RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 SRP19P09132 144 aaKnown RBP10.05□□□□□ -0.8
USP3-205ENST00000557884 ARMS2P0C7Q2 107 aa10.05□□□□□ -0.8
USP3-205ENST00000557884 POM121L12Q8N7R1 296 aa10.05□□□□□ -0.8
USP3-205ENST00000557884 DAZAP1Q96EP5 407 aaKnown RBP10.05□□□□□ -0.8
USP3-205ENST00000557884 SMIM12Q96EX1 92 aa10.05□□□□□ -0.8
USP3-205ENST00000557884 ZNF479Q96JC4 524 aa10.05□□□□□ -0.8
USP3-205ENST00000557884 TRAV4A0A0B4J268 109 aa10.04□□□□□ -0.8
USP3-205ENST00000557884 C9JQL5 133 aa10.04□□□□□ -0.8
USP3-205ENST00000557884 SRSF3P84103 164 aaKnown RBP10.04□□□□□ -0.8
USP3-205ENST00000557884 OR4C5Q8NGB2 326 aa10.04□□□□□ -0.8
USP3-205ENST00000557884 OCC1Q8TAD7 63 aa10.04□□□□□ -0.8
USP3-205ENST00000557884 IL36BQ9NZH7 164 aa10.04□□□□□ -0.8
USP3-205ENST00000557884 KMT2AQ03164 3969 aa10.04□□□□□ -0.8
USP3-205ENST00000557884 TRGV4A0A0C4DH28 118 aa10.03□□□□□ -0.8
USP3-205ENST00000557884 K7EN84 100 aa10.03□□□□□ -0.8
USP3-205ENST00000557884 RAB14P61106 215 aa10.03□□□□□ -0.8
USP3-205ENST00000557884 IFITM2Q01629 132 aa10.03□□□□□ -0.8
USP3-205ENST00000557884 FHL2Q14192 279 aa10.03□□□□□ -0.8
USP3-205ENST00000557884 DNLZQ5SXM8 178 aa10.03□□□□□ -0.8
USP3-205ENST00000557884 C15orf53Q8NAA6 179 aa10.03□□□□□ -0.8
USP3-205ENST00000557884 OR2D3Q8NGH3 330 aa10.03□□□□□ -0.8
USP3-205ENST00000557884 SMIM7Q9BQ49 75 aa10.03□□□□□ -0.8
USP3-205ENST00000557884 C19orf71A6NCJ1 209 aa10.02□□□□□ -0.81
USP3-205ENST00000557884 P01737 135 aa10.02□□□□□ -0.81
USP3-205ENST00000557884 GZMBP10144 247 aa10.02□□□□□ -0.81
USP3-205ENST00000557884 PEA15Q15121 130 aa10.02□□□□□ -0.81
USP3-205ENST00000557884 CFAP126Q5VTH2 177 aa10.02□□□□□ -0.81
USP3-205ENST00000557884 LGALS9CQ6DKI2 356 aa10.02□□□□□ -0.81
USP3-205ENST00000557884 BIN3Q9NQY0 253 aa10.02□□□□□ -0.81
USP3-205ENST00000557884 PHLDA3Q9Y5J5 127 aa10.02□□□□□ -0.81
USP3-205ENST00000557884 DNAH6Q9C0G6 4158 aa10.02□□□□□ -0.81
USP3-205ENST00000557884 HYDINQ4G0P3 5121 aa10.01□□□□□ -0.81
USP3-205ENST00000557884 IGHV3-73A0A0B4J1V6 119 aa10.01□□□□□ -0.81
USP3-205ENST00000557884 MUC21A0A0G2JKD1 596 aa10.01□□□□□ -0.81
USP3-205ENST00000557884 MUC21A0A140T8X8 626 aa10.01□□□□□ -0.81
USP3-205ENST00000557884 ZNF727A8MUV8 499 aa10.01□□□□□ -0.81
USP3-205ENST00000557884 M0R381 172 aa10.01□□□□□ -0.81
USP3-205ENST00000557884 RS1O15537 224 aa10.01□□□□□ -0.81
USP3-205ENST00000557884 PAX4O43316 350 aa10.01□□□□□ -0.81
USP3-205ENST00000557884 NDUFS6O75380 124 aaKnown RBP10.01□□□□□ -0.81
USP3-205ENST00000557884 DMRTA1Q5VZB9 504 aa10.01□□□□□ -0.81
USP3-205ENST00000557884 PTH2Q96A98 100 aa10.01□□□□□ -0.81
USP3-205ENST00000557884 VSIG2Q96IQ7 327 aa10.01□□□□□ -0.81
USP3-205ENST00000557884 RNASE7Q9H1E1 156 aaKnown RBP10.01□□□□□ -0.81
USP3-205ENST00000557884 JPT2Q9H910 190 aa10.01□□□□□ -0.81
USP3-205ENST00000557884 SCRT2Q9NQ03 307 aa10.01□□□□□ -0.81
USP3-205ENST00000557884 HHLA3Q9XRX5 114 aa10.01□□□□□ -0.81
USP3-205ENST00000557884 CXCL1P09341 107 aa10□□□□□ -0.81
USP3-205ENST00000557884 CRYBA4P53673 196 aa10□□□□□ -0.81
USP3-205ENST00000557884 SSTP61278 116 aa10□□□□□ -0.81
USP3-205ENST00000557884 SYT8Q8NBV8 401 aa10□□□□□ -0.81
USP3-205ENST00000557884 NUDT10Q8NFP7 164 aa10□□□□□ -0.81
USP3-205ENST00000557884 NUDT11Q96G61 164 aa10□□□□□ -0.81
USP3-205ENST00000557884 TPPP3Q9BW30 176 aa10□□□□□ -0.81
USP3-205ENST00000557884 PRO0255Q9UI72 69 aa10□□□□□ -0.81
USP3-205ENST00000557884 P0DMU3 169 aa9.99□□□□□ -0.81
USP3-205ENST00000557884 FAM231AP0DMU4 169 aa9.99□□□□□ -0.81
USP3-205ENST00000557884 FAM231CP0DMU5 169 aa9.99□□□□□ -0.81
USP3-205ENST00000557884 SLAQ13239 276 aa9.99□□□□□ -0.81
USP3-205ENST00000557884 UBE2DNLQ8IWF7 75 aa9.99□□□□□ -0.81
USP3-205ENST00000557884 ZFP82Q8N141 532 aa9.99□□□□□ -0.81
USP3-205ENST00000557884 OR10AG1Q8NH19 301 aa9.99□□□□□ -0.81
USP3-205ENST00000557884 A8MWV9 139 aa9.98□□□□□ -0.81
USP3-205ENST00000557884 MED14OSP0DP75 135 aa9.98□□□□□ -0.81
USP3-205ENST00000557884 RPS20P60866 119 aaKnown RBP9.98□□□□□ -0.81
USP3-205ENST00000557884 CLLU1Q5K131 121 aa9.98□□□□□ -0.81
USP3-205ENST00000557884 SAMD10Q9BYL1 202 aa9.98□□□□□ -0.81
USP3-205ENST00000557884 RPP21Q9H633 154 aaKnown RBP9.98□□□□□ -0.81
USP3-205ENST00000557884 MUC4Q99102 2169 aa9.97□□□□□ -0.81
USP3-205ENST00000557884 A0A096LPF7 62 aa9.97□□□□□ -0.81
USP3-205ENST00000557884 XKRY2A2RUG3 117 aa9.97□□□□□ -0.81
USP3-205ENST00000557884 SNAI2O43623 268 aa9.97□□□□□ -0.81
USP3-205ENST00000557884 OR5AL1P0C617 328 aa9.97□□□□□ -0.81
USP3-205ENST00000557884 GATA1P15976 413 aaPredicted RBP9.97□□□□□ -0.81
USP3-205ENST00000557884 PIK3CD-AS1Q5SR53 167 aa9.97□□□□□ -0.81
USP3-205ENST00000557884 LINC01551Q86U37 167 aa9.97□□□□□ -0.81
USP3-205ENST00000557884 FER1L6-AS1Q8NA97 138 aa9.97□□□□□ -0.81
USP3-205ENST00000557884 SMDT1Q9H4I9 107 aa9.97□□□□□ -0.81
USP3-205ENST00000557884 LY96Q9Y6Y9 160 aa9.97□□□□□ -0.81
USP3-205ENST00000557884 A0A087WWL8 130 aa9.96□□□□□ -0.82
USP3-205ENST00000557884 LOC100131303A0A0U1RQF7 123 aa9.96□□□□□ -0.82
USP3-205ENST00000557884 H3BNG1 76 aa9.96□□□□□ -0.82
USP3-205ENST00000557884 GATCO43716 136 aaKnown RBP9.96□□□□□ -0.82
USP3-205ENST00000557884 IGLC6P0CF74 106 aa9.96□□□□□ -0.82
USP3-205ENST00000557884 GYPEP15421 78 aa9.96□□□□□ -0.82
USP3-205ENST00000557884 ERVFC1-1P60608 527 aa9.96□□□□□ -0.82
USP3-205ENST00000557884 FAM74A4Q5TZK3 123 aa9.96□□□□□ -0.82
USP3-205ENST00000557884 SPANXN1Q5VSR9 72 aa9.96□□□□□ -0.82
USP3-205ENST00000557884 Q6ZSN1 163 aa9.96□□□□□ -0.82
USP3-205ENST00000557884 SSBP4Q9BWG4 385 aaPredicted RBP9.96□□□□□ -0.82
USP3-205ENST00000557884 ICOSQ9Y6W8 199 aa9.96□□□□□ -0.82
USP3-205ENST00000557884 DNAH2Q9P225 4427 aa9.96□□□□□ -0.82
USP3-205ENST00000557884 NXPH4O95158 308 aa9.95□□□□□ -0.82
USP3-205ENST00000557884 TMEM241Q24JQ0 296 aa9.95□□□□□ -0.82
USP3-205ENST00000557884 FAM74A3Q4VXF1 159 aa9.95□□□□□ -0.82
USP3-205ENST00000557884 SOHLH1Q5JUK2 328 aa9.95□□□□□ -0.82
USP3-205ENST00000557884 SLC25A29Q8N8R3 303 aa9.95□□□□□ -0.82
USP3-205ENST00000557884 SFRP2Q96HF1 295 aa9.95□□□□□ -0.82
USP3-205ENST00000557884 DNAH10Q8IVF4 4471 aa9.95□□□□□ -0.82
USP3-205ENST00000557884 K7EQD1 137 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms