RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 FAM210BQ96KR6 192 aa5.37□□□□□ -1.55
SPG11-205ENST00000558080 SLC50A1Q9BRV3 221 aa5.37□□□□□ -1.55
SPG11-205ENST00000558080 NDUFAF3Q9BU61 184 aa5.37□□□□□ -1.55
SPG11-205ENST00000558080 PPP1R14DQ9NXH3 145 aa5.37□□□□□ -1.55
SPG11-205ENST00000558080 DKK2Q9UBU2 259 aa5.37□□□□□ -1.55
SPG11-205ENST00000558080 URGCP-MRPS24S4R325 110 aa5.37□□□□□ -1.55
SPG11-205ENST00000558080 TRAV12-2A0A075B6T6 113 aa5.36□□□□□ -1.55
SPG11-205ENST00000558080 TGIF2-C20orf24A0A0A6YYL0 155 aa5.36□□□□□ -1.55
SPG11-205ENST00000558080 TRAV34A0A0B4J273 112 aa5.36□□□□□ -1.55
SPG11-205ENST00000558080 SLC17A3O00476 420 aa5.36□□□□□ -1.55
SPG11-205ENST00000558080 CRXO43186 299 aaPredicted RBP5.36□□□□□ -1.55
SPG11-205ENST00000558080 LTAP01374 205 aa5.36□□□□□ -1.55
SPG11-205ENST00000558080 IGLV2-8P01709 118 aa5.36□□□□□ -1.55
SPG11-205ENST00000558080 AMBPP02760 352 aa5.36□□□□□ -1.55
SPG11-205ENST00000558080 PFN1P07737 140 aaKnown RBP5.36□□□□□ -1.55
SPG11-205ENST00000558080 CXCL1P09341 107 aa5.36□□□□□ -1.55
SPG11-205ENST00000558080 RPS10P46783 165 aaKnown RBP5.36□□□□□ -1.55
SPG11-205ENST00000558080 RPL19P84098 196 aaKnown RBP5.36□□□□□ -1.55
SPG11-205ENST00000558080 GOLT1AQ6ZVE7 132 aa5.36□□□□□ -1.55
SPG11-205ENST00000558080 FAM231DQ6ZW35 169 aa5.36□□□□□ -1.55
SPG11-205ENST00000558080 Q86TA4 180 aa5.36□□□□□ -1.55
SPG11-205ENST00000558080 OR8A1Q8NGG7 326 aa5.36□□□□□ -1.55
SPG11-205ENST00000558080 LINC00479Q96M42 142 aa5.36□□□□□ -1.55
SPG11-205ENST00000558080 PYGO2Q9BRQ0 406 aa5.36□□□□□ -1.55
SPG11-205ENST00000558080 IL36BQ9NZH7 164 aa5.36□□□□□ -1.55
SPG11-205ENST00000558080 DNAH6Q9C0G6 4158 aa5.35□□□□□ -1.55
SPG11-205ENST00000558080 TEX48A0A1B0GUV7 120 aa5.35□□□□□ -1.55
SPG11-205ENST00000558080 DIRC3C9JPN6 131 aa5.35□□□□□ -1.55
SPG11-205ENST00000558080 INSP01308 110 aa5.35□□□□□ -1.55
SPG11-205ENST00000558080 TYMSP04818 313 aa5.35□□□□□ -1.55
SPG11-205ENST00000558080 AZU1P20160 251 aa5.35□□□□□ -1.55
SPG11-205ENST00000558080 DAD1P61803 113 aa5.35□□□□□ -1.55
SPG11-205ENST00000558080 OR5I1Q13606 314 aa5.35□□□□□ -1.55
SPG11-205ENST00000558080 IBA57Q5T440 356 aaKnown RBP5.35□□□□□ -1.55
SPG11-205ENST00000558080 MRPL53Q96EL3 112 aaKnown RBP5.35□□□□□ -1.55
SPG11-205ENST00000558080 ZNF331Q9NQX6 463 aaPredicted RBP5.35□□□□□ -1.55
SPG11-205ENST00000558080 ZNF492Q9P255 531 aa5.35□□□□□ -1.55
SPG11-205ENST00000558080 ZFP30Q9Y2G7 519 aa5.35□□□□□ -1.55
SPG11-205ENST00000558080 V9GYV3 84 aa5.35□□□□□ -1.55
SPG11-205ENST00000558080 A0A1W2PPQ1 181 aa5.34□□□□□ -1.55
SPG11-205ENST00000558080 M0R2N4 97 aa5.34□□□□□ -1.55
SPG11-205ENST00000558080 GATCO43716 136 aaKnown RBP5.34□□□□□ -1.55
SPG11-205ENST00000558080 P0DMU3 169 aa5.34□□□□□ -1.55
SPG11-205ENST00000558080 FAM231AP0DMU4 169 aa5.34□□□□□ -1.55
SPG11-205ENST00000558080 FAM231CP0DMU5 169 aa5.34□□□□□ -1.55
SPG11-205ENST00000558080 HTN1P15515 57 aa5.34□□□□□ -1.55
SPG11-205ENST00000558080 FAM3BP58499 235 aaPredicted RBP5.34□□□□□ -1.55
SPG11-205ENST00000558080 RNF151Q2KHN1 245 aa5.34□□□□□ -1.55
SPG11-205ENST00000558080 PRNTQ86SH4 94 aa5.34□□□□□ -1.55
SPG11-205ENST00000558080 UBE2DNLQ8IWF7 75 aa5.34□□□□□ -1.55
SPG11-205ENST00000558080 TMEM183AQ8IXX5 376 aa5.34□□□□□ -1.55
SPG11-205ENST00000558080 POM121L12Q8N7R1 296 aa5.34□□□□□ -1.55
SPG11-205ENST00000558080 NHLRC2Q8NBF2 726 aa5.34□□□□□ -1.55
SPG11-205ENST00000558080 LINC01587Q99440 93 aa5.34□□□□□ -1.55
SPG11-205ENST00000558080 MLST8Q9BVC4 326 aa5.34□□□□□ -1.55
SPG11-205ENST00000558080 RNASE7Q9H1E1 156 aaKnown RBP5.34□□□□□ -1.55
SPG11-205ENST00000558080 PSG8Q9UQ74 426 aa5.34□□□□□ -1.55
SPG11-205ENST00000558080 LOC105371267A0A1B0GV96 52 aa5.33□□□□□ -1.56
SPG11-205ENST00000558080 RBAKDNA6NC62 111 aa5.33□□□□□ -1.56
SPG11-205ENST00000558080 PRAC2D3DTV9 90 aa5.33□□□□□ -1.56
SPG11-205ENST00000558080 M0R3E3 92 aa5.33□□□□□ -1.56
SPG11-205ENST00000558080 IGLV2-11P01706 119 aa5.33□□□□□ -1.56
SPG11-205ENST00000558080 DEFB130BP0DP73 79 aa5.33□□□□□ -1.56
SPG11-205ENST00000558080 DEFB130AP0DP74 79 aa5.33□□□□□ -1.56
SPG11-205ENST00000558080 KRTAP15-1Q3LI76 137 aa5.33□□□□□ -1.56
SPG11-205ENST00000558080 CT83Q5H943 113 aa5.33□□□□□ -1.56
SPG11-205ENST00000558080 SAPCD1Q5SSQ6 148 aa5.33□□□□□ -1.56
SPG11-205ENST00000558080 PRR27Q6MZM9 219 aa5.33□□□□□ -1.56
SPG11-205ENST00000558080 OR10J6PQ8NGY7 276 aa5.33□□□□□ -1.56
SPG11-205ENST00000558080 DAZAP1Q96EP5 407 aaKnown RBP5.33□□□□□ -1.56
SPG11-205ENST00000558080 SGK494Q96LW2 274 aa5.33□□□□□ -1.56
SPG11-205ENST00000558080 NDFIP1Q9BT67 221 aa5.33□□□□□ -1.56
SPG11-205ENST00000558080 IGLV2-18A0A075B6J9 118 aa5.32□□□□□ -1.56
SPG11-205ENST00000558080 TRAV8-1A0A0A6YYK1 113 aa5.32□□□□□ -1.56
SPG11-205ENST00000558080 SMIM27A0A1W2PRY6 76 aa5.32□□□□□ -1.56
SPG11-205ENST00000558080 PLAC8L1A1L4L8 177 aa5.32□□□□□ -1.56
SPG11-205ENST00000558080 LYRM9A8MSI8 78 aa5.32□□□□□ -1.56
SPG11-205ENST00000558080 J3KRW8 73 aa5.32□□□□□ -1.56
SPG11-205ENST00000558080 P01737 135 aa5.32□□□□□ -1.56
SPG11-205ENST00000558080 S100A6P06703 90 aa5.32□□□□□ -1.56
SPG11-205ENST00000558080 CT45A10P0DMU9 189 aa5.32□□□□□ -1.56
SPG11-205ENST00000558080 CDKN1BP46527 198 aa5.32□□□□□ -1.56
SPG11-205ENST00000558080 COX19Q49B96 90 aa5.32□□□□□ -1.56
SPG11-205ENST00000558080 COX8CQ7Z4L0 72 aa5.32□□□□□ -1.56
SPG11-205ENST00000558080 ZFP82Q8N141 532 aa5.32□□□□□ -1.56
SPG11-205ENST00000558080 TMEM256Q8N2U0 113 aa5.32□□□□□ -1.56
SPG11-205ENST00000558080 RPP21Q9H633 154 aaKnown RBP5.32□□□□□ -1.56
SPG11-205ENST00000558080 IGKV2-40A0A087WW87 121 aaPredicted RBP5.31□□□□□ -1.56
SPG11-205ENST00000558080 C19orf71A6NCJ1 209 aa5.31□□□□□ -1.56
SPG11-205ENST00000558080 A8MWL6 223 aa5.31□□□□□ -1.56
SPG11-205ENST00000558080 F5H768 121 aa5.31□□□□□ -1.56
SPG11-205ENST00000558080 IGKV2D-40P01614 121 aaPredicted RBP5.31□□□□□ -1.56
SPG11-205ENST00000558080 TRGC2P03986 189 aa5.31□□□□□ -1.56
SPG11-205ENST00000558080 TSPOP30536 169 aa5.31□□□□□ -1.56
SPG11-205ENST00000558080 TSKUQ8WUA8 353 aa5.31□□□□□ -1.56
SPG11-205ENST00000558080 GFRA4Q9GZZ7 299 aa5.31□□□□□ -1.56
SPG11-205ENST00000558080 NOP10Q9NPE3 64 aaKnown RBP5.31□□□□□ -1.56
SPG11-205ENST00000558080 NAT8BQ9UHF3 227 aa5.31□□□□□ -1.56
SPG11-205ENST00000558080 FAM231BA6NCW3 169 aa5.3□□□□□ -1.56
SPG11-205ENST00000558080 MT-ND6P03923 174 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms