RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 SSTP61278 116 aa3.83□□□□□ -1.8
ATXN3-244ENST00000556898 IBA57Q5T440 356 aaKnown RBP3.83□□□□□ -1.8
ATXN3-244ENST00000556898 Q6AWC8 147 aa3.83□□□□□ -1.8
ATXN3-244ENST00000556898 COX8CQ7Z4L0 72 aa3.83□□□□□ -1.8
ATXN3-244ENST00000556898 CSNK1G2-AS1Q8NCQ2 148 aa3.83□□□□□ -1.8
ATXN3-244ENST00000556898 OR10G8Q8NGN5 311 aa3.83□□□□□ -1.8
ATXN3-244ENST00000556898 RCHY1Q96PM5 261 aa3.83□□□□□ -1.8
ATXN3-244ENST00000556898 ODF3Q96PU9 254 aa3.83□□□□□ -1.8
ATXN3-244ENST00000556898 LINC01587Q99440 93 aa3.83□□□□□ -1.8
ATXN3-244ENST00000556898 CSTL1Q9H114 145 aa3.83□□□□□ -1.8
ATXN3-244ENST00000556898 RPS10P5Q9NQ39 176 aa3.83□□□□□ -1.8
ATXN3-244ENST00000556898 TIMM8BQ9Y5J9 83 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-244ENST00000556898 LY96Q9Y6Y9 160 aa3.83□□□□□ -1.8
ATXN3-244ENST00000556898 V9GYV3 84 aa3.83□□□□□ -1.8
ATXN3-244ENST00000556898 AGRNO00468 2067 aa3.82□□□□□ -1.8
ATXN3-244ENST00000556898 TRAV21A0A0B4J279 112 aa3.82□□□□□ -1.8
ATXN3-244ENST00000556898 TRBV7-9A0A0J9YWB2 115 aa3.82□□□□□ -1.8
ATXN3-244ENST00000556898 TMEM189A5PLL7 270 aa3.82□□□□□ -1.8
ATXN3-244ENST00000556898 FABP5P3A8MUU1 101 aa3.82□□□□□ -1.8
ATXN3-244ENST00000556898 SPINK4O60575 86 aa3.82□□□□□ -1.8
ATXN3-244ENST00000556898 INSP01308 110 aa3.82□□□□□ -1.8
ATXN3-244ENST00000556898 ORM1P02763 201 aa3.82□□□□□ -1.8
ATXN3-244ENST00000556898 TYMSP04818 313 aa3.82□□□□□ -1.8
ATXN3-244ENST00000556898 PFN1P07737 140 aaKnown RBP3.82□□□□□ -1.8
ATXN3-244ENST00000556898 TSPOP30536 169 aa3.82□□□□□ -1.8
ATXN3-244ENST00000556898 DEFB135Q30KP9 77 aa3.82□□□□□ -1.8
ATXN3-244ENST00000556898 FAM162BQ5T6X4 162 aa3.82□□□□□ -1.8
ATXN3-244ENST00000556898 ZFAND6Q6FIF0 208 aa3.82□□□□□ -1.8
ATXN3-244ENST00000556898 MORN3Q6PF18 240 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-244ENST00000556898 FAM231DQ6ZW35 169 aa3.82□□□□□ -1.8
ATXN3-244ENST00000556898 SBSPONQ8IVN8 264 aa3.82□□□□□ -1.8
ATXN3-244ENST00000556898 OR2D3Q8NGH3 330 aa3.82□□□□□ -1.8
ATXN3-244ENST00000556898 GTSF1Q8WW33 167 aa3.82□□□□□ -1.8
ATXN3-244ENST00000556898 SFRP2Q96HF1 295 aa3.82□□□□□ -1.8
ATXN3-244ENST00000556898 RPP21Q9H633 154 aaKnown RBP3.82□□□□□ -1.8
ATXN3-244ENST00000556898 OSTCQ9NRP0 149 aa3.82□□□□□ -1.8
ATXN3-244ENST00000556898 MDFICQ9P1T7 246 aa3.82□□□□□ -1.8
ATXN3-244ENST00000556898 LENEPQ9Y5L5 61 aa3.82□□□□□ -1.8
ATXN3-244ENST00000556898 COL7A1Q02388 2944 aa3.81□□□□□ -1.8
ATXN3-244ENST00000556898 IGHV1OR15-1A0A075B7D0 117 aa3.81□□□□□ -1.8
ATXN3-244ENST00000556898 CBY3A6NI87 242 aa3.81□□□□□ -1.8
ATXN3-244ENST00000556898 A8MZ25 164 aa3.81□□□□□ -1.8
ATXN3-244ENST00000556898 B4DEV8 164 aa3.81□□□□□ -1.8
ATXN3-244ENST00000556898 H3BVH4 76 aa3.81□□□□□ -1.8
ATXN3-244ENST00000556898 DEFB4AO15263 64 aa3.81□□□□□ -1.8
ATXN3-244ENST00000556898 P01737 135 aa3.81□□□□□ -1.8
ATXN3-244ENST00000556898 FAM3BP58499 235 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-244ENST00000556898 PNRC1Q12796 327 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-244ENST00000556898 TMEM88Q6PEY1 159 aa3.81□□□□□ -1.8
ATXN3-244ENST00000556898 CBLN2Q8IUK8 224 aa3.81□□□□□ -1.8
ATXN3-244ENST00000556898 SVBPQ8N300 66 aa3.81□□□□□ -1.8
ATXN3-244ENST00000556898 DAZAP1Q96EP5 407 aaKnown RBP3.81□□□□□ -1.8
ATXN3-244ENST00000556898 SMIM12Q96EX1 92 aa3.81□□□□□ -1.8
ATXN3-244ENST00000556898 IGHV3-16A0A0C4DH30 117 aa3.8□□□□□ -1.8
ATXN3-244ENST00000556898 KIR2DL5BA0A0G2JN68 375 aa3.8□□□□□ -1.8
ATXN3-244ENST00000556898 KIR2DL5BA0A0G2JPC4 375 aa3.8□□□□□ -1.8
ATXN3-244ENST00000556898 H7BYZ3 331 aa3.8□□□□□ -1.8
ATXN3-244ENST00000556898 SNAPINO95295 136 aa3.8□□□□□ -1.8
ATXN3-244ENST00000556898 MT-ND4LP03901 98 aa3.8□□□□□ -1.8
ATXN3-244ENST00000556898 IGLC6P0CF74 106 aa3.8□□□□□ -1.8
ATXN3-244ENST00000556898 RNASE3P12724 160 aaKnown RBP3.8□□□□□ -1.8
ATXN3-244ENST00000556898 BTF3P20290 206 aaKnown RBP3.8□□□□□ -1.8
ATXN3-244ENST00000556898 S100A1P23297 94 aa3.8□□□□□ -1.8
ATXN3-244ENST00000556898 APOC4P55056 127 aa3.8□□□□□ -1.8
ATXN3-244ENST00000556898 NUTF2P61970 127 aaKnown RBP3.8□□□□□ -1.8
ATXN3-244ENST00000556898 FAM159AQ6UWV7 190 aa3.8□□□□□ -1.8
ATXN3-244ENST00000556898 ZNF705AQ6ZN79 300 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-244ENST00000556898 KIR2DL5AQ8N109 375 aa3.8□□□□□ -1.8
ATXN3-244ENST00000556898 C15orf54Q8N8G6 183 aa3.8□□□□□ -1.8
ATXN3-244ENST00000556898 C11orf72Q8NBR9 251 aa3.8□□□□□ -1.8
ATXN3-244ENST00000556898 KIR2DL5BQ8NHK3 375 aa3.8□□□□□ -1.8
ATXN3-244ENST00000556898 PGLYRP4Q96LB8 373 aa3.8□□□□□ -1.8
ATXN3-244ENST00000556898 OVOL2Q9BRP0 275 aa3.8□□□□□ -1.8
ATXN3-244ENST00000556898 TMEM208Q9BTX3 173 aa3.8□□□□□ -1.8
ATXN3-244ENST00000556898 TPPP3Q9BW30 176 aa3.8□□□□□ -1.8
ATXN3-244ENST00000556898 GSN-AS1Q9NRJ2 163 aa3.8□□□□□ -1.8
ATXN3-244ENST00000556898 IL36BQ9NZH7 164 aa3.8□□□□□ -1.8
ATXN3-244ENST00000556898 GOLT1BQ9Y3E0 138 aa3.8□□□□□ -1.8
ATXN3-244ENST00000556898 COX11Q9Y6N1 276 aa3.8□□□□□ -1.8
ATXN3-244ENST00000556898 URGCP-MRPS24S4R325 110 aa3.8□□□□□ -1.8
ATXN3-244ENST00000556898 SORL1Q92673 2214 aa3.8□□□□□ -1.8
ATXN3-244ENST00000556898 TGIF2-C20orf24A0A0A6YYL0 155 aa3.79□□□□□ -1.8
ATXN3-244ENST00000556898 PLAC8L1A1L4L8 177 aa3.79□□□□□ -1.8
ATXN3-244ENST00000556898 AMBPP02760 352 aa3.79□□□□□ -1.8
ATXN3-244ENST00000556898 CXCL1P09341 107 aa3.79□□□□□ -1.8
ATXN3-244ENST00000556898 ARMS2P0C7Q2 107 aa3.79□□□□□ -1.8
ATXN3-244ENST00000556898 EMP1P54849 157 aa3.79□□□□□ -1.8
ATXN3-244ENST00000556898 FOXA3P55318 350 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-244ENST00000556898 RHEBQ15382 184 aa3.79□□□□□ -1.8
ATXN3-244ENST00000556898 MRPL54Q6P161 138 aaKnown RBP3.79□□□□□ -1.8
ATXN3-244ENST00000556898 LYZL1Q6UWQ5 148 aa3.79□□□□□ -1.8
ATXN3-244ENST00000556898 NUP35Q8NFH5 326 aa3.79□□□□□ -1.8
ATXN3-244ENST00000556898 OR11H2Q8NH07 326 aa3.79□□□□□ -1.8
ATXN3-244ENST00000556898 OR10AG1Q8NH19 301 aa3.79□□□□□ -1.8
ATXN3-244ENST00000556898 TSKUQ8WUA8 353 aa3.79□□□□□ -1.8
ATXN3-244ENST00000556898 RNF183Q96D59 192 aa3.79□□□□□ -1.8
ATXN3-244ENST00000556898 PYGO2Q9BRQ0 406 aa3.79□□□□□ -1.8
ATXN3-244ENST00000556898 JPT2Q9H910 190 aa3.79□□□□□ -1.8
ATXN3-244ENST00000556898 BIN3Q9NQY0 253 aa3.79□□□□□ -1.8
ATXN3-244ENST00000556898 MSRB1Q9NZV6 116 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms