RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 C5orf51A6NDU8 294 aa5.94□□□□□ -1.46
HNRNPC-227ENST00000556897 PVALBP20472 110 aaPredicted RBP5.94□□□□□ -1.46
HNRNPC-227ENST00000556897 S100A10P60903 97 aa5.94□□□□□ -1.46
HNRNPC-227ENST00000556897 HBG1P69891 147 aa5.94□□□□□ -1.46
HNRNPC-227ENST00000556897 HBG2P69892 147 aa5.94□□□□□ -1.46
HNRNPC-227ENST00000556897 THAP6Q8TBB0 222 aa5.94□□□□□ -1.46
HNRNPC-227ENST00000556897 BAALCQ8WXS3 180 aa5.94□□□□□ -1.46
HNRNPC-227ENST00000556897 PAXXQ9BUH6 204 aa5.94□□□□□ -1.46
HNRNPC-227ENST00000556897 CHAC1Q9BUX1 264 aa5.94□□□□□ -1.46
HNRNPC-227ENST00000556897 TRAV8-3A0A0A6YYJ7 113 aa5.93□□□□□ -1.46
HNRNPC-227ENST00000556897 IGHV3-73A0A0B4J1V6 119 aa5.93□□□□□ -1.46
HNRNPC-227ENST00000556897 FBLL1A6NHQ2 334 aaKnown RBP5.93□□□□□ -1.46
HNRNPC-227ENST00000556897 DIRC3C9JPN6 131 aa5.93□□□□□ -1.46
HNRNPC-227ENST00000556897 TYMSP04818 313 aa5.93□□□□□ -1.46
HNRNPC-227ENST00000556897 S100PP25815 95 aa5.93□□□□□ -1.46
HNRNPC-227ENST00000556897 RHOHQ15669 191 aa5.93□□□□□ -1.46
HNRNPC-227ENST00000556897 CIRBP-AS1Q8TBR5 109 aa5.93□□□□□ -1.46
HNRNPC-227ENST00000556897 TCEAL7Q9BRU2 100 aa5.93□□□□□ -1.46
HNRNPC-227ENST00000556897 PRADC1Q9BSG0 188 aa5.93□□□□□ -1.46
HNRNPC-227ENST00000556897 GTSF1LQ9H1H1 148 aa5.93□□□□□ -1.46
HNRNPC-227ENST00000556897 ALG5Q9Y673 324 aa5.93□□□□□ -1.46
HNRNPC-227ENST00000556897 TRBV6-4A0A1B0GX49 114 aa5.92□□□□□ -1.46
HNRNPC-227ENST00000556897 RBFOX3A6NFN3 312 aa5.92□□□□□ -1.46
HNRNPC-227ENST00000556897 OR7C2O60412 319 aa5.92□□□□□ -1.46
HNRNPC-227ENST00000556897 ATP6V1FQ16864 119 aa5.92□□□□□ -1.46
HNRNPC-227ENST00000556897 ZNF876PQ49A33 203 aa5.92□□□□□ -1.46
HNRNPC-227ENST00000556897 CFAP126Q5VTH2 177 aa5.92□□□□□ -1.46
HNRNPC-227ENST00000556897 DAZ4Q86SG3 579 aaKnown RBP5.92□□□□□ -1.46
HNRNPC-227ENST00000556897 ATP6V0E2Q8NHE4 81 aa5.92□□□□□ -1.46
HNRNPC-227ENST00000556897 C2orf50Q96LR7 162 aa5.92□□□□□ -1.46
HNRNPC-227ENST00000556897 SDF2L1Q9HCN8 221 aa5.92□□□□□ -1.46
HNRNPC-227ENST00000556897 DAZ3Q9NR90 486 aaKnown RBP5.92□□□□□ -1.46
HNRNPC-227ENST00000556897 LENEPQ9Y5L5 61 aa5.92□□□□□ -1.46
HNRNPC-227ENST00000556897 RNF213Q63HN8 5207 aa5.92□□□□□ -1.46
HNRNPC-227ENST00000556897 TRAV21A0A0B4J279 112 aa5.91□□□□□ -1.46
HNRNPC-227ENST00000556897 F6UZH7 168 aa5.91□□□□□ -1.46
HNRNPC-227ENST00000556897 S100A9P06702 114 aaKnown RBP5.91□□□□□ -1.46
HNRNPC-227ENST00000556897 RAB4BP61018 213 aa5.91□□□□□ -1.46
HNRNPC-227ENST00000556897 UBE2L3P68036 154 aaKnown RBP5.91□□□□□ -1.46
HNRNPC-227ENST00000556897 NHLH2Q02577 135 aa5.91□□□□□ -1.46
HNRNPC-227ENST00000556897 RAB32Q13637 225 aa5.91□□□□□ -1.46
HNRNPC-227ENST00000556897 DPPA3Q6W0C5 159 aa5.91□□□□□ -1.46
HNRNPC-227ENST00000556897 TMED6Q8WW62 240 aa5.91□□□□□ -1.46
HNRNPC-227ENST00000556897 SEC22CQ9BRL7 303 aa5.91□□□□□ -1.46
HNRNPC-227ENST00000556897 RPH3ALQ9UNE2 315 aa5.91□□□□□ -1.46
HNRNPC-227ENST00000556897 FAM240BA0A1B0GVZ2 78 aa5.9□□□□□ -1.46
HNRNPC-227ENST00000556897 LINC00587B1AMM8 73 aa5.9□□□□□ -1.46
HNRNPC-227ENST00000556897 INMT-MINDY4F8WBC2 141 aa5.9□□□□□ -1.46
HNRNPC-227ENST00000556897 PLA2G10O15496 165 aa5.9□□□□□ -1.46
HNRNPC-227ENST00000556897 RS1O15537 224 aa5.9□□□□□ -1.46
HNRNPC-227ENST00000556897 IGLV2-8P01709 118 aa5.9□□□□□ -1.46
HNRNPC-227ENST00000556897 IL15RAQ13261 267 aa5.9□□□□□ -1.46
HNRNPC-227ENST00000556897 ACOT6Q3I5F7 207 aaPredicted RBP5.9□□□□□ -1.46
HNRNPC-227ENST00000556897 Q8N976 141 aa5.9□□□□□ -1.46
HNRNPC-227ENST00000556897 OR5C1Q8NGR4 320 aa5.9□□□□□ -1.46
HNRNPC-227ENST00000556897 ASB13Q8WXK3 278 aa5.9□□□□□ -1.46
HNRNPC-227ENST00000556897 TVP23CQ96ET8 276 aa5.9□□□□□ -1.46
HNRNPC-227ENST00000556897 DNAJC30Q96LL9 226 aa5.9□□□□□ -1.46
HNRNPC-227ENST00000556897 ATP5SQ99766 215 aa5.9□□□□□ -1.46
HNRNPC-227ENST00000556897 MED28Q9H204 178 aa5.9□□□□□ -1.46
HNRNPC-227ENST00000556897 TREM1Q9NP99 234 aa5.9□□□□□ -1.46
HNRNPC-227ENST00000556897 TRAV8-1A0A0A6YYK1 113 aa5.89□□□□□ -1.47
HNRNPC-227ENST00000556897 RNF222A6NCQ9 220 aa5.89□□□□□ -1.47
HNRNPC-227ENST00000556897 GGTLC3B5MD39 225 aa5.89□□□□□ -1.47
HNRNPC-227ENST00000556897 LYRM1O43325 122 aa5.89□□□□□ -1.47
HNRNPC-227ENST00000556897 CIDEAO60543 219 aa5.89□□□□□ -1.47
HNRNPC-227ENST00000556897 MGST1P10620 155 aaKnown RBP5.89□□□□□ -1.47
HNRNPC-227ENST00000556897 HNRNPA3P51991 378 aaKnown RBP5.89□□□□□ -1.47
HNRNPC-227ENST00000556897 GOLT1AQ6ZVE7 132 aa5.89□□□□□ -1.47
HNRNPC-227ENST00000556897 CMTM2Q8TAZ6 248 aa5.89□□□□□ -1.47
HNRNPC-227ENST00000556897 KCNS1Q96KK3 526 aa5.89□□□□□ -1.47
HNRNPC-227ENST00000556897 NMES1Q9C002 83 aa5.89□□□□□ -1.47
HNRNPC-227ENST00000556897 KCNIP2Q9NS61 270 aa5.89□□□□□ -1.47
HNRNPC-227ENST00000556897 COX11Q9Y6N1 276 aa5.89□□□□□ -1.47
HNRNPC-227ENST00000556897 IGKV2D-24A0A075B6R9 120 aa5.88□□□□□ -1.47
HNRNPC-227ENST00000556897 PGPA6NDG6 321 aa5.88□□□□□ -1.47
HNRNPC-227ENST00000556897 GAGE12JA6NER3 117 aa5.88□□□□□ -1.47
HNRNPC-227ENST00000556897 EIF3GO75821 320 aaKnown RBP eCLIP5.88□□□□□ -1.47
HNRNPC-227ENST00000556897 TCRBP04435 133 aa5.88□□□□□ -1.47
HNRNPC-227ENST00000556897 RPL35P42766 123 aaKnown RBP5.88□□□□□ -1.47
HNRNPC-227ENST00000556897 AKR1D1P51857 326 aa5.88□□□□□ -1.47
HNRNPC-227ENST00000556897 RPL37AP61513 92 aaKnown RBP5.88□□□□□ -1.47
HNRNPC-227ENST00000556897 GAGE1Q13065 139 aa5.88□□□□□ -1.47
HNRNPC-227ENST00000556897 GAGE4Q13068 117 aa5.88□□□□□ -1.47
HNRNPC-227ENST00000556897 GAGE5Q13069 117 aa5.88□□□□□ -1.47
HNRNPC-227ENST00000556897 GAGE13Q4V321 117 aa5.88□□□□□ -1.47
HNRNPC-227ENST00000556897 RMI2Q96E14 147 aa5.88□□□□□ -1.47
HNRNPC-227ENST00000556897 WDR61Q9GZS3 305 aaKnown RBP5.88□□□□□ -1.47
HNRNPC-227ENST00000556897 OTORQ9NRC9 128 aa5.88□□□□□ -1.47
HNRNPC-227ENST00000556897 NUDT15Q9NV35 164 aa5.88□□□□□ -1.47
HNRNPC-227ENST00000556897 PGPEP1LA6NFU8 196 aa5.87□□□□□ -1.47
HNRNPC-227ENST00000556897 LINC00694P0DN24 101 aa5.87□□□□□ -1.47
HNRNPC-227ENST00000556897 LBHQ53QV2 105 aaPredicted RBP5.87□□□□□ -1.47
HNRNPC-227ENST00000556897 KHDC3LQ587J8 217 aa5.87□□□□□ -1.47
HNRNPC-227ENST00000556897 ZNF506Q5JVG8 444 aa5.87□□□□□ -1.47
HNRNPC-227ENST00000556897 UQCC3Q6UW78 93 aa5.87□□□□□ -1.47
HNRNPC-227ENST00000556897 SFT2D1Q8WV19 159 aa5.87□□□□□ -1.47
HNRNPC-227ENST00000556897 DAZAP1Q96EP5 407 aaKnown RBP5.87□□□□□ -1.47
HNRNPC-227ENST00000556897 SGK494Q96LW2 274 aa5.87□□□□□ -1.47
HNRNPC-227ENST00000556897 C9orf85Q96MD7 179 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms