RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 Q9H3A6 140 aa3.34□□□□□ -1.87
ATXN3-220ENST00000553491 TENM2Q9NT68 2774 aa3.34□□□□□ -1.88
ATXN3-220ENST00000553491 IGHV3-38A0A0C4DH36 116 aa3.33□□□□□ -1.88
ATXN3-220ENST00000553491 RAB19A4D1S5 217 aa3.33□□□□□ -1.88
ATXN3-220ENST00000553491 RNF222A6NCQ9 220 aa3.33□□□□□ -1.88
ATXN3-220ENST00000553491 G3V3Q6 166 aa3.33□□□□□ -1.88
ATXN3-220ENST00000553491 K7EQM0 130 aa3.33□□□□□ -1.88
ATXN3-220ENST00000553491 LY6G6CO95867 125 aa3.33□□□□□ -1.88
ATXN3-220ENST00000553491 CXorf1O96002 111 aa3.33□□□□□ -1.88
ATXN3-220ENST00000553491 NMBP08949 121 aa3.33□□□□□ -1.88
ATXN3-220ENST00000553491 SPART-AS1P0CW21 52 aa3.33□□□□□ -1.88
ATXN3-220ENST00000553491 AZU1P20160 251 aa3.33□□□□□ -1.88
ATXN3-220ENST00000553491 GCHFRP30047 84 aa3.33□□□□□ -1.88
ATXN3-220ENST00000553491 DAD1P61803 113 aa3.33□□□□□ -1.88
ATXN3-220ENST00000553491 GNG5P63218 68 aa3.33□□□□□ -1.88
ATXN3-220ENST00000553491 EIF5AP63241 154 aaKnown RBP3.33□□□□□ -1.88
ATXN3-220ENST00000553491 ZC2HC1BQ5TFG8 222 aa3.33□□□□□ -1.88
ATXN3-220ENST00000553491 FAM222AQ5U5X8 452 aa3.33□□□□□ -1.88
ATXN3-220ENST00000553491 CEMP1Q6PRD7 247 aaPredicted RBP3.33□□□□□ -1.88
ATXN3-220ENST00000553491 AMTNQ6UX39 209 aa3.33□□□□□ -1.88
ATXN3-220ENST00000553491 GOLT1AQ6ZVE7 132 aa3.33□□□□□ -1.88
ATXN3-220ENST00000553491 KCNRGQ8N5I3 272 aa3.33□□□□□ -1.88
ATXN3-220ENST00000553491 STOML3Q8TAV4 291 aa3.33□□□□□ -1.88
ATXN3-220ENST00000553491 FAM213BQ8TBF2 198 aa3.33□□□□□ -1.88
ATXN3-220ENST00000553491 RXFP4Q8TDU9 374 aa3.33□□□□□ -1.88
ATXN3-220ENST00000553491 SFT2D1Q8WV19 159 aa3.33□□□□□ -1.88
ATXN3-220ENST00000553491 C11orf52Q96A22 123 aa3.33□□□□□ -1.88
ATXN3-220ENST00000553491 SPXQ9BT56 116 aa3.33□□□□□ -1.88
ATXN3-220ENST00000553491 PSMG3Q9BT73 122 aaPredicted RBP3.33□□□□□ -1.88
ATXN3-220ENST00000553491 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
ATXN3-220ENST00000553491 OTORQ9NRC9 128 aa3.33□□□□□ -1.88
ATXN3-220ENST00000553491 NAGKQ9UJ70 344 aa3.33□□□□□ -1.88
ATXN3-220ENST00000553491 YTHDF2Q9Y5A9 579 aaKnown RBP3.33□□□□□ -1.88
ATXN3-220ENST00000553491 MUC4Q99102 2169 aa3.33□□□□□ -1.88
ATXN3-220ENST00000553491 DEFB131BA0A096LNP1 70 aa3.32□□□□□ -1.88
ATXN3-220ENST00000553491 CTXND1A0A1B0GTU2 59 aa3.32□□□□□ -1.88
ATXN3-220ENST00000553491 C7orf71A4D174 169 aa3.32□□□□□ -1.88
ATXN3-220ENST00000553491 TMEM189A5PLL7 270 aa3.32□□□□□ -1.88
ATXN3-220ENST00000553491 NUPR2A6NF83 97 aa3.32□□□□□ -1.88
ATXN3-220ENST00000553491 ZNF705EA8MWA4 302 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-220ENST00000553491 ZNF253O75346 499 aa3.32□□□□□ -1.88
ATXN3-220ENST00000553491 ZNF138P52744 262 aa3.32□□□□□ -1.88
ATXN3-220ENST00000553491 KRTAP10-12P60413 245 aa3.32□□□□□ -1.88
ATXN3-220ENST00000553491 RIGQ13278 110 aa3.32□□□□□ -1.88
ATXN3-220ENST00000553491 BTN1A1Q13410 526 aa3.32□□□□□ -1.88
ATXN3-220ENST00000553491 OR5I1Q13606 314 aa3.32□□□□□ -1.88
ATXN3-220ENST00000553491 PDE6HQ13956 83 aa3.32□□□□□ -1.88
ATXN3-220ENST00000553491 MUC21Q5SSG8 566 aa3.32□□□□□ -1.88
ATXN3-220ENST00000553491 EIF5AL1Q6IS14 154 aaKnown RBP3.32□□□□□ -1.88
ATXN3-220ENST00000553491 ZNF705AQ6ZN79 300 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-220ENST00000553491 SSX7Q7RTT5 188 aa3.32□□□□□ -1.88
ATXN3-220ENST00000553491 PRNTQ86SH4 94 aa3.32□□□□□ -1.88
ATXN3-220ENST00000553491 LYPD1Q8N2G4 141 aa3.32□□□□□ -1.88
ATXN3-220ENST00000553491 TMEM256Q8N2U0 113 aa3.32□□□□□ -1.88
ATXN3-220ENST00000553491 Q8NAQ8 132 aa3.32□□□□□ -1.88
ATXN3-220ENST00000553491 Q8TAT8 98 aa3.32□□□□□ -1.88
ATXN3-220ENST00000553491 LINC00479Q96M42 142 aa3.32□□□□□ -1.88
ATXN3-220ENST00000553491 PARLQ9H300 379 aa3.32□□□□□ -1.88
ATXN3-220ENST00000553491 NOP10Q9NPE3 64 aaKnown RBP3.32□□□□□ -1.88
ATXN3-220ENST00000553491 CYTL1Q9NRR1 136 aa3.32□□□□□ -1.88
ATXN3-220ENST00000553491 TMEM167BQ9NRX6 74 aa3.32□□□□□ -1.88
ATXN3-220ENST00000553491 CELA1Q9UNI1 258 aa3.32□□□□□ -1.88
ATXN3-220ENST00000553491 PRKDCP78527 4128 aaKnown RBP3.32□□□□□ -1.88
ATXN3-220ENST00000553491 DNAH3Q8TD57 4116 aa3.32□□□□□ -1.88
ATXN3-220ENST00000553491 TRAV8-1A0A0A6YYK1 113 aa3.31□□□□□ -1.88
ATXN3-220ENST00000553491 TRAV10A0A0B4J240 114 aa3.31□□□□□ -1.88
ATXN3-220ENST00000553491 MAP1LC3B2A6NCE7 125 aa3.31□□□□□ -1.88
ATXN3-220ENST00000553491 C11orf94C9JXX5 98 aa3.31□□□□□ -1.88
ATXN3-220ENST00000553491 F5H768 121 aa3.31□□□□□ -1.88
ATXN3-220ENST00000553491 H7BYZ3 331 aa3.31□□□□□ -1.88
ATXN3-220ENST00000553491 CRXO43186 299 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-220ENST00000553491 BCL2L11O43521 198 aa3.31□□□□□ -1.88
ATXN3-220ENST00000553491 STAG3L2P0CL84 134 aa3.31□□□□□ -1.88
ATXN3-220ENST00000553491 STAG3L3P0CL85 134 aa3.31□□□□□ -1.88
ATXN3-220ENST00000553491 TPT1P13693 172 aaKnown RBP3.31□□□□□ -1.88
ATXN3-220ENST00000553491 TAS2R60P59551 318 aa3.31□□□□□ -1.88
ATXN3-220ENST00000553491 FLI1Q01543 452 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-220ENST00000553491 C12orf74Q32Q52 190 aa3.31□□□□□ -1.88
ATXN3-220ENST00000553491 C14orf177Q52M58 125 aa3.31□□□□□ -1.88
ATXN3-220ENST00000553491 SMUG1Q53HV7 270 aa3.31□□□□□ -1.88
ATXN3-220ENST00000553491 FAM159AQ6UWV7 190 aa3.31□□□□□ -1.88
ATXN3-220ENST00000553491 Q6ZQT7 251 aa3.31□□□□□ -1.88
ATXN3-220ENST00000553491 Q8NBF4 154 aa3.31□□□□□ -1.88
ATXN3-220ENST00000553491 NDFIP1Q9BT67 221 aa3.31□□□□□ -1.88
ATXN3-220ENST00000553491 MAP1LC3BQ9GZQ8 125 aa3.31□□□□□ -1.88
ATXN3-220ENST00000553491 C11orf68Q9H3H3 251 aaKnown RBP3.31□□□□□ -1.88
ATXN3-220ENST00000553491 TREM1Q9NP99 234 aa3.31□□□□□ -1.88
ATXN3-220ENST00000553491 ZNF492Q9P255 531 aa3.31□□□□□ -1.88
ATXN3-220ENST00000553491 TIMM8BQ9Y5J9 83 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-220ENST00000553491 TRGV2A0A075B6R0 118 aa3.3□□□□□ -1.88
ATXN3-220ENST00000553491 TRGV1A0A0A0MS02 117 aa3.3□□□□□ -1.88
ATXN3-220ENST00000553491 F6UZH7 168 aa3.3□□□□□ -1.88
ATXN3-220ENST00000553491 GNRH2O43555 120 aa3.3□□□□□ -1.88
ATXN3-220ENST00000553491 SEC11BP0C7V7 166 aa3.3□□□□□ -1.88
ATXN3-220ENST00000553491 PPT1P50897 306 aa3.3□□□□□ -1.88
ATXN3-220ENST00000553491 UBE2G1P62253 170 aa3.3□□□□□ -1.88
ATXN3-220ENST00000553491 ZNF726P1Q15940 193 aa3.3□□□□□ -1.88
ATXN3-220ENST00000553491 TMEM183BQ1AE95 376 aa3.3□□□□□ -1.88
ATXN3-220ENST00000553491 KRTAP7-1Q8IUC3 87 aa3.3□□□□□ -1.88
ATXN3-220ENST00000553491 UBE2DNLQ8IWF7 75 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms