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms