RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 ODF1Q14990 250 aa9.76□□□□□ -0.85
SHMT2-205ENST00000553474 MYOZ3Q8TDC0 251 aa9.76□□□□□ -0.85
SHMT2-205ENST00000553474 TMEM158Q8WZ71 300 aa9.76□□□□□ -0.85
SHMT2-205ENST00000553474 ODF3Q96PU9 254 aa9.76□□□□□ -0.85
SHMT2-205ENST00000553474 SVEP1Q4LDE5 3571 aa9.76□□□□□ -0.85
SHMT2-205ENST00000553474 LINC01549A6NIU2 74 aa9.75□□□□□ -0.85
SHMT2-205ENST00000553474 PRSS1P07477 247 aa9.75□□□□□ -0.85
SHMT2-205ENST00000553474 HSD52Q0P140 79 aa9.75□□□□□ -0.85
SHMT2-205ENST00000553474 ORMDL2Q53FV1 153 aa9.75□□□□□ -0.85
SHMT2-205ENST00000553474 TMEM97Q5BJF2 176 aa9.75□□□□□ -0.85
SHMT2-205ENST00000553474 PHLDA3Q9Y5J5 127 aa9.75□□□□□ -0.85
SHMT2-205ENST00000553474 ACANP16112 2415 aa9.75□□□□□ -0.85
SHMT2-205ENST00000553474 A0A096LNT2 108 aa9.75□□□□□ -0.85
SHMT2-205ENST00000553474 TAX1BP3O14907 124 aa9.75□□□□□ -0.85
SHMT2-205ENST00000553474 GAS8-AS1O95177 125 aa9.75□□□□□ -0.85
SHMT2-205ENST00000553474 IGKCP01834 107 aa9.75□□□□□ -0.85
SHMT2-205ENST00000553474 SMIM17P0DL12 118 aa9.75□□□□□ -0.85
SHMT2-205ENST00000553474 RBX1P62877 108 aa9.75□□□□□ -0.85
SHMT2-205ENST00000553474 SMIM2Q9BVW6 85 aa9.75□□□□□ -0.85
SHMT2-205ENST00000553474 OTOGQ6ZRI0 2925 aa9.75□□□□□ -0.85
SHMT2-205ENST00000553474 A6NDN8 102 aa9.74□□□□□ -0.85
SHMT2-205ENST00000553474 KLLNB2CW77 178 aa9.74□□□□□ -0.85
SHMT2-205ENST00000553474 DPM2O94777 84 aa9.74□□□□□ -0.85
SHMT2-205ENST00000553474 NXPH4O95158 308 aa9.74□□□□□ -0.85
SHMT2-205ENST00000553474 AVPP01185 164 aa9.74□□□□□ -0.85
SHMT2-205ENST00000553474 FXYD7P58549 80 aa9.74□□□□□ -0.85
SHMT2-205ENST00000553474 TM4SF20Q53R12 229 aa9.74□□□□□ -0.85
SHMT2-205ENST00000553474 AP1S3Q96PC3 154 aa9.74□□□□□ -0.85
SHMT2-205ENST00000553474 HIGD1BQ9P298 99 aa9.74□□□□□ -0.85
SHMT2-205ENST00000553474 ZANQ9Y493 2812 aa9.74□□□□□ -0.85
SHMT2-205ENST00000553474 TLN2Q9Y4G6 2542 aa9.74□□□□□ -0.85
SHMT2-205ENST00000553474 GATA1P15976 413 aaPredicted RBP9.73□□□□□ -0.85
SHMT2-205ENST00000553474 ANXA2RQ3ZCQ2 193 aa9.73□□□□□ -0.85
SHMT2-205ENST00000553474 POM121L12Q8N7R1 296 aa9.73□□□□□ -0.85
SHMT2-205ENST00000553474 DCANP1Q8TF63 244 aa9.73□□□□□ -0.85
SHMT2-205ENST00000553474 C18orf15Q96N68 181 aa9.73□□□□□ -0.85
SHMT2-205ENST00000553474 DKK2Q9UBU2 259 aa9.73□□□□□ -0.85
SHMT2-205ENST00000553474 HHLA3Q9XRX5 114 aa9.73□□□□□ -0.85
SHMT2-205ENST00000553474 CELSR1Q9NYQ6 3014 aa9.73□□□□□ -0.85
SHMT2-205ENST00000553474 TRAV12-1A0A0B4J245 112 aa9.73□□□□□ -0.85
SHMT2-205ENST00000553474 CCL25O15444 150 aa9.73□□□□□ -0.85
SHMT2-205ENST00000553474 PLNP26678 52 aa9.73□□□□□ -0.85
SHMT2-205ENST00000553474 SUMO2P61956 95 aaKnown RBP9.73□□□□□ -0.85
SHMT2-205ENST00000553474 Q6ZS46 218 aa9.73□□□□□ -0.85
SHMT2-205ENST00000553474 TP73-AS1Q9UF72 201 aa9.73□□□□□ -0.85
SHMT2-205ENST00000553474 AKAP9Q99996 3911 aa9.72□□□□□ -0.85
SHMT2-205ENST00000553474 RNASE4P34096 147 aaKnown RBP9.72□□□□□ -0.85
SHMT2-205ENST00000553474 RPL32P62910 135 aaKnown RBP9.72□□□□□ -0.85
SHMT2-205ENST00000553474 A0A087WX48 190 aa9.71□□□□□ -0.85
SHMT2-205ENST00000553474 TMEM238C9JI98 176 aa9.71□□□□□ -0.85
SHMT2-205ENST00000553474 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.71□□□□□ -0.85
SHMT2-205ENST00000553474 LGALS9O00182 355 aa9.71□□□□□ -0.85
SHMT2-205ENST00000553474 ELANEP08246 267 aa9.71□□□□□ -0.85
SHMT2-205ENST00000553474 IGHV4-31P0DP07 118 aa9.71□□□□□ -0.85
SHMT2-205ENST00000553474 VAMP3Q15836 100 aa9.71□□□□□ -0.85
SHMT2-205ENST00000553474 DEFB112Q30KQ8 113 aa9.71□□□□□ -0.85
SHMT2-205ENST00000553474 ADAMTSL5Q6ZMM2 481 aa9.71□□□□□ -0.85
SHMT2-205ENST00000553474 CLUHP3Q96NS8 147 aa9.71□□□□□ -0.85
SHMT2-205ENST00000553474 CSPG4Q6UVK1 2322 aa9.71□□□□□ -0.86
SHMT2-205ENST00000553474 MAST4O15021 2626 aa9.71□□□□□ -0.86
SHMT2-205ENST00000553474 TRAV26-2A0A0B4J265 109 aa9.7□□□□□ -0.86
SHMT2-205ENST00000553474 RNASE3P12724 160 aaKnown RBP9.7□□□□□ -0.86
SHMT2-205ENST00000553474 NMUP48645 174 aa9.7□□□□□ -0.86
SHMT2-205ENST00000553474 SNRPD3P62318 126 aaKnown RBP9.7□□□□□ -0.86
SHMT2-205ENST00000553474 FAM159AQ6UWV7 190 aa9.7□□□□□ -0.86
SHMT2-205ENST00000553474 Q6ZQT7 251 aa9.7□□□□□ -0.86
SHMT2-205ENST00000553474 TOMM6Q96B49 74 aa9.7□□□□□ -0.86
SHMT2-205ENST00000553474 VPREB3Q9UKI3 123 aa9.7□□□□□ -0.86
SHMT2-205ENST00000553474 ZNF469Q96JG9 3925 aaPredicted RBP9.7□□□□□ -0.86
SHMT2-205ENST00000553474 IGHV4OR15-8A0A075B7B6 117 aa9.7□□□□□ -0.86
SHMT2-205ENST00000553474 A0A087WW49 117 aa9.7□□□□□ -0.86
SHMT2-205ENST00000553474 C7orf71A4D174 169 aa9.7□□□□□ -0.86
SHMT2-205ENST00000553474 H3BRM9 83 aa9.7□□□□□ -0.86
SHMT2-205ENST00000553474 TGFAP01135 160 aa9.7□□□□□ -0.86
SHMT2-205ENST00000553474 IGHV4-59P01825 116 aa9.7□□□□□ -0.86
SHMT2-205ENST00000553474 OR4C5Q8NGB2 326 aa9.7□□□□□ -0.86
SHMT2-205ENST00000553474 RASL10AQ92737 203 aa9.7□□□□□ -0.86
SHMT2-205ENST00000553474 K7EP13 123 aa9.69□□□□□ -0.86
SHMT2-205ENST00000553474 FSHBP01225 129 aa9.69□□□□□ -0.86
SHMT2-205ENST00000553474 F6UB75 175 aa9.68□□□□□ -0.86
SHMT2-205ENST00000553474 LGALS1P09382 135 aaKnown RBP9.68□□□□□ -0.86
SHMT2-205ENST00000553474 LCNL1Q6ZST4 164 aa9.68□□□□□ -0.86
SHMT2-205ENST00000553474 WFDC3Q8IUB2 231 aa9.68□□□□□ -0.86
SHMT2-205ENST00000553474 RNF152Q8N8N0 203 aa9.68□□□□□ -0.86
SHMT2-205ENST00000553474 UBE2E2Q96LR5 201 aa9.68□□□□□ -0.86
SHMT2-205ENST00000553474 ZFHX3Q15911 3703 aa9.68□□□□□ -0.86
SHMT2-205ENST00000553474 CBY3A6NI87 242 aa9.68□□□□□ -0.86
SHMT2-205ENST00000553474 F8VRH5 84 aa9.68□□□□□ -0.86
SHMT2-205ENST00000553474 H7C1H1 209 aa9.68□□□□□ -0.86
SHMT2-205ENST00000553474 ZC2HC1BQ5TFG8 222 aa9.68□□□□□ -0.86
SHMT2-205ENST00000553474 Q6ZVH6 145 aa9.68□□□□□ -0.86
SHMT2-205ENST00000553474 PCP2Q8IVA1 136 aa9.68□□□□□ -0.86
SHMT2-205ENST00000553474 C14orf178Q8N769 122 aaPredicted RBP9.68□□□□□ -0.86
SHMT2-205ENST00000553474 SMR3AQ99954 134 aa9.68□□□□□ -0.86
SHMT2-205ENST00000553474 Q6YL49 198 aa9.67□□□□□ -0.86
SHMT2-205ENST00000553474 MRPL35Q9NZE8 188 aaKnown RBP9.67□□□□□ -0.86
SHMT2-205ENST00000553474 KIF25-AS1Q9Y6Z4 181 aa9.67□□□□□ -0.86
SHMT2-205ENST00000553474 F8P00451 2351 aa9.67□□□□□ -0.86
SHMT2-205ENST00000553474 SONP18583 2426 aaKnown RBP9.66□□□□□ -0.86
SHMT2-205ENST00000553474 IGKV3-7A0A075B6H7 116 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms