RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 PTH2Q96A98 100 aa17.96■□□□□ 0.47
SMAD6-202ENST00000557916 KMT2CQ8NEZ4 4911 aaKnown RBP17.95■□□□□ 0.46
SMAD6-202ENST00000557916 ZNF727A8MUV8 499 aa17.95■□□□□ 0.46
SMAD6-202ENST00000557916 K7EN84 100 aa17.94■□□□□ 0.46
SMAD6-202ENST00000557916 P01737 135 aa17.93■□□□□ 0.46
SMAD6-202ENST00000557916 CXCL1P09341 107 aa17.93■□□□□ 0.46
SMAD6-202ENST00000557916 SFTA3P0C7M3 94 aa17.93■□□□□ 0.46
SMAD6-202ENST00000557916 POM121L12Q8N7R1 296 aa17.93■□□□□ 0.46
SMAD6-202ENST00000557916 LY96Q9Y6Y9 160 aa17.93■□□□□ 0.46
SMAD6-202ENST00000557916 MUC4Q99102 2169 aa17.92■□□□□ 0.46
SMAD6-202ENST00000557916 TRAV4A0A0B4J268 109 aa17.92■□□□□ 0.46
SMAD6-202ENST00000557916 OR4C5Q8NGB2 326 aa17.92■□□□□ 0.46
SMAD6-202ENST00000557916 OR2D3Q8NGH3 330 aa17.92■□□□□ 0.46
SMAD6-202ENST00000557916 ZNF479Q96JC4 524 aa17.92■□□□□ 0.46
SMAD6-202ENST00000557916 PHLDA3Q9Y5J5 127 aa17.92■□□□□ 0.46
SMAD6-202ENST00000557916 TRAV26-1A0A087WT03 109 aa17.91■□□□□ 0.46
SMAD6-202ENST00000557916 NUDT10Q8NFP7 164 aa17.91■□□□□ 0.46
SMAD6-202ENST00000557916 NUDT11Q96G61 164 aa17.91■□□□□ 0.46
SMAD6-202ENST00000557916 SCRT2Q9NQ03 307 aa17.91■□□□□ 0.46
SMAD6-202ENST00000557916 MED14OSP0DP75 135 aa17.9■□□□□ 0.46
SMAD6-202ENST00000557916 RPS20P60866 119 aaKnown RBP17.9■□□□□ 0.46
SMAD6-202ENST00000557916 FHL2Q14192 279 aa17.9■□□□□ 0.46
SMAD6-202ENST00000557916 FAM74A3Q4VXF1 159 aa17.9■□□□□ 0.46
SMAD6-202ENST00000557916 LYSTQ99698 3801 aa17.9■□□□□ 0.46
SMAD6-202ENST00000557916 A0A0J9YY99 117 aa17.89■□□□□ 0.46
SMAD6-202ENST00000557916 LCE6AA0A183 80 aa17.89■□□□□ 0.46
SMAD6-202ENST00000557916 C15orf53Q8NAA6 179 aa17.89■□□□□ 0.46
SMAD6-202ENST00000557916 SYT8Q8NBV8 401 aa17.89■□□□□ 0.46
SMAD6-202ENST00000557916 RNASE7Q9H1E1 156 aaKnown RBP17.89■□□□□ 0.46
SMAD6-202ENST00000557916 TRGV4A0A0C4DH28 118 aa17.89■□□□□ 0.45
SMAD6-202ENST00000557916 RS1O15537 224 aa17.89■□□□□ 0.45
SMAD6-202ENST00000557916 PIK3CD-AS1Q5SR53 167 aa17.89■□□□□ 0.45
SMAD6-202ENST00000557916 DMRTA1Q5VZB9 504 aa17.89■□□□□ 0.45
SMAD6-202ENST00000557916 SLAQ13239 276 aa17.88■□□□□ 0.45
SMAD6-202ENST00000557916 CFAP126Q5VTH2 177 aa17.88■□□□□ 0.45
SMAD6-202ENST00000557916 LINC01551Q86U37 167 aa17.88■□□□□ 0.45
SMAD6-202ENST00000557916 LINC00476Q8WZB0 136 aa17.88■□□□□ 0.45
SMAD6-202ENST00000557916 XKRY2A2RUG3 117 aa17.87■□□□□ 0.45
SMAD6-202ENST00000557916 NUDT3O95989 172 aa17.87■□□□□ 0.45
SMAD6-202ENST00000557916 GZMBP10144 247 aa17.87■□□□□ 0.45
SMAD6-202ENST00000557916 TMEM241Q24JQ0 296 aa17.87■□□□□ 0.45
SMAD6-202ENST00000557916 ZFP82Q8N141 532 aa17.87■□□□□ 0.45
SMAD6-202ENST00000557916 SSBP4Q9BWG4 385 aaPredicted RBP17.87■□□□□ 0.45
SMAD6-202ENST00000557916 PRO0255Q9UI72 69 aa17.87■□□□□ 0.45
SMAD6-202ENST00000557916 HHLA3Q9XRX5 114 aa17.87■□□□□ 0.45
SMAD6-202ENST00000557916 M0R381 172 aa17.86■□□□□ 0.45
SMAD6-202ENST00000557916 SNAI2O43623 268 aa17.86■□□□□ 0.45
SMAD6-202ENST00000557916 OR5AL1P0C617 328 aa17.86■□□□□ 0.45
SMAD6-202ENST00000557916 SOHLH1Q5JUK2 328 aa17.86■□□□□ 0.45
SMAD6-202ENST00000557916 VSIG2Q96IQ7 327 aa17.86■□□□□ 0.45
SMAD6-202ENST00000557916 RPP21Q9H633 154 aaKnown RBP17.86■□□□□ 0.45
SMAD6-202ENST00000557916 ALMS1Q8TCU4 4167 aa17.86■□□□□ 0.45
SMAD6-202ENST00000557916 A8MWV9 139 aa17.85■□□□□ 0.45
SMAD6-202ENST00000557916 H3BNG1 76 aa17.85■□□□□ 0.45
SMAD6-202ENST00000557916 LY6G6CO95867 125 aa17.85■□□□□ 0.45
SMAD6-202ENST00000557916 LGALS9CQ6DKI2 356 aa17.85■□□□□ 0.45
SMAD6-202ENST00000557916 FAM231DQ6ZW35 169 aa17.85■□□□□ 0.45
SMAD6-202ENST00000557916 PAX4O43316 350 aa17.84■□□□□ 0.45
SMAD6-202ENST00000557916 CIDEAO60543 219 aa17.84■□□□□ 0.45
SMAD6-202ENST00000557916 CRYBA4P53673 196 aa17.84■□□□□ 0.45
SMAD6-202ENST00000557916 ERVFC1-1P60608 527 aa17.84■□□□□ 0.45
SMAD6-202ENST00000557916 OR10AG1Q8NH19 301 aa17.84■□□□□ 0.45
SMAD6-202ENST00000557916 JPT2Q9H910 190 aa17.84■□□□□ 0.45
SMAD6-202ENST00000557916 IGLC6P0CF74 106 aa17.83■□□□□ 0.45
SMAD6-202ENST00000557916 FER1L6-AS1Q8NA97 138 aa17.83■□□□□ 0.45
SMAD6-202ENST00000557916 NAT8Q9UHE5 227 aa17.83■□□□□ 0.45
SMAD6-202ENST00000557916 IGHV3-73A0A0B4J1V6 119 aa17.82■□□□□ 0.44
SMAD6-202ENST00000557916 MUC21A0A0G2JKD1 596 aa17.82■□□□□ 0.44
SMAD6-202ENST00000557916 MUC21A0A140T8X8 626 aa17.82■□□□□ 0.44
SMAD6-202ENST00000557916 GATCO43716 136 aaKnown RBP17.82■□□□□ 0.44
SMAD6-202ENST00000557916 TPPP3Q9BW30 176 aa17.82■□□□□ 0.44
SMAD6-202ENST00000557916 SACSQ9NZJ4 4579 aa17.82■□□□□ 0.44
SMAD6-202ENST00000557916 P0DMU3 169 aa17.81■□□□□ 0.44
SMAD6-202ENST00000557916 FAM231AP0DMU4 169 aa17.81■□□□□ 0.44
SMAD6-202ENST00000557916 FAM231CP0DMU5 169 aa17.81■□□□□ 0.44
SMAD6-202ENST00000557916 SPANXN1Q5VSR9 72 aa17.81■□□□□ 0.44
SMAD6-202ENST00000557916 SFRP2Q96HF1 295 aa17.81■□□□□ 0.44
SMAD6-202ENST00000557916 DNAH1Q9P2D7 4330 aa17.81■□□□□ 0.44
SMAD6-202ENST00000557916 NXPH4O95158 308 aa17.81■□□□□ 0.44
SMAD6-202ENST00000557916 GATA1P15976 413 aaPredicted RBP17.81■□□□□ 0.44
SMAD6-202ENST00000557916 RPL23P62829 140 aaKnown RBP17.81■□□□□ 0.44
SMAD6-202ENST00000557916 SSTP61278 116 aa17.8■□□□□ 0.44
SMAD6-202ENST00000557916 ADIRFQ15847 76 aa17.8■□□□□ 0.44
SMAD6-202ENST00000557916 ZFP2Q6ZN57 461 aa17.8■□□□□ 0.44
SMAD6-202ENST00000557916 SAMD10Q9BYL1 202 aa17.8■□□□□ 0.44
SMAD6-202ENST00000557916 NACAE9PAV3 2078 aa17.79■□□□□ 0.44
SMAD6-202ENST00000557916 A0A1W2PPQ1 181 aa17.79■□□□□ 0.44
SMAD6-202ENST00000557916 ISOC2Q96AB3 205 aa17.79■□□□□ 0.44
SMAD6-202ENST00000557916 OSTCQ9NRP0 149 aa17.79■□□□□ 0.44
SMAD6-202ENST00000557916 A0A096LPF7 62 aa17.77■□□□□ 0.44
SMAD6-202ENST00000557916 F2Z2F3 143 aa17.77■□□□□ 0.44
SMAD6-202ENST00000557916 FAM74A4Q5TZK3 123 aa17.77■□□□□ 0.44
SMAD6-202ENST00000557916 UFSP1Q6NVU6 142 aa17.77■□□□□ 0.44
SMAD6-202ENST00000557916 LYZL1Q6UWQ5 148 aa17.77■□□□□ 0.44
SMAD6-202ENST00000557916 ICOSQ9Y6W8 199 aa17.77■□□□□ 0.44
SMAD6-202ENST00000557916 A0A087WWL8 130 aa17.76■□□□□ 0.43
SMAD6-202ENST00000557916 A8MWL6 223 aa17.76■□□□□ 0.43
SMAD6-202ENST00000557916 RHODO00212 210 aa17.76■□□□□ 0.43
SMAD6-202ENST00000557916 CT83Q5H943 113 aa17.76■□□□□ 0.43
SMAD6-202ENST00000557916 C15orf54Q8N8G6 183 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 202.5 ms