RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 PGPEP1LA6NFU8 196 aa14.05□□□□□ -0.16
FOXA1-203ENST00000553751 KRBOX1C9JBD0 128 aa14.05□□□□□ -0.16
FOXA1-203ENST00000553751 CFAP126Q5VTH2 177 aa14.05□□□□□ -0.16
FOXA1-203ENST00000553751 TEX46H3BTG2 121 aa14.04□□□□□ -0.16
FOXA1-203ENST00000553751 M0R036 132 aa14.04□□□□□ -0.16
FOXA1-203ENST00000553751 RS1O15537 224 aa14.04□□□□□ -0.16
FOXA1-203ENST00000553751 S100A4P26447 101 aaKnown RBP14.04□□□□□ -0.16
FOXA1-203ENST00000553751 MRPL23Q16540 153 aaKnown RBP14.04□□□□□ -0.16
FOXA1-203ENST00000553751 LINC01559Q495D7 138 aa14.04□□□□□ -0.16
FOXA1-203ENST00000553751 DNLZQ5SXM8 178 aa14.04□□□□□ -0.16
FOXA1-203ENST00000553751 LINC00336Q6ZUF6 198 aa14.04□□□□□ -0.16
FOXA1-203ENST00000553751 ZNF575Q86XF7 245 aa14.04□□□□□ -0.16
FOXA1-203ENST00000553751 C11orf52Q96A22 123 aa14.04□□□□□ -0.16
FOXA1-203ENST00000553751 MLST8Q9BVC4 326 aa14.04□□□□□ -0.16
FOXA1-203ENST00000553751 Q9H8V8 135 aa14.04□□□□□ -0.16
FOXA1-203ENST00000553751 K7EQD1 137 aa14.03□□□□□ -0.16
FOXA1-203ENST00000553751 GATA1P15976 413 aaPredicted RBP14.03□□□□□ -0.16
FOXA1-203ENST00000553751 IL36BQ9NZH7 164 aa14.03□□□□□ -0.16
FOXA1-203ENST00000553751 H3BVH4 76 aa14.02□□□□□ -0.17
FOXA1-203ENST00000553751 GYPEP15421 78 aa14.02□□□□□ -0.17
FOXA1-203ENST00000553751 RPL35P42766 123 aaKnown RBP14.02□□□□□ -0.17
FOXA1-203ENST00000553751 BAGE2Q86Y30 109 aa14.02□□□□□ -0.17
FOXA1-203ENST00000553751 TXNDC17Q9BRA2 123 aa14.02□□□□□ -0.17
FOXA1-203ENST00000553751 DERL1Q9BUN8 251 aa14.02□□□□□ -0.17
FOXA1-203ENST00000553751 GRIFINA4D1Z8 144 aa14.01□□□□□ -0.17
FOXA1-203ENST00000553751 PIK3CD-AS1Q5SR53 167 aa14.01□□□□□ -0.17
FOXA1-203ENST00000553751 PCNPQ8WW12 178 aaKnown RBP14.01□□□□□ -0.17
FOXA1-203ENST00000553751 TMSB15BA0A087X1C1 80 aa14□□□□□ -0.17
FOXA1-203ENST00000553751 CIDEAO60543 219 aa14□□□□□ -0.17
FOXA1-203ENST00000553751 IFNA1P01562 189 aa14□□□□□ -0.17
FOXA1-203ENST00000553751 BCL2P10415 239 aa14□□□□□ -0.17
FOXA1-203ENST00000553751 SRIP30626 198 aa14□□□□□ -0.17
FOXA1-203ENST00000553751 NKX2-5P52952 324 aaPredicted RBP14□□□□□ -0.17
FOXA1-203ENST00000553751 MEF2BQ02080 365 aaPredicted RBP14□□□□□ -0.17
FOXA1-203ENST00000553751 C1orf134Q5TEV5 83 aa14□□□□□ -0.17
FOXA1-203ENST00000553751 ALKAL2Q6UX46 152 aa14□□□□□ -0.17
FOXA1-203ENST00000553751 NEGR1Q7Z3B1 354 aa14□□□□□ -0.17
FOXA1-203ENST00000553751 KRTAP1-5Q9BYS1 174 aa14□□□□□ -0.17
FOXA1-203ENST00000553751 IGHV3-73A0A0B4J1V6 119 aa13.99□□□□□ -0.17
FOXA1-203ENST00000553751 LOC100131303A0A0U1RQF7 123 aa13.99□□□□□ -0.17
FOXA1-203ENST00000553751 ARMS2P0C7Q2 107 aa13.99□□□□□ -0.17
FOXA1-203ENST00000553751 LYPD5Q6UWN5 251 aa13.99□□□□□ -0.17
FOXA1-203ENST00000553751 SCRT2Q9NQ03 307 aa13.99□□□□□ -0.17
FOXA1-203ENST00000553751 PRSS29PA6NIE9 313 aa13.98□□□□□ -0.17
FOXA1-203ENST00000553751 SOHLH1Q5JUK2 328 aa13.98□□□□□ -0.17
FOXA1-203ENST00000553751 SLC25A29Q8N8R3 303 aa13.98□□□□□ -0.17
FOXA1-203ENST00000553751 PARLQ9H300 379 aa13.98□□□□□ -0.17
FOXA1-203ENST00000553751 A0A1B0GVY2 172 aa13.97□□□□□ -0.17
FOXA1-203ENST00000553751 A8MWV9 139 aa13.97□□□□□ -0.17
FOXA1-203ENST00000553751 PDE6DO43924 150 aa13.97□□□□□ -0.17
FOXA1-203ENST00000553751 NXPH4O95158 308 aa13.97□□□□□ -0.17
FOXA1-203ENST00000553751 TTC32Q5I0X7 151 aa13.97□□□□□ -0.17
FOXA1-203ENST00000553751 TRBV6-4A0A1B0GX49 114 aa13.96□□□□□ -0.17
FOXA1-203ENST00000553751 RPL19P84098 196 aaKnown RBP13.96□□□□□ -0.17
FOXA1-203ENST00000553751 CENPWQ5EE01 88 aa13.96□□□□□ -0.17
FOXA1-203ENST00000553751 DMRTA1Q5VZB9 504 aa13.96□□□□□ -0.17
FOXA1-203ENST00000553751 PRR27Q6MZM9 219 aa13.96□□□□□ -0.17
FOXA1-203ENST00000553751 UFSP1Q6NVU6 142 aa13.96□□□□□ -0.17
FOXA1-203ENST00000553751 ZFP2Q6ZN57 461 aa13.96□□□□□ -0.17
FOXA1-203ENST00000553751 C6orf223Q8N319 242 aa13.96□□□□□ -0.17
FOXA1-203ENST00000553751 JPT2Q9H910 190 aa13.96□□□□□ -0.17
FOXA1-203ENST00000553751 BOLA1Q9Y3E2 137 aa13.96□□□□□ -0.17
FOXA1-203ENST00000553751 PKD1P98161 4303 aa13.95□□□□□ -0.18
FOXA1-203ENST00000553751 A0A1W2PPQ1 181 aa13.95□□□□□ -0.18
FOXA1-203ENST00000553751 IGLV2-8P01709 118 aa13.95□□□□□ -0.18
FOXA1-203ENST00000553751 MGST1P10620 155 aaKnown RBP13.95□□□□□ -0.18
FOXA1-203ENST00000553751 RHOHQ15669 191 aa13.95□□□□□ -0.18
FOXA1-203ENST00000553751 SYT8Q8NBV8 401 aa13.95□□□□□ -0.18
FOXA1-203ENST00000553751 VAX2Q9UIW0 290 aa13.95□□□□□ -0.18
FOXA1-203ENST00000553751 PHLDA3Q9Y5J5 127 aa13.95□□□□□ -0.18
FOXA1-203ENST00000553751 SIVA1O15304 175 aa13.94□□□□□ -0.18
FOXA1-203ENST00000553751 CXCL1P09341 107 aa13.94□□□□□ -0.18
FOXA1-203ENST00000553751 MED14OSP0DP75 135 aa13.94□□□□□ -0.18
FOXA1-203ENST00000553751 Q6ZSN1 163 aa13.94□□□□□ -0.18
FOXA1-203ENST00000553751 PRADC1Q9BSG0 188 aa13.94□□□□□ -0.18
FOXA1-203ENST00000553751 SAMD10Q9BYL1 202 aa13.94□□□□□ -0.18
FOXA1-203ENST00000553751 PKHD1P08F94 4074 aa13.93□□□□□ -0.18
FOXA1-203ENST00000553751 RAB19A4D1S5 217 aa13.93□□□□□ -0.18
FOXA1-203ENST00000553751 TAGLN2P37802 199 aaKnown RBP13.93□□□□□ -0.18
FOXA1-203ENST00000553751 BLOC1S1P78537 153 aa13.93□□□□□ -0.18
FOXA1-203ENST00000553751 SH2D6Q7Z4S9 175 aa13.93□□□□□ -0.18
FOXA1-203ENST00000553751 MED9Q9NWA0 146 aa13.93□□□□□ -0.18
FOXA1-203ENST00000553751 TRBV20OR9-2A0A075B6H5 130 aa13.92□□□□□ -0.18
FOXA1-203ENST00000553751 M0R381 172 aa13.92□□□□□ -0.18
FOXA1-203ENST00000553751 GNG4P50150 75 aa13.92□□□□□ -0.18
FOXA1-203ENST00000553751 ZFP82Q8N141 532 aa13.92□□□□□ -0.18
FOXA1-203ENST00000553751 LYPD6BQ8NI32 183 aa13.92□□□□□ -0.18
FOXA1-203ENST00000553751 SMIM12Q96EX1 92 aa13.92□□□□□ -0.18
FOXA1-203ENST00000553751 SFRP2Q96HF1 295 aa13.92□□□□□ -0.18
FOXA1-203ENST00000553751 RHODO00212 210 aa13.9□□□□□ -0.18
FOXA1-203ENST00000553751 TIRAPP58753 221 aa13.9□□□□□ -0.18
FOXA1-203ENST00000553751 WFDC10BQ8IUB3 73 aa13.9□□□□□ -0.18
FOXA1-203ENST00000553751 DNAH11Q96DT5 4516 aa13.9□□□□□ -0.18
FOXA1-203ENST00000553751 SNAI2O43623 268 aa13.89□□□□□ -0.19
FOXA1-203ENST00000553751 FAM74A4Q5TZK3 123 aa13.89□□□□□ -0.19
FOXA1-203ENST00000553751 OR10AG1Q8NH19 301 aa13.89□□□□□ -0.19
FOXA1-203ENST00000553751 SSBP4Q9BWG4 385 aaPredicted RBP13.89□□□□□ -0.19
FOXA1-203ENST00000553751 A0A087WWL8 130 aa13.88□□□□□ -0.19
FOXA1-203ENST00000553751 C19orf71A6NCJ1 209 aa13.88□□□□□ -0.19
FOXA1-203ENST00000553751 CRYGDP07320 174 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms