RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 TPPP3Q9BW30 176 aa6.28□□□□□ -1.4
SPG11-207ENST00000558138 RAB19A4D1S5 217 aa6.27□□□□□ -1.41
SPG11-207ENST00000558138 PGPEP1LA6NFU8 196 aa6.27□□□□□ -1.41
SPG11-207ENST00000558138 H3BNG1 76 aa6.27□□□□□ -1.41
SPG11-207ENST00000558138 ARMS2P0C7Q2 107 aa6.27□□□□□ -1.41
SPG11-207ENST00000558138 RNASE3P12724 160 aaKnown RBP6.27□□□□□ -1.41
SPG11-207ENST00000558138 GYPEP15421 78 aa6.27□□□□□ -1.41
SPG11-207ENST00000558138 CRIP1P50238 77 aa6.27□□□□□ -1.41
SPG11-207ENST00000558138 CRYBA4P53673 196 aa6.27□□□□□ -1.41
SPG11-207ENST00000558138 RPL19P84098 196 aaKnown RBP6.27□□□□□ -1.41
SPG11-207ENST00000558138 FHL2Q14192 279 aa6.27□□□□□ -1.41
SPG11-207ENST00000558138 MRPL23Q16540 153 aaKnown RBP6.27□□□□□ -1.41
SPG11-207ENST00000558138 LINC01559Q495D7 138 aa6.27□□□□□ -1.41
SPG11-207ENST00000558138 TOR2AQ5JU69 321 aa6.27□□□□□ -1.41
SPG11-207ENST00000558138 FAM74A4Q5TZK3 123 aa6.27□□□□□ -1.41
SPG11-207ENST00000558138 PRADC1Q9BSG0 188 aa6.27□□□□□ -1.41
SPG11-207ENST00000558138 BIN3Q9NQY0 253 aa6.27□□□□□ -1.41
SPG11-207ENST00000558138 IL36BQ9NZH7 164 aa6.27□□□□□ -1.41
SPG11-207ENST00000558138 A8MWV9 139 aa6.26□□□□□ -1.41
SPG11-207ENST00000558138 P01737 135 aa6.26□□□□□ -1.41
SPG11-207ENST00000558138 FAM3BP58499 235 aaPredicted RBP6.26□□□□□ -1.41
SPG11-207ENST00000558138 SSTP61278 116 aa6.26□□□□□ -1.41
SPG11-207ENST00000558138 SPANXN1Q5VSR9 72 aa6.26□□□□□ -1.41
SPG11-207ENST00000558138 COX8CQ7Z4L0 72 aa6.26□□□□□ -1.41
SPG11-207ENST00000558138 ZFP82Q8N141 532 aa6.26□□□□□ -1.41
SPG11-207ENST00000558138 VSIG2Q96IQ7 327 aa6.26□□□□□ -1.41
SPG11-207ENST00000558138 LINC00588Q9Y4M8 146 aa6.26□□□□□ -1.41
SPG11-207ENST00000558138 PLECQ15149 4684 aaKnown RBP6.26□□□□□ -1.41
SPG11-207ENST00000558138 XKRY2A2RUG3 117 aa6.25□□□□□ -1.41
SPG11-207ENST00000558138 RS1O15537 224 aa6.25□□□□□ -1.41
SPG11-207ENST00000558138 CIDEAO60543 219 aa6.25□□□□□ -1.41
SPG11-207ENST00000558138 RPS20P60866 119 aaKnown RBP6.25□□□□□ -1.41
SPG11-207ENST00000558138 RHOHQ15669 191 aa6.25□□□□□ -1.41
SPG11-207ENST00000558138 CFAP126Q5VTH2 177 aa6.25□□□□□ -1.41
SPG11-207ENST00000558138 NEGR1Q7Z3B1 354 aa6.25□□□□□ -1.41
SPG11-207ENST00000558138 OR2D3Q8NGH3 330 aa6.25□□□□□ -1.41
SPG11-207ENST00000558138 SMIM12Q96EX1 92 aa6.25□□□□□ -1.41
SPG11-207ENST00000558138 PARLQ9H300 379 aa6.25□□□□□ -1.41
SPG11-207ENST00000558138 NACAE9PAV3 2078 aa6.25□□□□□ -1.41
SPG11-207ENST00000558138 MUC4Q99102 2169 aa6.25□□□□□ -1.41
SPG11-207ENST00000558138 DYNC2H1Q8NCM8 4307 aaKnown RBP6.24□□□□□ -1.41
SPG11-207ENST00000558138 MUC21A0A0G2JKD1 596 aa6.24□□□□□ -1.41
SPG11-207ENST00000558138 MUC21A0A140T8X8 626 aa6.24□□□□□ -1.41
SPG11-207ENST00000558138 K7EQD1 137 aa6.24□□□□□ -1.41
SPG11-207ENST00000558138 RHODO00212 210 aa6.24□□□□□ -1.41
SPG11-207ENST00000558138 SMIM17P0DL12 118 aa6.24□□□□□ -1.41
SPG11-207ENST00000558138 ZNF56Q15929 161 aa6.24□□□□□ -1.41
SPG11-207ENST00000558138 ESRGQ1W209 222 aa6.24□□□□□ -1.41
SPG11-207ENST00000558138 SOHLH1Q5JUK2 328 aa6.24□□□□□ -1.41
SPG11-207ENST00000558138 DMRTA1Q5VZB9 504 aa6.24□□□□□ -1.41
SPG11-207ENST00000558138 TEX261Q6UWH6 196 aa6.24□□□□□ -1.41
SPG11-207ENST00000558138 MLST8Q9BVC4 326 aa6.24□□□□□ -1.41
SPG11-207ENST00000558138 RYR2Q92736 4967 aa6.23□□□□□ -1.41
SPG11-207ENST00000558138 A0A087WWL8 130 aa6.23□□□□□ -1.41
SPG11-207ENST00000558138 LOC100131303A0A0U1RQF7 123 aa6.23□□□□□ -1.41
SPG11-207ENST00000558138 TMEM250H0YL14 139 aa6.23□□□□□ -1.41
SPG11-207ENST00000558138 GATA1P15976 413 aaPredicted RBP6.23□□□□□ -1.41
SPG11-207ENST00000558138 RAB14P61106 215 aa6.23□□□□□ -1.41
SPG11-207ENST00000558138 DNLZQ5SXM8 178 aa6.23□□□□□ -1.41
SPG11-207ENST00000558138 SH2D6Q7Z4S9 175 aa6.23□□□□□ -1.41
SPG11-207ENST00000558138 FER1L6-AS1Q8NA97 138 aa6.23□□□□□ -1.41
SPG11-207ENST00000558138 PTH2Q96A98 100 aa6.23□□□□□ -1.41
SPG11-207ENST00000558138 FAM210AQ96ND0 272 aa6.23□□□□□ -1.41
SPG11-207ENST00000558138 SMIM7Q9BQ49 75 aa6.23□□□□□ -1.41
SPG11-207ENST00000558138 Q9H8V8 135 aa6.23□□□□□ -1.41
SPG11-207ENST00000558138 JPT2Q9H910 190 aa6.23□□□□□ -1.41
SPG11-207ENST00000558138 MRPS16Q9Y3D3 137 aaKnown RBP6.23□□□□□ -1.41
SPG11-207ENST00000558138 RYR3Q15413 4870 aa6.23□□□□□ -1.41
SPG11-207ENST00000558138 TRBV6-4A0A1B0GX49 114 aa6.22□□□□□ -1.41
SPG11-207ENST00000558138 GAGE12JA6NER3 117 aa6.22□□□□□ -1.41
SPG11-207ENST00000558138 ZNF727A8MUV8 499 aa6.22□□□□□ -1.41
SPG11-207ENST00000558138 F5H697 171 aa6.22□□□□□ -1.41
SPG11-207ENST00000558138 NXPH4O95158 308 aa6.22□□□□□ -1.41
SPG11-207ENST00000558138 CXCL1P09341 107 aa6.22□□□□□ -1.41
SPG11-207ENST00000558138 MED14OSP0DP75 135 aa6.22□□□□□ -1.41
SPG11-207ENST00000558138 GZMBP10144 247 aa6.22□□□□□ -1.41
SPG11-207ENST00000558138 GAGE1Q13065 139 aa6.22□□□□□ -1.41
SPG11-207ENST00000558138 GAGE4Q13068 117 aa6.22□□□□□ -1.41
SPG11-207ENST00000558138 GAGE5Q13069 117 aa6.22□□□□□ -1.41
SPG11-207ENST00000558138 PEA15Q15121 130 aa6.22□□□□□ -1.41
SPG11-207ENST00000558138 GAGE13Q4V321 117 aa6.22□□□□□ -1.41
SPG11-207ENST00000558138 TTC32Q5I0X7 151 aa6.22□□□□□ -1.41
SPG11-207ENST00000558138 PIK3CD-AS1Q5SR53 167 aa6.22□□□□□ -1.41
SPG11-207ENST00000558138 ZFP2Q6ZN57 461 aa6.22□□□□□ -1.41
SPG11-207ENST00000558138 SLC25A29Q8N8R3 303 aa6.22□□□□□ -1.41
SPG11-207ENST00000558138 OR10AG1Q8NH19 301 aa6.22□□□□□ -1.41
SPG11-207ENST00000558138 ZNRF2Q8NHG8 242 aa6.22□□□□□ -1.41
SPG11-207ENST00000558138 TRBV20OR9-2A0A075B6H5 130 aa6.21□□□□□ -1.42
SPG11-207ENST00000558138 NBDYA0A0U1RRE5 68 aa6.21□□□□□ -1.42
SPG11-207ENST00000558138 SIVA1O15304 175 aa6.21□□□□□ -1.42
SPG11-207ENST00000558138 IGLV2-8P01709 118 aa6.21□□□□□ -1.42
SPG11-207ENST00000558138 MGPP08493 103 aa6.21□□□□□ -1.42
SPG11-207ENST00000558138 ERVFC1-1P60608 527 aa6.21□□□□□ -1.42
SPG11-207ENST00000558138 C1orf134Q5TEV5 83 aa6.21□□□□□ -1.42
SPG11-207ENST00000558138 LYPD5Q6UWN5 251 aa6.21□□□□□ -1.42
SPG11-207ENST00000558138 LYPD6BQ8NI32 183 aa6.21□□□□□ -1.42
SPG11-207ENST00000558138 SFRP2Q96HF1 295 aa6.21□□□□□ -1.42
SPG11-207ENST00000558138 AP1S3Q96PC3 154 aa6.21□□□□□ -1.42
SPG11-207ENST00000558138 SAMD10Q9BYL1 202 aa6.21□□□□□ -1.42
SPG11-207ENST00000558138 RNASE7Q9H1E1 156 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms