RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 OR4C5Q8NGB2 326 aa5.86□□□□□ -1.47
PSEN1-223ENST00000557511 PCNPQ8WW12 178 aaKnown RBP5.86□□□□□ -1.47
PSEN1-223ENST00000557511 PRO0255Q9UI72 69 aa5.86□□□□□ -1.47
PSEN1-223ENST00000557511 C9JCJ5 164 aa5.85□□□□□ -1.47
PSEN1-223ENST00000557511 CIDEAO60543 219 aa5.85□□□□□ -1.47
PSEN1-223ENST00000557511 LTAP01374 205 aa5.85□□□□□ -1.47
PSEN1-223ENST00000557511 ZNF80P51504 273 aaPredicted RBP5.85□□□□□ -1.47
PSEN1-223ENST00000557511 MEF2BQ02080 365 aaPredicted RBP5.85□□□□□ -1.47
PSEN1-223ENST00000557511 ZNF876PQ49A33 203 aa5.85□□□□□ -1.47
PSEN1-223ENST00000557511 ALKAL2Q6UX46 152 aa5.85□□□□□ -1.47
PSEN1-223ENST00000557511 RASL10AQ92737 203 aa5.85□□□□□ -1.47
PSEN1-223ENST00000557511 DAZAP1Q96EP5 407 aaKnown RBP5.85□□□□□ -1.47
PSEN1-223ENST00000557511 BIN3Q9NQY0 253 aa5.85□□□□□ -1.47
PSEN1-223ENST00000557511 VAX2Q9UIW0 290 aa5.85□□□□□ -1.47
PSEN1-223ENST00000557511 ICOSQ9Y6W8 199 aa5.85□□□□□ -1.47
PSEN1-223ENST00000557511 TENM2Q9NT68 2774 aa5.85□□□□□ -1.47
PSEN1-223ENST00000557511 TRAV4A0A0B4J268 109 aa5.84□□□□□ -1.47
PSEN1-223ENST00000557511 M0R036 132 aa5.84□□□□□ -1.47
PSEN1-223ENST00000557511 SH2D1AO60880 128 aa5.84□□□□□ -1.47
PSEN1-223ENST00000557511 BCL2P10415 239 aa5.84□□□□□ -1.47
PSEN1-223ENST00000557511 NKX2-5P52952 324 aaPredicted RBP5.84□□□□□ -1.47
PSEN1-223ENST00000557511 CCL20P78556 96 aa5.84□□□□□ -1.47
PSEN1-223ENST00000557511 ZC2HC1AQ96GY0 325 aa5.84□□□□□ -1.47
PSEN1-223ENST00000557511 MED9Q9NWA0 146 aa5.84□□□□□ -1.47
PSEN1-223ENST00000557511 HHLA3Q9XRX5 114 aa5.84□□□□□ -1.47
PSEN1-223ENST00000557511 CSMD3Q7Z407 3707 aa5.84□□□□□ -1.48
PSEN1-223ENST00000557511 DYNC2H1Q8NCM8 4307 aaKnown RBP5.83□□□□□ -1.48
PSEN1-223ENST00000557511 MGST1P10620 155 aaKnown RBP5.83□□□□□ -1.48
PSEN1-223ENST00000557511 RPL35P42766 123 aaKnown RBP5.83□□□□□ -1.48
PSEN1-223ENST00000557511 GNG4P50150 75 aa5.83□□□□□ -1.48
PSEN1-223ENST00000557511 MRPL23Q16540 153 aaKnown RBP5.83□□□□□ -1.48
PSEN1-223ENST00000557511 SOHLH1Q5JUK2 328 aa5.83□□□□□ -1.48
PSEN1-223ENST00000557511 PRR27Q6MZM9 219 aa5.83□□□□□ -1.48
PSEN1-223ENST00000557511 COX8CQ7Z4L0 72 aa5.83□□□□□ -1.48
PSEN1-223ENST00000557511 NHLRC2Q8NBF2 726 aa5.83□□□□□ -1.48
PSEN1-223ENST00000557511 C11orf52Q96A22 123 aa5.83□□□□□ -1.48
PSEN1-223ENST00000557511 PHLDA3Q9Y5J5 127 aa5.83□□□□□ -1.48
PSEN1-223ENST00000557511 SACSQ9NZJ4 4579 aa5.82□□□□□ -1.48
PSEN1-223ENST00000557511 TMSB15BA0A087X1C1 80 aa5.82□□□□□ -1.48
PSEN1-223ENST00000557511 XKRY2A2RUG3 117 aa5.82□□□□□ -1.48
PSEN1-223ENST00000557511 GRIFINA4D1Z8 144 aa5.82□□□□□ -1.48
PSEN1-223ENST00000557511 A8MWV9 139 aa5.82□□□□□ -1.48
PSEN1-223ENST00000557511 SFTA3P0C7M3 94 aa5.82□□□□□ -1.48
PSEN1-223ENST00000557511 SRIP30626 198 aa5.82□□□□□ -1.48
PSEN1-223ENST00000557511 ZNF674Q2M3X9 581 aa5.82□□□□□ -1.48
PSEN1-223ENST00000557511 LCE4AQ5TA78 99 aa5.82□□□□□ -1.48
PSEN1-223ENST00000557511 SH2D6Q7Z4S9 175 aa5.82□□□□□ -1.48
PSEN1-223ENST00000557511 PTH2Q96A98 100 aa5.82□□□□□ -1.48
PSEN1-223ENST00000557511 SMIM12Q96EX1 92 aa5.82□□□□□ -1.48
PSEN1-223ENST00000557511 ZNF479Q96JC4 524 aa5.82□□□□□ -1.48
PSEN1-223ENST00000557511 PRADC1Q9BSG0 188 aa5.82□□□□□ -1.48
PSEN1-223ENST00000557511 IL36BQ9NZH7 164 aa5.82□□□□□ -1.48
PSEN1-223ENST00000557511 C11orf21Q9P2W6 132 aa5.82□□□□□ -1.48
PSEN1-223ENST00000557511 ALMS1Q8TCU4 4167 aa5.81□□□□□ -1.48
PSEN1-223ENST00000557511 IGLV2-18A0A075B6J9 118 aa5.81□□□□□ -1.48
PSEN1-223ENST00000557511 IGKV3D-20A0A0C4DH25 116 aa5.81□□□□□ -1.48
PSEN1-223ENST00000557511 RBFOX3A6NFN3 312 aa5.81□□□□□ -1.48
PSEN1-223ENST00000557511 KRBOX1C9JBD0 128 aa5.81□□□□□ -1.48
PSEN1-223ENST00000557511 H3BVH4 76 aa5.81□□□□□ -1.48
PSEN1-223ENST00000557511 ARMS2P0C7Q2 107 aa5.81□□□□□ -1.48
PSEN1-223ENST00000557511 CRYBA4P53673 196 aa5.81□□□□□ -1.48
PSEN1-223ENST00000557511 RPS20P60866 119 aaKnown RBP5.81□□□□□ -1.48
PSEN1-223ENST00000557511 FHL2Q14192 279 aa5.81□□□□□ -1.48
PSEN1-223ENST00000557511 RHOHQ15669 191 aa5.81□□□□□ -1.48
PSEN1-223ENST00000557511 CENPWQ5EE01 88 aa5.81□□□□□ -1.48
PSEN1-223ENST00000557511 PIK3CD-AS1Q5SR53 167 aa5.81□□□□□ -1.48
PSEN1-223ENST00000557511 ZFP82Q8N141 532 aa5.81□□□□□ -1.48
PSEN1-223ENST00000557511 C9orf85Q96MD7 179 aa5.81□□□□□ -1.48
PSEN1-223ENST00000557511 EIF5A2Q9GZV4 153 aaKnown RBP5.81□□□□□ -1.48
PSEN1-223ENST00000557511 PGPEP1LA6NFU8 196 aa5.8□□□□□ -1.48
PSEN1-223ENST00000557511 M0R2N4 97 aa5.8□□□□□ -1.48
PSEN1-223ENST00000557511 M0R381 172 aa5.8□□□□□ -1.48
PSEN1-223ENST00000557511 RHODO00212 210 aa5.8□□□□□ -1.48
PSEN1-223ENST00000557511 RS1O15537 224 aa5.8□□□□□ -1.48
PSEN1-223ENST00000557511 CXCL1P09341 107 aa5.8□□□□□ -1.48
PSEN1-223ENST00000557511 RNASE3P12724 160 aaKnown RBP5.8□□□□□ -1.48
PSEN1-223ENST00000557511 GYPEP15421 78 aa5.8□□□□□ -1.48
PSEN1-223ENST00000557511 CRIP1P50238 77 aa5.8□□□□□ -1.48
PSEN1-223ENST00000557511 CEBPGP53567 150 aa5.8□□□□□ -1.48
PSEN1-223ENST00000557511 TTC32Q5I0X7 151 aa5.8□□□□□ -1.48
PSEN1-223ENST00000557511 ZNF506Q5JVG8 444 aa5.8□□□□□ -1.48
PSEN1-223ENST00000557511 DNLZQ5SXM8 178 aa5.8□□□□□ -1.48
PSEN1-223ENST00000557511 LCE1DQ5T752 114 aa5.8□□□□□ -1.48
PSEN1-223ENST00000557511 SPANXN1Q5VSR9 72 aa5.8□□□□□ -1.48
PSEN1-223ENST00000557511 NEGR1Q7Z3B1 354 aa5.8□□□□□ -1.48
PSEN1-223ENST00000557511 VSIG2Q96IQ7 327 aa5.8□□□□□ -1.48
PSEN1-223ENST00000557511 A0A096LPF7 62 aa5.79□□□□□ -1.48
PSEN1-223ENST00000557511 IGHV3-73A0A0B4J1V6 119 aa5.79□□□□□ -1.48
PSEN1-223ENST00000557511 TRBV6-4A0A1B0GX49 114 aa5.79□□□□□ -1.48
PSEN1-223ENST00000557511 RAB19A4D1S5 217 aa5.79□□□□□ -1.48
PSEN1-223ENST00000557511 C9orf118A6NHY6 69 aa5.79□□□□□ -1.48
PSEN1-223ENST00000557511 TMEM250H0YL14 139 aa5.79□□□□□ -1.48
PSEN1-223ENST00000557511 P01737 135 aa5.79□□□□□ -1.48
PSEN1-223ENST00000557511 C21orf62-AS1Q17RA5 79 aa5.79□□□□□ -1.48
PSEN1-223ENST00000557511 TOR2AQ5JU69 321 aa5.79□□□□□ -1.48
PSEN1-223ENST00000557511 CFAP126Q5VTH2 177 aa5.79□□□□□ -1.48
PSEN1-223ENST00000557511 ZFP2Q6ZN57 461 aa5.79□□□□□ -1.48
PSEN1-223ENST00000557511 DERL1Q9BUN8 251 aa5.79□□□□□ -1.48
PSEN1-223ENST00000557511 MLST8Q9BVC4 326 aa5.79□□□□□ -1.48
PSEN1-223ENST00000557511 Q9H8V8 135 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms