RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 KLHL30-AS1Q8NEE0 82 aa12.01□□□□□ -0.49
SYNE3-203ENST00000554873 ANKRD11Q6UB99 2663 aaPredicted RBP12□□□□□ -0.49
SYNE3-203ENST00000554873 WIPF1O43516 503 aa12□□□□□ -0.49
SYNE3-203ENST00000554873 Q8TAT8 98 aa12□□□□□ -0.49
SYNE3-203ENST00000554873 TOMM6Q96B49 74 aa12□□□□□ -0.49
SYNE3-203ENST00000554873 PIEZO2Q9H5I5 2752 aa12□□□□□ -0.49
SYNE3-203ENST00000554873 H3BMM0 161 aa12□□□□□ -0.49
SYNE3-203ENST00000554873 ATXN8Q156A1 80 aa12□□□□□ -0.49
SYNE3-203ENST00000554873 LINC01620Q4KN68 170 aa12□□□□□ -0.49
SYNE3-203ENST00000554873 UBE2WQ96B02 151 aa12□□□□□ -0.49
SYNE3-203ENST00000554873 TRBV7-7A0A0K0K1E9 115 aa11.99□□□□□ -0.49
SYNE3-203ENST00000554873 M0R2P5 195 aa11.99□□□□□ -0.49
SYNE3-203ENST00000554873 RNF125Q96EQ8 232 aa11.99□□□□□ -0.49
SYNE3-203ENST00000554873 S4R3C0 116 aa11.99□□□□□ -0.49
SYNE3-203ENST00000554873 PF4V1P10720 104 aa11.99□□□□□ -0.49
SYNE3-203ENST00000554873 ORMDL2Q53FV1 153 aa11.99□□□□□ -0.49
SYNE3-203ENST00000554873 BAALCQ8WXS3 180 aa11.99□□□□□ -0.49
SYNE3-203ENST00000554873 LY6LH3BQJ8 138 aa11.98□□□□□ -0.49
SYNE3-203ENST00000554873 TRGV3P03979 118 aa11.98□□□□□ -0.49
SYNE3-203ENST00000554873 LRRC75A-AS1Q8N1F1 130 aa11.98□□□□□ -0.49
SYNE3-203ENST00000554873 KLK15Q9H2R5 256 aa11.98□□□□□ -0.49
SYNE3-203ENST00000554873 TRAV26-2A0A0B4J265 109 aa11.98□□□□□ -0.49
SYNE3-203ENST00000554873 HES1Q14469 280 aa11.98□□□□□ -0.49
SYNE3-203ENST00000554873 SLC25A29Q8N8R3 303 aa11.98□□□□□ -0.49
SYNE3-203ENST00000554873 SMIM2Q9BVW6 85 aa11.98□□□□□ -0.49
SYNE3-203ENST00000554873 TRAV25A0A0B4J276 109 aa11.97□□□□□ -0.49
SYNE3-203ENST00000554873 TRBV10-2A0A0K0K1G8 114 aa11.97□□□□□ -0.49
SYNE3-203ENST00000554873 IGHV3-33P01772 117 aa11.97□□□□□ -0.49
SYNE3-203ENST00000554873 RPL7P18124 248 aaKnown RBP11.97□□□□□ -0.49
SYNE3-203ENST00000554873 ERCC8Q13216 396 aa11.97□□□□□ -0.49
SYNE3-203ENST00000554873 ZNF672Q499Z4 452 aaPredicted RBP11.97□□□□□ -0.49
SYNE3-203ENST00000554873 RNF5Q99942 180 aa11.97□□□□□ -0.49
SYNE3-203ENST00000554873 NDUFA7O95182 113 aa11.97□□□□□ -0.49
SYNE3-203ENST00000554873 IGFBPL1Q8WX77 278 aa11.97□□□□□ -0.49
SYNE3-203ENST00000554873 LOC107984640A0A0U1RRK4 108 aa11.96□□□□□ -0.49
SYNE3-203ENST00000554873 HERVK_113P61574 105 aa11.96□□□□□ -0.49
SYNE3-203ENST00000554873 ZNF56Q15929 161 aa11.96□□□□□ -0.49
SYNE3-203ENST00000554873 Q6ZS46 218 aa11.96□□□□□ -0.49
SYNE3-203ENST00000554873 FAM240AA0A1B0GVK7 77 aa11.96□□□□□ -0.49
SYNE3-203ENST00000554873 J3KT08 172 aa11.96□□□□□ -0.49
SYNE3-203ENST00000554873 C9orf153Q5TBE3 101 aa11.96□□□□□ -0.49
SYNE3-203ENST00000554873 ARHGAP32A7KAX9 2087 aa11.96□□□□□ -0.5
SYNE3-203ENST00000554873 NPFFO15130 113 aa11.96□□□□□ -0.5
SYNE3-203ENST00000554873 GFRALQ6UXV0 394 aa11.96□□□□□ -0.5
SYNE3-203ENST00000554873 RIF1Q5UIP0 2472 aaKnown RBP11.95□□□□□ -0.5
SYNE3-203ENST00000554873 C3orf22Q8N5N4 141 aa11.95□□□□□ -0.5
SYNE3-203ENST00000554873 TMEM101Q96IK0 257 aa11.95□□□□□ -0.5
SYNE3-203ENST00000554873 A0A1B0GX51 115 aa11.94□□□□□ -0.5
SYNE3-203ENST00000554873 FAM19A5Q7Z5A7 132 aaPredicted RBP11.94□□□□□ -0.5
SYNE3-203ENST00000554873 TMEM263Q8WUH6 116 aaKnown RBP11.94□□□□□ -0.5
SYNE3-203ENST00000554873 B9A039 149 aa11.94□□□□□ -0.5
SYNE3-203ENST00000554873 A0A0B4J2C4 111 aa11.93□□□□□ -0.5
SYNE3-203ENST00000554873 Q8NA96 180 aa11.93□□□□□ -0.5
SYNE3-203ENST00000554873 A4D1N5 150 aa11.93□□□□□ -0.5
SYNE3-203ENST00000554873 NBR2O15453 112 aa11.93□□□□□ -0.5
SYNE3-203ENST00000554873 TCF15Q12870 199 aa11.93□□□□□ -0.5
SYNE3-203ENST00000554873 EBI3Q14213 229 aa11.93□□□□□ -0.5
SYNE3-203ENST00000554873 SPANXDQ9BXN6 97 aa11.93□□□□□ -0.5
SYNE3-203ENST00000554873 ABCA4P78363 2273 aa11.93□□□□□ -0.5
SYNE3-203ENST00000554873 CSMD1Q96PZ7 3565 aa11.93□□□□□ -0.5
SYNE3-203ENST00000554873 OOSP1A8MZH6 123 aa11.92□□□□□ -0.5
SYNE3-203ENST00000554873 IGHV4-39P01824 125 aa11.92□□□□□ -0.5
SYNE3-203ENST00000554873 EMP1P54849 157 aa11.92□□□□□ -0.5
SYNE3-203ENST00000554873 HERVK_113P63121 156 aa11.92□□□□□ -0.5
SYNE3-203ENST00000554873 PAPPA-AS1Q5QFB9 102 aa11.92□□□□□ -0.5
SYNE3-203ENST00000554873 ZNF292O60281 2723 aa11.92□□□□□ -0.5
SYNE3-203ENST00000554873 FAM236AA0A1B0GUQ0 79 aa11.92□□□□□ -0.5
SYNE3-203ENST00000554873 FAM236BA0A1B0GV22 79 aa11.92□□□□□ -0.5
SYNE3-203ENST00000554873 H7C2G1 150 aa11.92□□□□□ -0.5
SYNE3-203ENST00000554873 C2orf66Q6UXQ4 117 aa11.92□□□□□ -0.5
SYNE3-203ENST00000554873 FANCD2OSQ96PS1 177 aa11.92□□□□□ -0.5
SYNE3-203ENST00000554873 IMUPQ9GZP8 106 aa11.92□□□□□ -0.5
SYNE3-203ENST00000554873 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.92□□□□□ -0.5
SYNE3-203ENST00000554873 ELANEP08246 267 aa11.92□□□□□ -0.5
SYNE3-203ENST00000554873 C2orf82Q6UX34 121 aa11.92□□□□□ -0.5
SYNE3-203ENST00000554873 CFHR4Q92496 578 aa11.92□□□□□ -0.5
SYNE3-203ENST00000554873 UBTD1Q9HAC8 227 aa11.92□□□□□ -0.5
SYNE3-203ENST00000554873 F8W735 103 aaPredicted RBP11.91□□□□□ -0.5
SYNE3-203ENST00000554873 UQCRQO14949 82 aa11.91□□□□□ -0.5
SYNE3-203ENST00000554873 EIF4EBP3O60516 100 aaPredicted RBP11.91□□□□□ -0.5
SYNE3-203ENST00000554873 CD3EP07766 207 aa11.91□□□□□ -0.5
SYNE3-203ENST00000554873 POM121L12Q8N7R1 296 aa11.91□□□□□ -0.5
SYNE3-203ENST00000554873 C11orf86A6NJI1 115 aa11.91□□□□□ -0.5
SYNE3-203ENST00000554873 DPM3Q9P2X0 92 aa11.91□□□□□ -0.5
SYNE3-203ENST00000554873 TRGV11A0A075B6L2 103 aa11.9□□□□□ -0.5
SYNE3-203ENST00000554873 IGKV3D-20A0A0C4DH25 116 aa11.9□□□□□ -0.5
SYNE3-203ENST00000554873 MFAP4P55083 255 aa11.9□□□□□ -0.5
SYNE3-203ENST00000554873 Q1RN00 199 aa11.9□□□□□ -0.5
SYNE3-203ENST00000554873 NPBQ8NG41 125 aa11.9□□□□□ -0.5
SYNE3-203ENST00000554873 IGLV11-55A0A075B6I3 123 aa11.9□□□□□ -0.5
SYNE3-203ENST00000554873 SUMO2P61956 95 aaKnown RBP11.9□□□□□ -0.5
SYNE3-203ENST00000554873 OR13C6PQ8NH95 151 aa11.9□□□□□ -0.5
SYNE3-203ENST00000554873 LINC00526Q96FQ7 95 aa11.9□□□□□ -0.5
SYNE3-203ENST00000554873 SLC50A1Q9BRV3 221 aa11.9□□□□□ -0.5
SYNE3-203ENST00000554873 LRBAP50851 2863 aa11.89□□□□□ -0.51
SYNE3-203ENST00000554873 PMVKQ15126 192 aa11.89□□□□□ -0.51
SYNE3-203ENST00000554873 DCHS2Q6V1P9 2916 aa11.89□□□□□ -0.51
SYNE3-203ENST00000554873 LY6G5BQ8NDX9 201 aa11.89□□□□□ -0.51
SYNE3-203ENST00000554873 SPANXCQ9NY87 97 aa11.89□□□□□ -0.51
SYNE3-203ENST00000554873 WNK2Q9Y3S1 2297 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms