RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 LINC00312Q9Y6C7 94 aa2.12□□□□□ -2.07
CKS1BP1-201ENST00000555221 WNK1Q9H4A3 2382 aa2.12□□□□□ -2.07
CKS1BP1-201ENST00000555221 A0A096LNT2 108 aa2.11□□□□□ -2.07
CKS1BP1-201ENST00000555221 TMEM30CPA0ZSE6 113 aa2.11□□□□□ -2.07
CKS1BP1-201ENST00000555221 OR7C1O76099 320 aaPredicted RBP2.11□□□□□ -2.07
CKS1BP1-201ENST00000555221 EDDM3BP56851 147 aa2.11□□□□□ -2.07
CKS1BP1-201ENST00000555221 ARF6P62330 175 aa2.11□□□□□ -2.07
CKS1BP1-201ENST00000555221 EMX1Q04741 257 aaPredicted RBP2.11□□□□□ -2.07
CKS1BP1-201ENST00000555221 AKR1C1Q04828 323 aa2.11□□□□□ -2.07
CKS1BP1-201ENST00000555221 MIAQ16674 131 aa2.11□□□□□ -2.07
CKS1BP1-201ENST00000555221 KRTAP13-4Q3LI77 160 aa2.11□□□□□ -2.07
CKS1BP1-201ENST00000555221 OR10K2Q6IF99 312 aa2.11□□□□□ -2.07
CKS1BP1-201ENST00000555221 LPCAT3Q6P1A2 487 aa2.11□□□□□ -2.07
CKS1BP1-201ENST00000555221 CD200R1LQ6Q8B3 271 aa2.11□□□□□ -2.07
CKS1BP1-201ENST00000555221 GLIPR1L1Q6UWM5 242 aa2.11□□□□□ -2.07
CKS1BP1-201ENST00000555221 HEPN1Q6WQI6 88 aa2.11□□□□□ -2.07
CKS1BP1-201ENST00000555221 ZNF826PQ6ZT77 177 aa2.11□□□□□ -2.07
CKS1BP1-201ENST00000555221 ADAT3Q96EY9 351 aaPredicted RBP2.11□□□□□ -2.07
CKS1BP1-201ENST00000555221 CHST6Q9GZX3 395 aa2.11□□□□□ -2.07
CKS1BP1-201ENST00000555221 CACFD1Q9UGQ2 172 aa2.11□□□□□ -2.07
CKS1BP1-201ENST00000555221 TRAPPC2LQ9UL33 140 aa2.11□□□□□ -2.07
CKS1BP1-201ENST00000555221 ANAPC10Q9UM13 185 aa2.11□□□□□ -2.07
CKS1BP1-201ENST00000555221 DOCK11Q5JSL3 2073 aa2.11□□□□□ -2.07
CKS1BP1-201ENST00000555221 ARHGAP32A7KAX9 2087 aa2.1□□□□□ -2.07
CKS1BP1-201ENST00000555221 MGAM2Q2M2H8 2515 aa2.1□□□□□ -2.07
CKS1BP1-201ENST00000555221 MEIKINA0A087WXM9 373 aa2.1□□□□□ -2.07
CKS1BP1-201ENST00000555221 ODAMA1E959 279 aa2.1□□□□□ -2.07
CKS1BP1-201ENST00000555221 IFITM5A6NNB3 132 aa2.1□□□□□ -2.07
CKS1BP1-201ENST00000555221 AIPO00170 330 aa2.1□□□□□ -2.07
CKS1BP1-201ENST00000555221 NPFFO15130 113 aa2.1□□□□□ -2.07
CKS1BP1-201ENST00000555221 SLC22A1O15245 554 aa2.1□□□□□ -2.07
CKS1BP1-201ENST00000555221 CYB5BO43169 146 aa2.1□□□□□ -2.07
CKS1BP1-201ENST00000555221 CREBL2O60519 120 aaPredicted RBP2.1□□□□□ -2.07
CKS1BP1-201ENST00000555221 OR2H2O95918 312 aa2.1□□□□□ -2.07
CKS1BP1-201ENST00000555221 DYNLT3P51808 116 aa2.1□□□□□ -2.07
CKS1BP1-201ENST00000555221 GTF2A1P52655 376 aaPredicted RBP2.1□□□□□ -2.07
CKS1BP1-201ENST00000555221 MRPS10P82664 201 aaKnown RBP2.1□□□□□ -2.07
CKS1BP1-201ENST00000555221 C3orf56Q8N813 242 aa2.1□□□□□ -2.07
CKS1BP1-201ENST00000555221 OR11H6Q8NGC7 330 aa2.1□□□□□ -2.07
CKS1BP1-201ENST00000555221 OR10X1Q8NGY0 326 aa2.1□□□□□ -2.07
CKS1BP1-201ENST00000555221 SGMS2Q8NHU3 365 aa2.1□□□□□ -2.07
CKS1BP1-201ENST00000555221 ARL11Q969Q4 196 aa2.1□□□□□ -2.07
CKS1BP1-201ENST00000555221 TMEM203Q969S6 136 aa2.1□□□□□ -2.07
CKS1BP1-201ENST00000555221 DIRAS2Q96HU8 199 aa2.1□□□□□ -2.07
CKS1BP1-201ENST00000555221 GAFA1Q96PS6 74 aa2.1□□□□□ -2.07
CKS1BP1-201ENST00000555221 MRPS26Q9BYN8 205 aaKnown RBP2.1□□□□□ -2.07
CKS1BP1-201ENST00000555221 DCSTAMPQ9H295 470 aa2.1□□□□□ -2.07
CKS1BP1-201ENST00000555221 TMEM133Q9H2Q1 129 aa2.1□□□□□ -2.07
CKS1BP1-201ENST00000555221 PXMP4Q9Y6I8 212 aa2.1□□□□□ -2.07
CKS1BP1-201ENST00000555221 ZANQ9Y493 2812 aa2.1□□□□□ -2.07
CKS1BP1-201ENST00000555221 HRNRQ86YZ3 2850 aaPredicted RBP2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 CHD3Q12873 2000 aaKnown RBP2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 IGHV3-64A0A075B6Q5 118 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 IGKV1-9A0A0C4DH69 117 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 PNMA8CA0A1B0GUJ8 204 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 A6NIN4 97 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 M0R129 80 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 GEMIN2O14893 280 aaKnown RBP2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 YPEL1O60688 119 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 ZNF737O75373 536 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 ATG12O94817 140 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 NFYBP25208 207 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 S100A5P33763 92 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 SDC2P34741 201 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 RPL5P46777 297 aaKnown RBP2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 RAB13P51153 203 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 EMP1P54849 157 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 TMBIM6P55061 237 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 GNG2P59768 71 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 SSBP1Q04837 148 aaKnown RBP2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 AESQ08117 197 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 FABP9Q0Z7S8 132 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 EDDM3AQ14507 147 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 LYZL1Q6UWQ5 148 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 Q6ZS49 121 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 VMO1Q7Z5L0 202 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 LINC00311Q8N616 119 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 TCTEX1D1Q8N7M0 179 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 OR51A4Q8NGJ6 313 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 OR10J5Q8NHC4 309 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 PTH2Q96A98 100 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 YPEL2Q96QA6 119 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 CMSS1Q9BQ75 279 aaKnown RBP2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 GINS4Q9BRT9 223 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 TTTY13Q9BZ97 58 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 TTTY10Q9BZA0 68 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 ATG5Q9H1Y0 275 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 TAS2R8Q9NYW2 309 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 TAS2R4Q9NYW5 299 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 IDI2-AS1Q9NZ38 188 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 JPT1Q9UK76 154 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 PRELID1Q9Y255 219 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 LSM2Q9Y333 95 aaKnown RBP2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 PRELID3BQ9Y3B1 194 aa2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 RBM7Q9Y580 266 aaKnown RBP2.09□□□□□ -2.07
CKS1BP1-201ENST00000555221 MXRA5Q9NR99 2828 aa2.09□□□□□ -2.08
CKS1BP1-201ENST00000555221 TMSB15BA0A087X1C1 80 aa2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 CLPSL1A2RUU4 121 aa2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 TMEM14DPA8MWL7 114 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms