RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 RNF212Q495C1 297 aa4.42□□□□□ -1.7
FOXN3-215ENST00000557261 TCTEX1D4Q5JR98 221 aa4.42□□□□□ -1.7
FOXN3-215ENST00000557261 C10orf99Q6UWK7 81 aa4.42□□□□□ -1.7
FOXN3-215ENST00000557261 KIR2DL5AQ8N109 375 aa4.42□□□□□ -1.7
FOXN3-215ENST00000557261 KIR2DL5BQ8NHK3 375 aa4.42□□□□□ -1.7
FOXN3-215ENST00000557261 C9orf85Q96MD7 179 aa4.42□□□□□ -1.7
FOXN3-215ENST00000557261 ANK2Q01484 3957 aa4.42□□□□□ -1.7
FOXN3-215ENST00000557261 IGHV3-16A0A0C4DH30 117 aa4.41□□□□□ -1.7
FOXN3-215ENST00000557261 IGHV3-35A0A0C4DH35 117 aa4.41□□□□□ -1.7
FOXN3-215ENST00000557261 A0A1B0GWB2 263 aa4.41□□□□□ -1.7
FOXN3-215ENST00000557261 K7EN84 100 aa4.41□□□□□ -1.7
FOXN3-215ENST00000557261 SCO1O75880 301 aa4.41□□□□□ -1.7
FOXN3-215ENST00000557261 S100PP25815 95 aa4.41□□□□□ -1.7
FOXN3-215ENST00000557261 RPL19P84098 196 aaKnown RBP4.41□□□□□ -1.7
FOXN3-215ENST00000557261 SAPCD1Q5SSQ6 148 aa4.41□□□□□ -1.7
FOXN3-215ENST00000557261 BAGE2Q86Y30 109 aa4.41□□□□□ -1.7
FOXN3-215ENST00000557261 CBLN2Q8IUK8 224 aa4.41□□□□□ -1.7
FOXN3-215ENST00000557261 EXOC3-AS1Q8N2X6 119 aa4.41□□□□□ -1.7
FOXN3-215ENST00000557261 KLHL30-AS1Q8NEE0 82 aa4.41□□□□□ -1.7
FOXN3-215ENST00000557261 OR4B1Q8NGF8 309 aa4.41□□□□□ -1.7
FOXN3-215ENST00000557261 DCANP1Q8TF63 244 aa4.41□□□□□ -1.7
FOXN3-215ENST00000557261 ODF3Q96PU9 254 aa4.41□□□□□ -1.7
FOXN3-215ENST00000557261 OR5B12Q96R08 314 aa4.41□□□□□ -1.7
FOXN3-215ENST00000557261 PYGO2Q9BRQ0 406 aa4.41□□□□□ -1.7
FOXN3-215ENST00000557261 RHPN1-AS1Q9BWJ2 59 aa4.41□□□□□ -1.7
FOXN3-215ENST00000557261 SAV1Q9H4B6 383 aaPredicted RBP4.41□□□□□ -1.7
FOXN3-215ENST00000557261 TRAV8-2A0A0B4J237 113 aa4.4□□□□□ -1.71
FOXN3-215ENST00000557261 C19orf71A6NCJ1 209 aa4.4□□□□□ -1.71
FOXN3-215ENST00000557261 C2orf70A6NJV1 201 aa4.4□□□□□ -1.71
FOXN3-215ENST00000557261 COLCA2A8K830 154 aa4.4□□□□□ -1.71
FOXN3-215ENST00000557261 OVOL1O14753 267 aa4.4□□□□□ -1.71
FOXN3-215ENST00000557261 TYMSP04818 313 aa4.4□□□□□ -1.71
FOXN3-215ENST00000557261 PFN1P07737 140 aaKnown RBP4.4□□□□□ -1.71
FOXN3-215ENST00000557261 GATA1P15976 413 aaPredicted RBP4.4□□□□□ -1.71
FOXN3-215ENST00000557261 CBLN1P23435 193 aa4.4□□□□□ -1.71
FOXN3-215ENST00000557261 GNG5P63218 68 aa4.4□□□□□ -1.71
FOXN3-215ENST00000557261 ELOBQ15370 118 aa4.4□□□□□ -1.71
FOXN3-215ENST00000557261 NSUN5P1Q3KNT7 163 aa4.4□□□□□ -1.71
FOXN3-215ENST00000557261 COX19Q49B96 90 aa4.4□□□□□ -1.71
FOXN3-215ENST00000557261 IBA57Q5T440 356 aaKnown RBP4.4□□□□□ -1.71
FOXN3-215ENST00000557261 C9orf66Q5T8R8 295 aa4.4□□□□□ -1.71
FOXN3-215ENST00000557261 LCN12Q6JVE5 192 aa4.4□□□□□ -1.71
FOXN3-215ENST00000557261 RASL11AQ6T310 242 aa4.4□□□□□ -1.71
FOXN3-215ENST00000557261 GOLT1AQ6ZVE7 132 aa4.4□□□□□ -1.71
FOXN3-215ENST00000557261 NDUFA11Q86Y39 141 aa4.4□□□□□ -1.71
FOXN3-215ENST00000557261 APRG1Q8IVJ8 170 aa4.4□□□□□ -1.71
FOXN3-215ENST00000557261 OR11H1Q8NG94 326 aa4.4□□□□□ -1.71
FOXN3-215ENST00000557261 OR1N2Q8NGR9 330 aa4.4□□□□□ -1.71
FOXN3-215ENST00000557261 OR2K2Q8NGT1 345 aa4.4□□□□□ -1.71
FOXN3-215ENST00000557261 LITAFQ99732 161 aa4.4□□□□□ -1.71
FOXN3-215ENST00000557261 NDFIP1Q9BT67 221 aa4.4□□□□□ -1.71
FOXN3-215ENST00000557261 GFRA4Q9GZZ7 299 aa4.4□□□□□ -1.71
FOXN3-215ENST00000557261 PSG8Q9UQ74 426 aa4.4□□□□□ -1.71
FOXN3-215ENST00000557261 V9GYV3 84 aa4.4□□□□□ -1.71
FOXN3-215ENST00000557261 IGHV3OR16-8A0A075B7F1 116 aa4.39□□□□□ -1.71
FOXN3-215ENST00000557261 M0R3E3 92 aa4.39□□□□□ -1.71
FOXN3-215ENST00000557261 CXCL1P09341 107 aa4.39□□□□□ -1.71
FOXN3-215ENST00000557261 CT45A10P0DMU9 189 aa4.39□□□□□ -1.71
FOXN3-215ENST00000557261 SYNJ2BPP57105 145 aa4.39□□□□□ -1.71
FOXN3-215ENST00000557261 SNRPD3P62318 126 aaKnown RBP4.39□□□□□ -1.71
FOXN3-215ENST00000557261 PAFAH1B2P68402 229 aa4.39□□□□□ -1.71
FOXN3-215ENST00000557261 Q6AWC8 147 aa4.39□□□□□ -1.71
FOXN3-215ENST00000557261 TCF24Q7RTU0 167 aa4.39□□□□□ -1.71
FOXN3-215ENST00000557261 ATP5L2Q7Z4Y8 100 aa4.39□□□□□ -1.71
FOXN3-215ENST00000557261 LINC00477Q96M19 166 aa4.39□□□□□ -1.71
FOXN3-215ENST00000557261 IL36BQ9NZH7 164 aa4.39□□□□□ -1.71
FOXN3-215ENST00000557261 DHRS4-AS1Q9P1J3 65 aa4.39□□□□□ -1.71
FOXN3-215ENST00000557261 TRAV8-1A0A0A6YYK1 113 aa4.38□□□□□ -1.71
FOXN3-215ENST00000557261 SMIM27A0A1W2PRY6 76 aa4.38□□□□□ -1.71
FOXN3-215ENST00000557261 A8MTW9 85 aa4.38□□□□□ -1.71
FOXN3-215ENST00000557261 ZNF207O43670 478 aaKnown RBP4.38□□□□□ -1.71
FOXN3-215ENST00000557261 P01737 135 aa4.38□□□□□ -1.71
FOXN3-215ENST00000557261 CD28P10747 220 aa4.38□□□□□ -1.71
FOXN3-215ENST00000557261 CRISP2P16562 243 aa4.38□□□□□ -1.71
FOXN3-215ENST00000557261 RAB5AP20339 215 aa4.38□□□□□ -1.71
FOXN3-215ENST00000557261 ZNF138P52744 262 aa4.38□□□□□ -1.71
FOXN3-215ENST00000557261 FOXA3P55318 350 aaPredicted RBP4.38□□□□□ -1.71
FOXN3-215ENST00000557261 TMEM78Q5T7P6 136 aa4.38□□□□□ -1.71
FOXN3-215ENST00000557261 TSKUQ8WUA8 353 aa4.38□□□□□ -1.71
FOXN3-215ENST00000557261 FAM19A4Q96LR4 140 aa4.38□□□□□ -1.71
FOXN3-215ENST00000557261 LINC00479Q96M42 142 aa4.38□□□□□ -1.71
FOXN3-215ENST00000557261 MS4A6AQ9H2W1 248 aa4.38□□□□□ -1.71
FOXN3-215ENST00000557261 RPP21Q9H633 154 aaKnown RBP4.38□□□□□ -1.71
FOXN3-215ENST00000557261 IGKV2-40A0A087WW87 121 aaPredicted RBP4.37□□□□□ -1.71
FOXN3-215ENST00000557261 IGHV3-66A0A0C4DH42 116 aa4.37□□□□□ -1.71
FOXN3-215ENST00000557261 A0A1B0GW15 77 aa4.37□□□□□ -1.71
FOXN3-215ENST00000557261 A8MWL6 223 aa4.37□□□□□ -1.71
FOXN3-215ENST00000557261 HSBP1L1C9JCN9 74 aa4.37□□□□□ -1.71
FOXN3-215ENST00000557261 GATCO43716 136 aaKnown RBP4.37□□□□□ -1.71
FOXN3-215ENST00000557261 IGKV2D-40P01614 121 aaPredicted RBP4.37□□□□□ -1.71
FOXN3-215ENST00000557261 MT-ND6P03923 174 aa4.37□□□□□ -1.71
FOXN3-215ENST00000557261 CFC1BP0CG36 223 aa4.37□□□□□ -1.71
FOXN3-215ENST00000557261 CFC1P0CG37 223 aa4.37□□□□□ -1.71
FOXN3-215ENST00000557261 MGST1P10620 155 aaKnown RBP4.37□□□□□ -1.71
FOXN3-215ENST00000557261 RPS20P60866 119 aaKnown RBP4.37□□□□□ -1.71
FOXN3-215ENST00000557261 RPL36AP83881 106 aaKnown RBP4.37□□□□□ -1.71
FOXN3-215ENST00000557261 HIST1H1AQ02539 215 aaPredicted RBP4.37□□□□□ -1.71
FOXN3-215ENST00000557261 DEFB136Q30KP8 78 aa4.37□□□□□ -1.71
FOXN3-215ENST00000557261 SMUG1Q53HV7 270 aa4.37□□□□□ -1.71
FOXN3-215ENST00000557261 FAM162BQ5T6X4 162 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms