RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 GRIFINA4D1Z8 144 aa12.35□□□□□ -0.43
SHMT2-206ENST00000553529 PFDN1O60925 122 aa12.35□□□□□ -0.43
SHMT2-206ENST00000553529 SLAQ13239 276 aa12.35□□□□□ -0.43
SHMT2-206ENST00000553529 PCNPQ8WW12 178 aaKnown RBP12.35□□□□□ -0.43
SHMT2-206ENST00000553529 SAMD10Q9BYL1 202 aa12.35□□□□□ -0.43
SHMT2-206ENST00000553529 TMSB15BA0A087X1C1 80 aa12.34□□□□□ -0.43
SHMT2-206ENST00000553529 FBLL1A6NHQ2 334 aaKnown RBP12.34□□□□□ -0.43
SHMT2-206ENST00000553529 ZFP69Q49AA0 526 aa12.34□□□□□ -0.43
SHMT2-206ENST00000553529 H3BVH4 76 aa12.33□□□□□ -0.44
SHMT2-206ENST00000553529 PAGE4O60829 102 aa12.33□□□□□ -0.44
SHMT2-206ENST00000553529 SH2D1AO60880 128 aa12.33□□□□□ -0.44
SHMT2-206ENST00000553529 CST9LP1Q5W188 147 aa12.33□□□□□ -0.44
SHMT2-206ENST00000553529 FAM213BQ8TBF2 198 aa12.33□□□□□ -0.44
SHMT2-206ENST00000553529 ORM1P02763 201 aa12.32□□□□□ -0.44
SHMT2-206ENST00000553529 SAPCD1Q5SSQ6 148 aa12.32□□□□□ -0.44
SHMT2-206ENST00000553529 ZNF471Q9BX82 626 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-206ENST00000553529 BCL2L11O43521 198 aa12.31□□□□□ -0.44
SHMT2-206ENST00000553529 ZNF345Q14585 488 aa12.31□□□□□ -0.44
SHMT2-206ENST00000553529 AKAP14Q86UN6 197 aa12.31□□□□□ -0.44
SHMT2-206ENST00000553529 PARLQ9H300 379 aa12.31□□□□□ -0.44
SHMT2-206ENST00000553529 LY96Q9Y6Y9 160 aa12.31□□□□□ -0.44
SHMT2-206ENST00000553529 SCO2A0A1W2PP80 73 aa12.3□□□□□ -0.44
SHMT2-206ENST00000553529 B4DEV8 164 aa12.3□□□□□ -0.44
SHMT2-206ENST00000553529 KRBOX1C9JBD0 128 aa12.3□□□□□ -0.44
SHMT2-206ENST00000553529 DMRTA1Q5VZB9 504 aa12.3□□□□□ -0.44
SHMT2-206ENST00000553529 C14orf178Q8N769 122 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-206ENST00000553529 SFT2D1Q8WV19 159 aa12.3□□□□□ -0.44
SHMT2-206ENST00000553529 FABP5P3A8MUU1 101 aa12.29□□□□□ -0.44
SHMT2-206ENST00000553529 PPT1P50897 306 aa12.29□□□□□ -0.44
SHMT2-206ENST00000553529 CCL20P78556 96 aa12.29□□□□□ -0.44
SHMT2-206ENST00000553529 RPL19P84098 196 aaKnown RBP12.29□□□□□ -0.44
SHMT2-206ENST00000553529 UFSP1Q6NVU6 142 aa12.29□□□□□ -0.44
SHMT2-206ENST00000553529 HIST1H2BAQ96A08 127 aa12.29□□□□□ -0.44
SHMT2-206ENST00000553529 TXNDC17Q9BRA2 123 aa12.29□□□□□ -0.44
SHMT2-206ENST00000553529 GAGE12JA6NER3 117 aa12.28□□□□□ -0.44
SHMT2-206ENST00000553529 LTAP01374 205 aa12.28□□□□□ -0.44
SHMT2-206ENST00000553529 IGHV3-30P01768 117 aa12.28□□□□□ -0.44
SHMT2-206ENST00000553529 IGHV3-33P01772 117 aa12.28□□□□□ -0.44
SHMT2-206ENST00000553529 ARMS2P0C7Q2 107 aa12.28□□□□□ -0.44
SHMT2-206ENST00000553529 IGHV3-30-3P0DP02 117 aa12.28□□□□□ -0.44
SHMT2-206ENST00000553529 IGHV3-30-5P0DP03 117 aa12.28□□□□□ -0.44
SHMT2-206ENST00000553529 BTF3P20290 206 aaKnown RBP12.28□□□□□ -0.44
SHMT2-206ENST00000553529 S100A4P26447 101 aaKnown RBP12.28□□□□□ -0.44
SHMT2-206ENST00000553529 ASIPP42127 132 aa12.28□□□□□ -0.44
SHMT2-206ENST00000553529 GAGE1Q13065 139 aa12.28□□□□□ -0.44
SHMT2-206ENST00000553529 GAGE4Q13068 117 aa12.28□□□□□ -0.44
SHMT2-206ENST00000553529 GAGE5Q13069 117 aa12.28□□□□□ -0.44
SHMT2-206ENST00000553529 LGALSLQ3ZCW2 172 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-206ENST00000553529 GAGE13Q4V321 117 aa12.28□□□□□ -0.44
SHMT2-206ENST00000553529 TMUB2Q71RG4 321 aa12.28□□□□□ -0.44
SHMT2-206ENST00000553529 HMSDA8MTL9 139 aa12.27□□□□□ -0.45
SHMT2-206ENST00000553529 CRYGDP07320 174 aa12.27□□□□□ -0.45
SHMT2-206ENST00000553529 SEC11BP0C7V7 166 aa12.27□□□□□ -0.45
SHMT2-206ENST00000553529 AKR1C3P42330 323 aa12.27□□□□□ -0.45
SHMT2-206ENST00000553529 UBE2G1P62253 170 aa12.27□□□□□ -0.45
SHMT2-206ENST00000553529 MBD3L1Q8WWY6 194 aa12.27□□□□□ -0.45
SHMT2-206ENST00000553529 MSRB1Q9NZV6 116 aa12.27□□□□□ -0.45
SHMT2-206ENST00000553529 A0A087WWL8 130 aa12.26□□□□□ -0.45
SHMT2-206ENST00000553529 TRBV6-4A0A1B0GX49 114 aa12.26□□□□□ -0.45
SHMT2-206ENST00000553529 KANTRA0A1W2PQU2 76 aa12.26□□□□□ -0.45
SHMT2-206ENST00000553529 RHOHQ15669 191 aa12.26□□□□□ -0.45
SHMT2-206ENST00000553529 ZNF674Q2M3X9 581 aa12.26□□□□□ -0.45
SHMT2-206ENST00000553529 FMC1Q96HJ9 113 aa12.26□□□□□ -0.45
SHMT2-206ENST00000553529 A0A087WTM6 91 aa12.25□□□□□ -0.45
SHMT2-206ENST00000553529 MUC21A0A0G2JKD1 596 aa12.25□□□□□ -0.45
SHMT2-206ENST00000553529 MUC21A0A140T8X8 626 aa12.25□□□□□ -0.45
SHMT2-206ENST00000553529 LINC00694P0DN24 101 aa12.25□□□□□ -0.45
SHMT2-206ENST00000553529 FAM74A4Q5TZK3 123 aa12.25□□□□□ -0.45
SHMT2-206ENST00000553529 COX8CQ7Z4L0 72 aa12.25□□□□□ -0.45
SHMT2-206ENST00000553529 MAPKAPK5-AS1Q8N8E1 139 aa12.25□□□□□ -0.45
SHMT2-206ENST00000553529 PTH2Q96A98 100 aa12.25□□□□□ -0.45
SHMT2-206ENST00000553529 PRADC1Q9BSG0 188 aa12.25□□□□□ -0.45
SHMT2-206ENST00000553529 DERL1Q9BUN8 251 aa12.25□□□□□ -0.45
SHMT2-206ENST00000553529 IL36BQ9NZH7 164 aa12.25□□□□□ -0.45
SHMT2-206ENST00000553529 A0A0D9SG52 128 aa12.24□□□□□ -0.45
SHMT2-206ENST00000553529 M0R381 172 aa12.24□□□□□ -0.45
SHMT2-206ENST00000553529 OR10J3Q5JRS4 329 aa12.24□□□□□ -0.45
SHMT2-206ENST00000553529 FAM162BQ5T6X4 162 aa12.24□□□□□ -0.45
SHMT2-206ENST00000553529 STOML3Q8TAV4 291 aa12.24□□□□□ -0.45
SHMT2-206ENST00000553529 Q9HAA7 133 aa12.24□□□□□ -0.45
SHMT2-206ENST00000553529 IGHV3-38A0A0C4DH36 116 aa12.23□□□□□ -0.45
SHMT2-206ENST00000553529 CDK2AP2O75956 126 aa12.23□□□□□ -0.45
SHMT2-206ENST00000553529 EVI2AP22794 236 aa12.23□□□□□ -0.45
SHMT2-206ENST00000553529 LINC01559Q495D7 138 aa12.23□□□□□ -0.45
SHMT2-206ENST00000553529 ATP6V0E2Q8NHE4 81 aa12.23□□□□□ -0.45
SHMT2-206ENST00000553529 DNAJC30Q96LL9 226 aa12.23□□□□□ -0.45
SHMT2-206ENST00000553529 NKX6-2Q9C056 277 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-206ENST00000553529 ZFP30Q9Y2G7 519 aa12.23□□□□□ -0.45
SHMT2-206ENST00000553529 TRBV6-1A0A0K0K1D8 114 aa12.22□□□□□ -0.45
SHMT2-206ENST00000553529 H2AFB1P0C5Y9 115 aa12.22□□□□□ -0.45
SHMT2-206ENST00000553529 MGST1P10620 155 aaKnown RBP12.22□□□□□ -0.45
SHMT2-206ENST00000553529 KRTAP10-1P60331 282 aa12.22□□□□□ -0.45
SHMT2-206ENST00000553529 HAMPP81172 84 aa12.22□□□□□ -0.45
SHMT2-206ENST00000553529 SCRT2Q9NQ03 307 aa12.22□□□□□ -0.45
SHMT2-206ENST00000553529 A8MWV9 139 aa12.21□□□□□ -0.45
SHMT2-206ENST00000553529 ERVFC1-1P60608 527 aa12.21□□□□□ -0.45
SHMT2-206ENST00000553529 SSTP61278 116 aa12.21□□□□□ -0.45
SHMT2-206ENST00000553529 DNLZQ5SXM8 178 aa12.21□□□□□ -0.45
SHMT2-206ENST00000553529 PRR27Q6MZM9 219 aa12.21□□□□□ -0.45
SHMT2-206ENST00000553529 UMAD1C9J7I0 102 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms