RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 STAG3L3P0CL85 134 aa10.57□□□□□ -0.72
SCFD1-224ENST00000557713 RNASE3P12724 160 aaKnown RBP10.57□□□□□ -0.72
SCFD1-224ENST00000557713 C5orf17Q8NAS9 161 aa10.57□□□□□ -0.72
SCFD1-224ENST00000557713 TM2D2Q9BX73 214 aa10.57□□□□□ -0.72
SCFD1-224ENST00000557713 Q6ZSA8 131 aa10.56□□□□□ -0.72
SCFD1-224ENST00000557713 Q8N3U1 123 aa10.56□□□□□ -0.72
SCFD1-224ENST00000557713 K7EQM0 130 aa10.55□□□□□ -0.72
SCFD1-224ENST00000557713 LINC00694P0DN24 101 aa10.55□□□□□ -0.72
SCFD1-224ENST00000557713 CDC34P49427 236 aaPredicted RBP10.55□□□□□ -0.72
SCFD1-224ENST00000557713 FLI1Q01543 452 aaPredicted RBP10.55□□□□□ -0.72
SCFD1-224ENST00000557713 SMUG1Q53HV7 270 aa10.55□□□□□ -0.72
SCFD1-224ENST00000557713 OR2G3Q8NGZ4 309 aa10.55□□□□□ -0.72
SCFD1-224ENST00000557713 RAB24Q969Q5 203 aa10.55□□□□□ -0.72
SCFD1-224ENST00000557713 EPDR1Q9UM22 224 aa10.55□□□□□ -0.72
SCFD1-224ENST00000557713 J3QL48 77 aa10.54□□□□□ -0.72
SCFD1-224ENST00000557713 GCHFRP30047 84 aa10.54□□□□□ -0.72
SCFD1-224ENST00000557713 SUMO1P63165 101 aaKnown RBP10.54□□□□□ -0.72
SCFD1-224ENST00000557713 ZFP2Q6ZN57 461 aa10.54□□□□□ -0.72
SCFD1-224ENST00000557713 PRNTQ86SH4 94 aa10.54□□□□□ -0.72
SCFD1-224ENST00000557713 PARLQ9H300 379 aa10.54□□□□□ -0.72
SCFD1-224ENST00000557713 TRAV8-3A0A0A6YYJ7 113 aa10.53□□□□□ -0.72
SCFD1-224ENST00000557713 GGTLC3B5MD39 225 aa10.53□□□□□ -0.72
SCFD1-224ENST00000557713 PLA2G1BP04054 148 aaKnown RBP10.53□□□□□ -0.72
SCFD1-224ENST00000557713 ZFP69Q49AA0 526 aa10.53□□□□□ -0.72
SCFD1-224ENST00000557713 PIK3CD-AS1Q5SR53 167 aa10.53□□□□□ -0.72
SCFD1-224ENST00000557713 DAZ4Q86SG3 579 aaKnown RBP10.53□□□□□ -0.72
SCFD1-224ENST00000557713 SH3BGRL3Q9H299 93 aa10.53□□□□□ -0.72
SCFD1-224ENST00000557713 DAZ3Q9NR90 486 aaKnown RBP10.53□□□□□ -0.72
SCFD1-224ENST00000557713 Q9UF83 564 aa10.53□□□□□ -0.72
SCFD1-224ENST00000557713 IGKV3D-20A0A0C4DH25 116 aa10.52□□□□□ -0.73
SCFD1-224ENST00000557713 GAGE12JA6NER3 117 aa10.52□□□□□ -0.73
SCFD1-224ENST00000557713 A8MWV9 139 aa10.52□□□□□ -0.73
SCFD1-224ENST00000557713 GAGE1Q13065 139 aa10.52□□□□□ -0.73
SCFD1-224ENST00000557713 GAGE4Q13068 117 aa10.52□□□□□ -0.73
SCFD1-224ENST00000557713 GAGE5Q13069 117 aa10.52□□□□□ -0.73
SCFD1-224ENST00000557713 GAGE13Q4V321 117 aa10.52□□□□□ -0.73
SCFD1-224ENST00000557713 SAPCD1Q5SSQ6 148 aa10.52□□□□□ -0.73
SCFD1-224ENST00000557713 UFSP1Q6NVU6 142 aa10.52□□□□□ -0.73
SCFD1-224ENST00000557713 CYB561D1Q8N8Q1 229 aa10.52□□□□□ -0.73
SCFD1-224ENST00000557713 HSD17B11Q8NBQ5 300 aa10.52□□□□□ -0.73
SCFD1-224ENST00000557713 LINC00479Q96M42 142 aa10.52□□□□□ -0.73
SCFD1-224ENST00000557713 PSMG3Q9BT73 122 aaPredicted RBP10.52□□□□□ -0.73
SCFD1-224ENST00000557713 KRTAP29-1A8MX34 341 aaPredicted RBP10.51□□□□□ -0.73
SCFD1-224ENST00000557713 LECT2O14960 151 aa10.51□□□□□ -0.73
SCFD1-224ENST00000557713 ATP6V0CP27449 155 aa10.51□□□□□ -0.73
SCFD1-224ENST00000557713 LINC00528Q8N1L1 170 aa10.51□□□□□ -0.73
SCFD1-224ENST00000557713 OR2T35Q8NGX2 323 aa10.51□□□□□ -0.73
SCFD1-224ENST00000557713 TMEM167BQ9NRX6 74 aa10.51□□□□□ -0.73
SCFD1-224ENST00000557713 CXorf1O96002 111 aa10.5□□□□□ -0.73
SCFD1-224ENST00000557713 SERF2P84101 59 aa10.5□□□□□ -0.73
SCFD1-224ENST00000557713 LGALSLQ3ZCW2 172 aaPredicted RBP10.5□□□□□ -0.73
SCFD1-224ENST00000557713 TOR2AQ5JU69 321 aa10.5□□□□□ -0.73
SCFD1-224ENST00000557713 SAMD10Q9BYL1 202 aa10.5□□□□□ -0.73
SCFD1-224ENST00000557713 JPT2Q9H910 190 aa10.5□□□□□ -0.73
SCFD1-224ENST00000557713 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.49□□□□□ -0.73
SCFD1-224ENST00000557713 A0A087WWC5 75 aa10.49□□□□□ -0.73
SCFD1-224ENST00000557713 FABP5P3A8MUU1 101 aa10.49□□□□□ -0.73
SCFD1-224ENST00000557713 MBP02144 154 aa10.49□□□□□ -0.73
SCFD1-224ENST00000557713 S100A4P26447 101 aaKnown RBP10.49□□□□□ -0.73
SCFD1-224ENST00000557713 DEFA1P59665 94 aa10.49□□□□□ -0.73
SCFD1-224ENST00000557713 DEFA3P59666 94 aa10.49□□□□□ -0.73
SCFD1-224ENST00000557713 C14orf178Q8N769 122 aaPredicted RBP10.49□□□□□ -0.73
SCFD1-224ENST00000557713 BAALCQ8WXS3 180 aa10.49□□□□□ -0.73
SCFD1-224ENST00000557713 COX11Q9Y6N1 276 aa10.49□□□□□ -0.73
SCFD1-224ENST00000557713 TRAV34A0A0B4J273 112 aa10.48□□□□□ -0.73
SCFD1-224ENST00000557713 A0A1W2PRE2 83 aa10.48□□□□□ -0.73
SCFD1-224ENST00000557713 FGF8P55075 233 aaPredicted RBP10.48□□□□□ -0.73
SCFD1-224ENST00000557713 DMRTA1Q5VZB9 504 aa10.48□□□□□ -0.73
SCFD1-224ENST00000557713 DEFB104AQ8WTQ1 72 aa10.48□□□□□ -0.73
SCFD1-224ENST00000557713 AQP10Q96PS8 301 aa10.48□□□□□ -0.73
SCFD1-224ENST00000557713 ACTR3CQ9C0K3 210 aaPredicted RBP10.48□□□□□ -0.73
SCFD1-224ENST00000557713 IL36BQ9NZH7 164 aa10.48□□□□□ -0.73
SCFD1-224ENST00000557713 TNFSF18Q9UNG2 199 aa10.48□□□□□ -0.73
SCFD1-224ENST00000557713 RNF222A6NCQ9 220 aa10.47□□□□□ -0.73
SCFD1-224ENST00000557713 A6NHS1 94 aa10.47□□□□□ -0.73
SCFD1-224ENST00000557713 ASIPP42127 132 aa10.47□□□□□ -0.73
SCFD1-224ENST00000557713 LINC01620Q4KN68 170 aa10.47□□□□□ -0.73
SCFD1-224ENST00000557713 DNLZQ5SXM8 178 aa10.47□□□□□ -0.73
SCFD1-224ENST00000557713 DNAJC30Q96LL9 226 aa10.47□□□□□ -0.73
SCFD1-224ENST00000557713 ARL2-SNX15V9GYD0 113 aa10.47□□□□□ -0.73
SCFD1-224ENST00000557713 CRIP1P50238 77 aa10.46□□□□□ -0.73
SCFD1-224ENST00000557713 SCXQ7RTU7 201 aa10.46□□□□□ -0.73
SCFD1-224ENST00000557713 NIT1Q86X76 327 aa10.46□□□□□ -0.73
SCFD1-224ENST00000557713 Q8N976 141 aa10.46□□□□□ -0.73
SCFD1-224ENST00000557713 ALG5Q9Y673 324 aa10.46□□□□□ -0.73
SCFD1-224ENST00000557713 B4DEV8 164 aa10.45□□□□□ -0.74
SCFD1-224ENST00000557713 KRBOX1C9JBD0 128 aa10.45□□□□□ -0.74
SCFD1-224ENST00000557713 KRTAP10-4P60372 401 aaPredicted RBP10.45□□□□□ -0.74
SCFD1-224ENST00000557713 RMI2Q96E14 147 aa10.45□□□□□ -0.74
SCFD1-224ENST00000557713 LRP1Q07954 4544 aaKnown RBP10.44□□□□□ -0.74
SCFD1-224ENST00000557713 RBFOX3A6NFN3 312 aa10.44□□□□□ -0.74
SCFD1-224ENST00000557713 H3BVH4 76 aa10.44□□□□□ -0.74
SCFD1-224ENST00000557713 RHODO00212 210 aa10.44□□□□□ -0.74
SCFD1-224ENST00000557713 ARMS2P0C7Q2 107 aa10.44□□□□□ -0.74
SCFD1-224ENST00000557713 ZNF726P1Q15940 193 aa10.44□□□□□ -0.74
SCFD1-224ENST00000557713 URGCP-MRPS24S4R325 110 aa10.44□□□□□ -0.74
SCFD1-224ENST00000557713 IGKV2D-24A0A075B6R9 120 aa10.43□□□□□ -0.74
SCFD1-224ENST00000557713 IFNA7P01567 189 aa10.43□□□□□ -0.74
SCFD1-224ENST00000557713 SEC11BP0C7V7 166 aa10.43□□□□□ -0.74
SCFD1-224ENST00000557713 Q5BKY6 102 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms