RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 ALG5Q9Y673 324 aa6.8□□□□□ -1.32
HNRNPC-228ENST00000557033 PKD1P98161 4303 aa6.79□□□□□ -1.32
HNRNPC-228ENST00000557033 TRGV1A0A0A0MS02 117 aa6.79□□□□□ -1.32
HNRNPC-228ENST00000557033 A0A0J9YY99 117 aa6.79□□□□□ -1.32
HNRNPC-228ENST00000557033 PGPA6NDG6 321 aa6.79□□□□□ -1.32
HNRNPC-228ENST00000557033 SLAQ13239 276 aa6.79□□□□□ -1.32
HNRNPC-228ENST00000557033 KRTAP15-1Q3LI76 137 aa6.79□□□□□ -1.32
HNRNPC-228ENST00000557033 PRR9Q5T870 116 aa6.79□□□□□ -1.32
HNRNPC-228ENST00000557033 ATRAIDQ6UW56 229 aa6.79□□□□□ -1.32
HNRNPC-228ENST00000557033 OR10G4Q8NGN3 311 aa6.79□□□□□ -1.32
HNRNPC-228ENST00000557033 OR10G9Q8NGN4 311 aa6.79□□□□□ -1.32
HNRNPC-228ENST00000557033 OR10G8Q8NGN5 311 aa6.79□□□□□ -1.32
HNRNPC-228ENST00000557033 OR10G7Q8NGN6 311 aa6.79□□□□□ -1.32
HNRNPC-228ENST00000557033 CMTM2Q8TAZ6 248 aa6.79□□□□□ -1.32
HNRNPC-228ENST00000557033 ASB13Q8WXK3 278 aa6.79□□□□□ -1.32
HNRNPC-228ENST00000557033 UPK3BQ9BT76 320 aa6.79□□□□□ -1.32
HNRNPC-228ENST00000557033 MED28Q9H204 178 aa6.79□□□□□ -1.32
HNRNPC-228ENST00000557033 TMPRSS5Q9H3S3 457 aa6.79□□□□□ -1.32
HNRNPC-228ENST00000557033 OTORQ9NRC9 128 aa6.79□□□□□ -1.32
HNRNPC-228ENST00000557033 KLF12Q9Y4X4 402 aa6.79□□□□□ -1.32
HNRNPC-228ENST00000557033 KIAA1109Q2LD37 5005 aa6.79□□□□□ -1.32
HNRNPC-228ENST00000557033 FAM74A7A6NL05 159 aa6.78□□□□□ -1.32
HNRNPC-228ENST00000557033 STAG3L3P0CL85 134 aa6.78□□□□□ -1.32
HNRNPC-228ENST00000557033 ESRGQ1W209 222 aa6.78□□□□□ -1.32
HNRNPC-228ENST00000557033 FAM74A3Q4VXF1 159 aa6.78□□□□□ -1.32
HNRNPC-228ENST00000557033 Q6AWC8 147 aa6.78□□□□□ -1.32
HNRNPC-228ENST00000557033 C6orf223Q8N319 242 aa6.78□□□□□ -1.32
HNRNPC-228ENST00000557033 OR2G3Q8NGZ4 309 aa6.78□□□□□ -1.32
HNRNPC-228ENST00000557033 AQP10Q96PS8 301 aa6.78□□□□□ -1.32
HNRNPC-228ENST00000557033 TP53TG3Q9ULZ0 132 aa6.78□□□□□ -1.32
HNRNPC-228ENST00000557033 MBP02144 154 aa6.77□□□□□ -1.33
HNRNPC-228ENST00000557033 SERF2P84101 59 aa6.77□□□□□ -1.33
HNRNPC-228ENST00000557033 KCNIP4Q6PIL6 250 aa6.77□□□□□ -1.33
HNRNPC-228ENST00000557033 Q6ZQT7 251 aa6.77□□□□□ -1.33
HNRNPC-228ENST00000557033 ZNF575Q86XF7 245 aa6.77□□□□□ -1.33
HNRNPC-228ENST00000557033 Q8TAT8 98 aa6.77□□□□□ -1.33
HNRNPC-228ENST00000557033 VSIG2Q96IQ7 327 aa6.77□□□□□ -1.33
HNRNPC-228ENST00000557033 HYLS1Q96M11 299 aa6.77□□□□□ -1.33
HNRNPC-228ENST00000557033 PSMG3Q9BT73 122 aaPredicted RBP6.77□□□□□ -1.33
HNRNPC-228ENST00000557033 Q9HAA7 133 aa6.77□□□□□ -1.33
HNRNPC-228ENST00000557033 A0A096LPF7 62 aa6.76□□□□□ -1.33
HNRNPC-228ENST00000557033 CIDEAO60543 219 aa6.76□□□□□ -1.33
HNRNPC-228ENST00000557033 STAG3L2P0CL84 134 aa6.76□□□□□ -1.33
HNRNPC-228ENST00000557033 RAB2AP61019 212 aa6.76□□□□□ -1.33
HNRNPC-228ENST00000557033 KIAA1644Q3SXP7 199 aa6.76□□□□□ -1.33
HNRNPC-228ENST00000557033 TDRG1Q3Y452 100 aa6.76□□□□□ -1.33
HNRNPC-228ENST00000557033 TTC32Q5I0X7 151 aa6.76□□□□□ -1.33
HNRNPC-228ENST00000557033 IQCF2Q8IXL9 164 aa6.76□□□□□ -1.33
HNRNPC-228ENST00000557033 SUN5Q8TC36 379 aa6.76□□□□□ -1.33
HNRNPC-228ENST00000557033 NTN5Q8WTR8 489 aaPredicted RBP6.76□□□□□ -1.33
HNRNPC-228ENST00000557033 RASL10AQ92737 203 aa6.76□□□□□ -1.33
HNRNPC-228ENST00000557033 PRO0255Q9UI72 69 aa6.76□□□□□ -1.33
HNRNPC-228ENST00000557033 HHLA3Q9XRX5 114 aa6.76□□□□□ -1.33
HNRNPC-228ENST00000557033 MRPS16Q9Y3D3 137 aaKnown RBP6.76□□□□□ -1.33
HNRNPC-228ENST00000557033 DYNC1H1Q14204 4646 aaKnown RBP6.76□□□□□ -1.33
HNRNPC-228ENST00000557033 TRAV21A0A0B4J279 112 aa6.75□□□□□ -1.33
HNRNPC-228ENST00000557033 EIF3GO75821 320 aaKnown RBP eCLIP6.75□□□□□ -1.334e-12■■■□□ 16.7
HNRNPC-228ENST00000557033 GIPP09681 153 aaPredicted RBP6.75□□□□□ -1.33
HNRNPC-228ENST00000557033 CDC34P49427 236 aaPredicted RBP6.75□□□□□ -1.33
HNRNPC-228ENST00000557033 C6orf226Q5I0X4 101 aa6.75□□□□□ -1.33
HNRNPC-228ENST00000557033 MUC21Q5SSG8 566 aa6.75□□□□□ -1.33
HNRNPC-228ENST00000557033 HSD17B11Q8NBQ5 300 aa6.75□□□□□ -1.33
HNRNPC-228ENST00000557033 INO80EQ8NBZ0 244 aaPredicted RBP6.75□□□□□ -1.33
HNRNPC-228ENST00000557033 MRPL16Q9NX20 251 aaKnown RBP6.75□□□□□ -1.33
HNRNPC-228ENST00000557033 MDFICQ9P1T7 246 aa6.75□□□□□ -1.33
HNRNPC-228ENST00000557033 TNFSF18Q9UNG2 199 aa6.75□□□□□ -1.33
HNRNPC-228ENST00000557033 HMGB3O15347 200 aaKnown RBP6.74□□□□□ -1.33
HNRNPC-228ENST00000557033 ARL14EPLP0DKL9 152 aa6.74□□□□□ -1.33
HNRNPC-228ENST00000557033 ATP6V0CP27449 155 aa6.74□□□□□ -1.33
HNRNPC-228ENST00000557033 CRYBA4P53673 196 aa6.74□□□□□ -1.33
HNRNPC-228ENST00000557033 MRPL23Q16540 153 aaKnown RBP6.74□□□□□ -1.33
HNRNPC-228ENST00000557033 GOLT1AQ6ZVE7 132 aa6.74□□□□□ -1.33
HNRNPC-228ENST00000557033 KCNS1Q96KK3 526 aa6.74□□□□□ -1.33
HNRNPC-228ENST00000557033 ACTR3CQ9C0K3 210 aaPredicted RBP6.74□□□□□ -1.33
HNRNPC-228ENST00000557033 TREM1Q9NP99 234 aa6.74□□□□□ -1.33
HNRNPC-228ENST00000557033 ICOSQ9Y6W8 199 aa6.74□□□□□ -1.33
HNRNPC-228ENST00000557033 DNAH11Q96DT5 4516 aa6.73□□□□□ -1.33
HNRNPC-228ENST00000557033 BORCS7-ASMTA0A0B4J1R7 106 aa6.73□□□□□ -1.33
HNRNPC-228ENST00000557033 TRGV4A0A0C4DH28 118 aa6.73□□□□□ -1.33
HNRNPC-228ENST00000557033 CXorf1O96002 111 aa6.73□□□□□ -1.33
HNRNPC-228ENST00000557033 GCHFRP30047 84 aa6.73□□□□□ -1.33
HNRNPC-228ENST00000557033 TMEM183BQ1AE95 376 aa6.73□□□□□ -1.33
HNRNPC-228ENST00000557033 Q5BKY6 102 aa6.73□□□□□ -1.33
HNRNPC-228ENST00000557033 TMEM183AQ8IXX5 376 aa6.73□□□□□ -1.33
HNRNPC-228ENST00000557033 STPG4Q8N801 248 aa6.73□□□□□ -1.33
HNRNPC-228ENST00000557033 C5orf17Q8NAS9 161 aa6.73□□□□□ -1.33
HNRNPC-228ENST00000557033 TVP23CQ96ET8 276 aa6.73□□□□□ -1.33
HNRNPC-228ENST00000557033 NDFIP1Q9BT67 221 aa6.73□□□□□ -1.33
HNRNPC-228ENST00000557033 TMEM167BQ9NRX6 74 aa6.73□□□□□ -1.33
HNRNPC-228ENST00000557033 PKHD1P08F94 4074 aa6.72□□□□□ -1.33
HNRNPC-228ENST00000557033 PCLOQ9Y6V0 5065 aa6.72□□□□□ -1.33
HNRNPC-228ENST00000557033 IGHV3-16A0A0C4DH30 117 aa6.72□□□□□ -1.33
HNRNPC-228ENST00000557033 M0R2P5 195 aa6.72□□□□□ -1.33
HNRNPC-228ENST00000557033 GNRH2O43555 120 aa6.72□□□□□ -1.33
HNRNPC-228ENST00000557033 IGHV3-53P01767 116 aa6.72□□□□□ -1.33
HNRNPC-228ENST00000557033 TCRAP04437 139 aa6.72□□□□□ -1.33
HNRNPC-228ENST00000557033 LYPD5Q6UWN5 251 aa6.72□□□□□ -1.33
HNRNPC-228ENST00000557033 NEGR1Q7Z3B1 354 aa6.72□□□□□ -1.33
HNRNPC-228ENST00000557033 SDF2L1Q9HCN8 221 aa6.72□□□□□ -1.33
HNRNPC-228ENST00000557033 NAGKQ9UJ70 344 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms