RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 WDR61Q9GZS3 305 aaKnown RBP7.05□□□□□ -1.28
SYNE2-221ENST00000556342 GTSF1LQ9H1H1 148 aa7.05□□□□□ -1.28
SYNE2-221ENST00000556342 NUDT15Q9NV35 164 aa7.05□□□□□ -1.28
SYNE2-221ENST00000556342 TRAV8-3A0A0A6YYJ7 113 aa7.04□□□□□ -1.28
SYNE2-221ENST00000556342 IGHV3-73A0A0B4J1V6 119 aa7.04□□□□□ -1.28
SYNE2-221ENST00000556342 F6UZH7 168 aa7.04□□□□□ -1.28
SYNE2-221ENST00000556342 RS1O15537 224 aa7.04□□□□□ -1.28
SYNE2-221ENST00000556342 ZNF876PQ49A33 203 aa7.04□□□□□ -1.28
SYNE2-221ENST00000556342 DPPA3Q6W0C5 159 aa7.04□□□□□ -1.28
SYNE2-221ENST00000556342 CMTM2Q8TAZ6 248 aa7.04□□□□□ -1.28
SYNE2-221ENST00000556342 TVP23CQ96ET8 276 aa7.04□□□□□ -1.28
SYNE2-221ENST00000556342 KCNS1Q96KK3 526 aa7.04□□□□□ -1.28
SYNE2-221ENST00000556342 RPH3ALQ9UNE2 315 aa7.04□□□□□ -1.28
SYNE2-221ENST00000556342 C17orf112F2Z3M2 114 aa7.03□□□□□ -1.28
SYNE2-221ENST00000556342 ASAH1Q13510 395 aa7.03□□□□□ -1.28
SYNE2-221ENST00000556342 KHDC3LQ587J8 217 aa7.03□□□□□ -1.28
SYNE2-221ENST00000556342 GOLT1AQ6ZVE7 132 aa7.03□□□□□ -1.28
SYNE2-221ENST00000556342 ASB13Q8WXK3 278 aa7.03□□□□□ -1.28
SYNE2-221ENST00000556342 BAALCQ8WXS3 180 aa7.03□□□□□ -1.28
SYNE2-221ENST00000556342 CHAC1Q9BUX1 264 aa7.03□□□□□ -1.28
SYNE2-221ENST00000556342 TREM1Q9NP99 234 aa7.03□□□□□ -1.28
SYNE2-221ENST00000556342 OTORQ9NRC9 128 aa7.03□□□□□ -1.28
SYNE2-221ENST00000556342 TRAV8-1A0A0A6YYK1 113 aa7.02□□□□□ -1.29
SYNE2-221ENST00000556342 KRTAP23-1A1A580 65 aa7.02□□□□□ -1.29
SYNE2-221ENST00000556342 PGPA6NDG6 321 aa7.02□□□□□ -1.29
SYNE2-221ENST00000556342 MGST1P10620 155 aaKnown RBP7.02□□□□□ -1.29
SYNE2-221ENST00000556342 TAS2R45P59539 299 aa7.02□□□□□ -1.29
SYNE2-221ENST00000556342 C21orf62-AS1Q17RA5 79 aa7.02□□□□□ -1.29
SYNE2-221ENST00000556342 TOR2AQ5JU69 321 aa7.02□□□□□ -1.29
SYNE2-221ENST00000556342 FFAR4Q5NUL3 377 aa7.02□□□□□ -1.29
SYNE2-221ENST00000556342 FAM74A1Q5RGS3 127 aa7.02□□□□□ -1.29
SYNE2-221ENST00000556342 DAZ4Q86SG3 579 aaKnown RBP7.02□□□□□ -1.29
SYNE2-221ENST00000556342 NMES1Q9C002 83 aa7.02□□□□□ -1.29
SYNE2-221ENST00000556342 DAZ3Q9NR90 486 aaKnown RBP7.02□□□□□ -1.29
SYNE2-221ENST00000556342 RBFOX3A6NFN3 312 aa7.01□□□□□ -1.29
SYNE2-221ENST00000556342 GGTLC3B5MD39 225 aa7.01□□□□□ -1.29
SYNE2-221ENST00000556342 EIF3GO75821 320 aaKnown RBP eCLIP7.01□□□□□ -1.29
SYNE2-221ENST00000556342 SLPIP03973 132 aa7.01□□□□□ -1.29
SYNE2-221ENST00000556342 ZNF506Q5JVG8 444 aa7.01□□□□□ -1.29
SYNE2-221ENST00000556342 ARL6IP6Q8N6S5 226 aa7.01□□□□□ -1.29
SYNE2-221ENST00000556342 CIRBP-AS1Q8TBR5 109 aa7.01□□□□□ -1.29
SYNE2-221ENST00000556342 PTH2Q96A98 100 aa7.01□□□□□ -1.29
SYNE2-221ENST00000556342 C9orf85Q96MD7 179 aa7.01□□□□□ -1.29
SYNE2-221ENST00000556342 SH3BGRL3Q9H299 93 aa7.01□□□□□ -1.29
SYNE2-221ENST00000556342 OR5AC2Q9NZP5 309 aa7.01□□□□□ -1.29
SYNE2-221ENST00000556342 C11orf21Q9P2W6 132 aa7.01□□□□□ -1.29
SYNE2-221ENST00000556342 COX11Q9Y6N1 276 aa7.01□□□□□ -1.29
SYNE2-221ENST00000556342 PKHD1L1Q86WI1 4243 aa7□□□□□ -1.29
SYNE2-221ENST00000556342 GAGE12JA6NER3 117 aa7□□□□□ -1.29
SYNE2-221ENST00000556342 PGPEP1LA6NFU8 196 aa7□□□□□ -1.29
SYNE2-221ENST00000556342 LINC00694P0DN24 101 aa7□□□□□ -1.29
SYNE2-221ENST00000556342 GAGE1Q13065 139 aa7□□□□□ -1.29
SYNE2-221ENST00000556342 GAGE4Q13068 117 aa7□□□□□ -1.29
SYNE2-221ENST00000556342 GAGE5Q13069 117 aa7□□□□□ -1.29
SYNE2-221ENST00000556342 Q8N976 141 aa7□□□□□ -1.29
SYNE2-221ENST00000556342 MBD2Q9UBB5 411 aa7□□□□□ -1.29
SYNE2-221ENST00000556342 A0A1B0GVG6 124 aa6.99□□□□□ -1.29
SYNE2-221ENST00000556342 RNF222A6NCQ9 220 aa6.99□□□□□ -1.29
SYNE2-221ENST00000556342 H0YIZ8 118 aa6.99□□□□□ -1.29
SYNE2-221ENST00000556342 SIX6O95475 246 aa6.99□□□□□ -1.29
SYNE2-221ENST00000556342 IGLV2-8P01709 118 aa6.99□□□□□ -1.29
SYNE2-221ENST00000556342 ZNF80P51504 273 aaPredicted RBP6.99□□□□□ -1.29
SYNE2-221ENST00000556342 GNG5P63218 68 aa6.99□□□□□ -1.29
SYNE2-221ENST00000556342 ACOT6Q3I5F7 207 aaPredicted RBP6.99□□□□□ -1.29
SYNE2-221ENST00000556342 LRRC37A5PQ49AS3 106 aa6.99□□□□□ -1.29
SYNE2-221ENST00000556342 RMI2Q96E14 147 aa6.99□□□□□ -1.29
SYNE2-221ENST00000556342 SGK494Q96LW2 274 aa6.99□□□□□ -1.29
SYNE2-221ENST00000556342 NDFIP1Q9BT67 221 aa6.99□□□□□ -1.29
SYNE2-221ENST00000556342 IGKV2D-24A0A075B6R9 120 aa6.98□□□□□ -1.29
SYNE2-221ENST00000556342 A0A087WWC5 75 aa6.98□□□□□ -1.29
SYNE2-221ENST00000556342 TAAR5O14804 337 aa6.98□□□□□ -1.29
SYNE2-221ENST00000556342 RNASE3P12724 160 aaKnown RBP6.98□□□□□ -1.29
SYNE2-221ENST00000556342 PQLC2Q6ZP29 291 aa6.98□□□□□ -1.29
SYNE2-221ENST00000556342 CYB561D1Q8N8Q1 229 aa6.98□□□□□ -1.29
SYNE2-221ENST00000556342 TMEM75Q8N9X5 138 aa6.98□□□□□ -1.29
SYNE2-221ENST00000556342 DNAJC30Q96LL9 226 aa6.98□□□□□ -1.29
SYNE2-221ENST00000556342 PARLQ9H300 379 aa6.98□□□□□ -1.29
SYNE2-221ENST00000556342 FAM240BA0A1B0GVZ2 78 aa6.97□□□□□ -1.29
SYNE2-221ENST00000556342 GCGP01275 180 aa6.97□□□□□ -1.29
SYNE2-221ENST00000556342 ZFP2Q6ZN57 461 aa6.97□□□□□ -1.29
SYNE2-221ENST00000556342 LINC00299Q6ZSB3 139 aa6.97□□□□□ -1.29
SYNE2-221ENST00000556342 Q9UF83 564 aa6.97□□□□□ -1.29
SYNE2-221ENST00000556342 SERTM2A0A1B0GWG4 89 aa6.96□□□□□ -1.3
SYNE2-221ENST00000556342 A8MWV9 139 aa6.96□□□□□ -1.3
SYNE2-221ENST00000556342 IGLV2-11P01706 119 aa6.96□□□□□ -1.3
SYNE2-221ENST00000556342 SEC11BP0C7V7 166 aa6.96□□□□□ -1.3
SYNE2-221ENST00000556342 RPL37AP61513 92 aaKnown RBP6.96□□□□□ -1.3
SYNE2-221ENST00000556342 NIT1Q86X76 327 aa6.96□□□□□ -1.3
SYNE2-221ENST00000556342 OR2T35Q8NGX2 323 aa6.96□□□□□ -1.3
SYNE2-221ENST00000556342 SCGB1C1Q8TD33 95 aa6.96□□□□□ -1.3
SYNE2-221ENST00000556342 LINC00479Q96M42 142 aa6.96□□□□□ -1.3
SYNE2-221ENST00000556342 SAMD10Q9BYL1 202 aa6.96□□□□□ -1.3
SYNE2-221ENST00000556342 KLK12Q9UKR0 248 aa6.96□□□□□ -1.3
SYNE2-221ENST00000556342 HSPB11Q9Y547 144 aa6.96□□□□□ -1.3
SYNE2-221ENST00000556342 URGCP-MRPS24S4R325 110 aa6.96□□□□□ -1.3
SYNE2-221ENST00000556342 A0A1W2PPV4 95 aa6.95□□□□□ -1.3
SYNE2-221ENST00000556342 TCRAP04437 139 aa6.95□□□□□ -1.3
SYNE2-221ENST00000556342 HNRNPA3P51991 378 aaKnown RBP6.95□□□□□ -1.3
SYNE2-221ENST00000556342 FGF8P55075 233 aaPredicted RBP6.95□□□□□ -1.3
SYNE2-221ENST00000556342 RAB2AP61019 212 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms