RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 IFITM2Q01629 132 aa5.9□□□□□ -1.46
TPM1-213ENST00000558400 ZNF674Q2M3X9 581 aa5.9□□□□□ -1.46
TPM1-213ENST00000558400 SOHLH1Q5JUK2 328 aa5.9□□□□□ -1.46
TPM1-213ENST00000558400 DNLZQ5SXM8 178 aa5.9□□□□□ -1.46
TPM1-213ENST00000558400 LINC00336Q6ZUF6 198 aa5.9□□□□□ -1.46
TPM1-213ENST00000558400 SH2D6Q7Z4S9 175 aa5.9□□□□□ -1.46
TPM1-213ENST00000558400 BAGE2Q86Y30 109 aa5.9□□□□□ -1.46
TPM1-213ENST00000558400 VSIG2Q96IQ7 327 aa5.9□□□□□ -1.46
TPM1-213ENST00000558400 C9orf85Q96MD7 179 aa5.9□□□□□ -1.46
TPM1-213ENST00000558400 IL36BQ9NZH7 164 aa5.9□□□□□ -1.46
TPM1-213ENST00000558400 GNG13Q9P2W3 67 aa5.9□□□□□ -1.46
TPM1-213ENST00000558400 C11orf21Q9P2W6 132 aa5.9□□□□□ -1.46
TPM1-213ENST00000558400 ICOSQ9Y6W8 199 aa5.9□□□□□ -1.46
TPM1-213ENST00000558400 A0A096LPF7 62 aa5.89□□□□□ -1.47
TPM1-213ENST00000558400 C9JCJ5 164 aa5.89□□□□□ -1.47
TPM1-213ENST00000558400 PDE6DO43924 150 aa5.89□□□□□ -1.47
TPM1-213ENST00000558400 RNASE3P12724 160 aaKnown RBP5.89□□□□□ -1.47
TPM1-213ENST00000558400 CRIP1P50238 77 aa5.89□□□□□ -1.47
TPM1-213ENST00000558400 CCL20P78556 96 aa5.89□□□□□ -1.47
TPM1-213ENST00000558400 ESRGQ1W209 222 aa5.89□□□□□ -1.47
TPM1-213ENST00000558400 NEGR1Q7Z3B1 354 aa5.89□□□□□ -1.47
TPM1-213ENST00000558400 PCNPQ8WW12 178 aaKnown RBP5.89□□□□□ -1.47
TPM1-213ENST00000558400 ZC2HC1AQ96GY0 325 aa5.89□□□□□ -1.47
TPM1-213ENST00000558400 ZNF479Q96JC4 524 aa5.89□□□□□ -1.47
TPM1-213ENST00000558400 UPK3BQ9BT76 320 aa5.89□□□□□ -1.47
TPM1-213ENST00000558400 Q9H8V8 135 aa5.89□□□□□ -1.47
TPM1-213ENST00000558400 LINC00588Q9Y4M8 146 aa5.89□□□□□ -1.47
TPM1-213ENST00000558400 SCO2A0A1W2PP80 73 aa5.88□□□□□ -1.47
TPM1-213ENST00000558400 A8MWV9 139 aa5.88□□□□□ -1.47
TPM1-213ENST00000558400 KRBOX1C9JBD0 128 aa5.88□□□□□ -1.47
TPM1-213ENST00000558400 M0R2N4 97 aa5.88□□□□□ -1.47
TPM1-213ENST00000558400 RS1O15537 224 aa5.88□□□□□ -1.47
TPM1-213ENST00000558400 SH2D1AO60880 128 aa5.88□□□□□ -1.47
TPM1-213ENST00000558400 SFTA3P0C7M3 94 aa5.88□□□□□ -1.47
TPM1-213ENST00000558400 MEF2BQ02080 365 aaPredicted RBP5.88□□□□□ -1.47
TPM1-213ENST00000558400 Q6ZR54 194 aa5.88□□□□□ -1.47
TPM1-213ENST00000558400 SYT8Q8NBV8 401 aa5.88□□□□□ -1.47
TPM1-213ENST00000558400 ZNRF2Q8NHG8 242 aa5.88□□□□□ -1.47
TPM1-213ENST00000558400 C11orf52Q96A22 123 aa5.88□□□□□ -1.47
TPM1-213ENST00000558400 SMIM12Q96EX1 92 aa5.88□□□□□ -1.47
TPM1-213ENST00000558400 PRADC1Q9BSG0 188 aa5.88□□□□□ -1.47
TPM1-213ENST00000558400 MLST8Q9BVC4 326 aa5.88□□□□□ -1.47
TPM1-213ENST00000558400 BIN3Q9NQY0 253 aa5.88□□□□□ -1.47
TPM1-213ENST00000558400 VAX2Q9UIW0 290 aa5.88□□□□□ -1.47
TPM1-213ENST00000558400 MRPS16Q9Y3D3 137 aaKnown RBP5.88□□□□□ -1.47
TPM1-213ENST00000558400 KMT2AQ03164 3969 aa5.88□□□□□ -1.47
TPM1-213ENST00000558400 IGLV2-18A0A075B6J9 118 aa5.87□□□□□ -1.47
TPM1-213ENST00000558400 NBDYA0A0U1RRE5 68 aa5.87□□□□□ -1.47
TPM1-213ENST00000558400 TRBV6-4A0A1B0GX49 114 aa5.87□□□□□ -1.47
TPM1-213ENST00000558400 A0A1W2PPQ1 181 aa5.87□□□□□ -1.47
TPM1-213ENST00000558400 PGPEP1LA6NFU8 196 aa5.87□□□□□ -1.47
TPM1-213ENST00000558400 ARMS2P0C7Q2 107 aa5.87□□□□□ -1.47
TPM1-213ENST00000558400 MGST1P10620 155 aaKnown RBP5.87□□□□□ -1.47
TPM1-213ENST00000558400 GATA1P15976 413 aaPredicted RBP5.87□□□□□ -1.47
TPM1-213ENST00000558400 BTF3P20290 206 aaKnown RBP5.87□□□□□ -1.47
TPM1-213ENST00000558400 SRIP30626 198 aa5.87□□□□□ -1.47
TPM1-213ENST00000558400 RPL35P42766 123 aaKnown RBP5.87□□□□□ -1.47
TPM1-213ENST00000558400 TTC32Q5I0X7 151 aa5.87□□□□□ -1.47
TPM1-213ENST00000558400 ZNF506Q5JVG8 444 aa5.87□□□□□ -1.47
TPM1-213ENST00000558400 C1orf134Q5TEV5 83 aa5.87□□□□□ -1.47
TPM1-213ENST00000558400 CFAP126Q5VTH2 177 aa5.87□□□□□ -1.47
TPM1-213ENST00000558400 ZFP2Q6ZN57 461 aa5.87□□□□□ -1.47
TPM1-213ENST00000558400 PHLDA3Q9Y5J5 127 aa5.87□□□□□ -1.47
TPM1-213ENST00000558400 DNAH10Q8IVF4 4471 aa5.87□□□□□ -1.47
TPM1-213ENST00000558400 K7EP13 123 aa5.86□□□□□ -1.47
TPM1-213ENST00000558400 K7EQD1 137 aa5.86□□□□□ -1.47
TPM1-213ENST00000558400 M0R036 132 aa5.86□□□□□ -1.47
TPM1-213ENST00000558400 CXCL1P09341 107 aa5.86□□□□□ -1.47
TPM1-213ENST00000558400 MED14OSP0DP75 135 aa5.86□□□□□ -1.47
TPM1-213ENST00000558400 BCL2P10415 239 aa5.86□□□□□ -1.47
TPM1-213ENST00000558400 GYPEP15421 78 aa5.86□□□□□ -1.47
TPM1-213ENST00000558400 LYPD5Q6UWN5 251 aa5.86□□□□□ -1.47
TPM1-213ENST00000558400 DAZAP1Q96EP5 407 aaKnown RBP5.86□□□□□ -1.47
TPM1-213ENST00000558400 MED9Q9NWA0 146 aa5.86□□□□□ -1.47
TPM1-213ENST00000558400 NACAE9PAV3 2078 aa5.86□□□□□ -1.47
TPM1-213ENST00000558400 TRAV9-2A0A087WT02 112 aa5.85□□□□□ -1.47
TPM1-213ENST00000558400 XKRY2A2RUG3 117 aa5.85□□□□□ -1.47
TPM1-213ENST00000558400 RHODO00212 210 aa5.85□□□□□ -1.47
TPM1-213ENST00000558400 SIVA1O15304 175 aa5.85□□□□□ -1.47
TPM1-213ENST00000558400 GNG4P50150 75 aa5.85□□□□□ -1.47
TPM1-213ENST00000558400 TIRAPP58753 221 aa5.85□□□□□ -1.47
TPM1-213ENST00000558400 RHOHQ15669 191 aa5.85□□□□□ -1.47
TPM1-213ENST00000558400 ALKAL2Q6UX46 152 aa5.85□□□□□ -1.47
TPM1-213ENST00000558400 ZFP82Q8N141 532 aa5.85□□□□□ -1.47
TPM1-213ENST00000558400 SLC25A29Q8N8R3 303 aa5.85□□□□□ -1.47
TPM1-213ENST00000558400 LYPD6BQ8NI32 183 aa5.85□□□□□ -1.47
TPM1-213ENST00000558400 SCRT2Q9NQ03 307 aa5.85□□□□□ -1.47
TPM1-213ENST00000558400 GRIFINA4D1Z8 144 aa5.84□□□□□ -1.47
TPM1-213ENST00000558400 RBFOX3A6NFN3 312 aa5.84□□□□□ -1.47
TPM1-213ENST00000558400 H3BVH4 76 aa5.84□□□□□ -1.47
TPM1-213ENST00000558400 NDUFS6O75380 124 aaKnown RBP5.84□□□□□ -1.47
TPM1-213ENST00000558400 RPS20P60866 119 aaKnown RBP5.84□□□□□ -1.47
TPM1-213ENST00000558400 ZNF575Q86XF7 245 aa5.84□□□□□ -1.47
TPM1-213ENST00000558400 Q8N3U1 123 aa5.84□□□□□ -1.47
TPM1-213ENST00000558400 NHLRC2Q8NBF2 726 aa5.84□□□□□ -1.47
TPM1-213ENST00000558400 SSBP4Q9BWG4 385 aaPredicted RBP5.84□□□□□ -1.47
TPM1-213ENST00000558400 PARLQ9H300 379 aa5.84□□□□□ -1.47
TPM1-213ENST00000558400 TMSB15BA0A087X1C1 80 aa5.83□□□□□ -1.48
TPM1-213ENST00000558400 PRSS29PA6NIE9 313 aa5.83□□□□□ -1.48
TPM1-213ENST00000558400 TMEM250H0YL14 139 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms