RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 OR5D14Q8NGL3 314 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 OR4C16Q8NGL9 310 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 OR51E1Q8TCB6 317 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 FAM19A4Q96LR4 140 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 AP1S3Q96PC3 154 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 OR8B2Q96RD0 313 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 IMMP2LQ96T52 175 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 LINC01587Q99440 93 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 SPIN2AQ99865 258 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 SPIN2BQ9BPZ2 258 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 TMEM147Q9BVK8 224 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 GNB1LQ9BYB4 327 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 SLIRPQ9GZT3 109 aaKnown RBP2.76□□□□□ -1.97
PRPF39-209ENST00000556353 KCNIP2Q9NS61 270 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 TMEM100Q9NV29 134 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 FKBP11Q9NYL4 201 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 ZNRD1Q9P1U0 126 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 RPUSD1Q9UJJ7 312 aaKnown RBP2.76□□□□□ -1.97
PRPF39-209ENST00000556353 WASHC3Q9Y3C0 194 aa2.76□□□□□ -1.97
PRPF39-209ENST00000556353 FAT2Q9NYQ8 4349 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-209ENST00000556353 IGHV1-69DA0A0B4J2H0 117 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 TRDV1A0A1B0GX56 115 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 FAM183AA6NL82 134 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 KNCNA6PVL3 124 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 HMSDA8MTL9 139 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 ZNF705GA8MUZ8 300 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-209ENST00000556353 TMEM262E9PQX1 116 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 CCDC179H3BU77 68 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 J3QQQ9 107 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 ISLRO14498 428 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 HIST1H2BKO60814 126 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 PDCD6O75340 191 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 CFDP00746 253 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-209ENST00000556353 IGHV1-69P01742 117 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 HLA-DRB1P01911 266 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 HIST1H2BJP06899 126 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 HIST1H2BOP23527 126 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 HIST1H2BBP33778 126 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 PRSS3P35030 304 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 OPRK1P41145 380 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 HIST1H2BDP58876 126 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 GABARAPL2P60520 117 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 HIST1H2BCP62807 126 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 HIST2H2BEQ16778 126 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-209ENST00000556353 KPRPQ5T749 579 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-209ENST00000556353 Q6AWC8 147 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 ZNF880Q6PDB4 577 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 LCN15Q6UWW0 184 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 SLC25A26Q70HW3 274 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 VMO1Q7Z5L0 202 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 SAXO1Q8IYX7 474 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 LINC00471Q8N535 108 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 ANKRD29Q8N6D5 301 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 LY6G5BQ8NDX9 201 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 HIST1H2BHQ93079 126 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 TMEM230Q96A57 120 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 YPEL4Q96NS1 127 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 GAFA1Q96PS6 74 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 CCL13Q99616 98 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 HIST1H2BNQ99877 126 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 HIST1H2BMQ99879 126 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 THTPAQ9BU02 230 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 TSSK6Q9BXA6 273 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 MRPL20Q9BYC9 149 aaKnown RBP2.75□□□□□ -1.97
PRPF39-209ENST00000556353 DUSP21Q9H596 190 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 EDA2RQ9HAV5 297 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 KAAG1Q9UBP8 84 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 ZNF222Q9UK12 451 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 FUT9Q9Y231 359 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 ORC6Q9Y5N6 252 aa2.75□□□□□ -1.97
PRPF39-209ENST00000556353 DNAH17Q9UFH2 4485 aa2.74□□□□□ -1.97
PRPF39-209ENST00000556353 IGKV1D-17A0A075B6S4 117 aa2.74□□□□□ -1.97
PRPF39-209ENST00000556353 TRAV4A0A0B4J268 109 aa2.74□□□□□ -1.97
PRPF39-209ENST00000556353 LOC107984640A0A0U1RRK4 108 aa2.74□□□□□ -1.97
PRPF39-209ENST00000556353 IGLC7A0M8Q6 106 aa2.74□□□□□ -1.97
PRPF39-209ENST00000556353 C7orf66A4D0T2 115 aa2.74□□□□□ -1.97
PRPF39-209ENST00000556353 IZUMO1RA6ND01 250 aa2.74□□□□□ -1.97
PRPF39-209ENST00000556353 J3QT63 122 aa2.74□□□□□ -1.97
PRPF39-209ENST00000556353 K7EP34 96 aa2.74□□□□□ -1.97
PRPF39-209ENST00000556353 FCN1O00602 326 aa2.74□□□□□ -1.97
PRPF39-209ENST00000556353 TAX1BP3O14907 124 aa2.74□□□□□ -1.97
PRPF39-209ENST00000556353 IGLV3-1P01715 115 aa2.74□□□□□ -1.97
PRPF39-209ENST00000556353 HLA-DQB1P01920 261 aa2.74□□□□□ -1.97
PRPF39-209ENST00000556353 EIF4EP06730 217 aaKnown RBP2.74□□□□□ -1.97
PRPF39-209ENST00000556353 ATP5G3P48201 142 aa2.74□□□□□ -1.97
PRPF39-209ENST00000556353 TMEM258P61165 79 aa2.74□□□□□ -1.97
PRPF39-209ENST00000556353 YPEL3P61236 119 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-209ENST00000556353 HLA-DRB3P79483 266 aa2.74□□□□□ -1.97
PRPF39-209ENST00000556353 ATP5G2Q06055 141 aa2.74□□□□□ -1.97
PRPF39-209ENST00000556353 Q0VG73 95 aa2.74□□□□□ -1.97
PRPF39-209ENST00000556353 RRN3P1Q2M238 152 aa2.74□□□□□ -1.97
PRPF39-209ENST00000556353 TDRG1Q3Y452 100 aa2.74□□□□□ -1.97
PRPF39-209ENST00000556353 TTC32Q5I0X7 151 aa2.74□□□□□ -1.97
PRPF39-209ENST00000556353 LYRM7Q5U5X0 104 aa2.74□□□□□ -1.97
PRPF39-209ENST00000556353 UNQ5815/PRO19632Q6UWF5 114 aa2.74□□□□□ -1.97
PRPF39-209ENST00000556353 Q6ZUT4 128 aa2.74□□□□□ -1.97
PRPF39-209ENST00000556353 DAZ4Q86SG3 579 aaKnown RBP2.74□□□□□ -1.97
PRPF39-209ENST00000556353 DYNAPQ8N1N2 210 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms