RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 RIIAD1A6NNX1 92 aa1.25□□□□□ -2.21
SYNE2-210ENST00000553455 E7EUB6 86 aa1.25□□□□□ -2.21
SYNE2-210ENST00000553455 CCL25O15444 150 aa1.25□□□□□ -2.21
SYNE2-210ENST00000553455 TNFP01375 233 aa1.25□□□□□ -2.21
SYNE2-210ENST00000553455 IGLV1-51P01701 117 aa1.25□□□□□ -2.21
SYNE2-210ENST00000553455 DSCR4P56555 118 aaPredicted RBP1.25□□□□□ -2.21
SYNE2-210ENST00000553455 EIF3IQ13347 325 aaKnown RBP1.25□□□□□ -2.21
SYNE2-210ENST00000553455 POU6F1Q14863 301 aa1.25□□□□□ -2.21
SYNE2-210ENST00000553455 SNCBQ16143 134 aa1.25□□□□□ -2.21
SYNE2-210ENST00000553455 SPRNQ5BIV9 151 aa1.25□□□□□ -2.21
SYNE2-210ENST00000553455 C1orf134Q5TEV5 83 aa1.25□□□□□ -2.21
SYNE2-210ENST00000553455 GPX7Q96SL4 187 aaPredicted RBP1.25□□□□□ -2.21
SYNE2-210ENST00000553455 PRRT1Q99946 306 aa1.25□□□□□ -2.21
SYNE2-210ENST00000553455 HOPXQ9BPY8 73 aaPredicted RBP1.25□□□□□ -2.21
SYNE2-210ENST00000553455 OR2J1Q9GZK6 312 aa1.25□□□□□ -2.21
SYNE2-210ENST00000553455 PBOV1Q9GZY1 135 aa1.25□□□□□ -2.21
SYNE2-210ENST00000553455 POPDC3Q9HBV1 291 aa1.25□□□□□ -2.21
SYNE2-210ENST00000553455 TAS2R7Q9NYW3 318 aa1.25□□□□□ -2.21
SYNE2-210ENST00000553455 UBR5O95071 2799 aaPredicted RBP1.25□□□□□ -2.21
SYNE2-210ENST00000553455 VPS13CQ709C8 3753 aa1.25□□□□□ -2.21
SYNE2-210ENST00000553455 BOD1L1Q8NFC6 3051 aa1.25□□□□□ -2.21
SYNE2-210ENST00000553455 FASNP49327 2511 aaKnown RBP1.25□□□□□ -2.21
SYNE2-210ENST00000553455 RELNP78509 3460 aa1.24□□□□□ -2.21
SYNE2-210ENST00000553455 TRBV6-4A0A1B0GX49 114 aa1.24□□□□□ -2.21
SYNE2-210ENST00000553455 TLCD2A6NGC4 264 aa1.24□□□□□ -2.21
SYNE2-210ENST00000553455 RPS3P23396 243 aaKnown RBP eCLIP1.24□□□□□ -2.21
SYNE2-210ENST00000553455 RPL22P35268 128 aaKnown RBP1.24□□□□□ -2.21
SYNE2-210ENST00000553455 TAS2R41P59536 307 aa1.24□□□□□ -2.21
SYNE2-210ENST00000553455 KRTAP26-1Q6PEX3 210 aa1.24□□□□□ -2.21
SYNE2-210ENST00000553455 ZNF833PQ6ZTB9 187 aa1.24□□□□□ -2.21
SYNE2-210ENST00000553455 GKN2Q86XP6 184 aa1.24□□□□□ -2.21
SYNE2-210ENST00000553455 ZHX1-C8orf76Q96EF9 292 aa1.24□□□□□ -2.21
SYNE2-210ENST00000553455 TP53RKQ96S44 253 aa1.24□□□□□ -2.21
SYNE2-210ENST00000553455 UFC1Q9Y3C8 167 aa1.24□□□□□ -2.21
SYNE2-210ENST00000553455 GCN1Q92616 2671 aaKnown RBP1.24□□□□□ -2.21
SYNE2-210ENST00000553455 MYO18BQ8IUG5 2567 aa1.24□□□□□ -2.21
SYNE2-210ENST00000553455 SPTBP11277 2137 aa1.24□□□□□ -2.21
SYNE2-210ENST00000553455 TENM4Q6N022 2769 aa1.24□□□□□ -2.21
SYNE2-210ENST00000553455 CENPEQ02224 2701 aa1.23□□□□□ -2.21
SYNE2-210ENST00000553455 ITPR2Q14571 2701 aa1.23□□□□□ -2.21
SYNE2-210ENST00000553455 TRAV10A0A0B4J240 114 aa1.23□□□□□ -2.21
SYNE2-210ENST00000553455 PIAS1O75925 651 aa1.23□□□□□ -2.21
SYNE2-210ENST00000553455 TRGC2P03986 189 aa1.23□□□□□ -2.21
SYNE2-210ENST00000553455 CXCL1P09341 107 aa1.23□□□□□ -2.21
SYNE2-210ENST00000553455 MAXP61244 160 aa1.23□□□□□ -2.21
SYNE2-210ENST00000553455 SARNPP82979 210 aaKnown RBP1.23□□□□□ -2.21
SYNE2-210ENST00000553455 FAM74A1Q5RGS3 127 aa1.23□□□□□ -2.21
SYNE2-210ENST00000553455 MMGT1Q8N4V1 131 aa1.23□□□□□ -2.21
SYNE2-210ENST00000553455 DEFB124Q8NES8 71 aa1.23□□□□□ -2.21
SYNE2-210ENST00000553455 OR5D14Q8NGL3 314 aa1.23□□□□□ -2.21
SYNE2-210ENST00000553455 BORCS5Q969J3 196 aa1.23□□□□□ -2.21
SYNE2-210ENST00000553455 PBDC1Q9BVG4 233 aa1.23□□□□□ -2.21
SYNE2-210ENST00000553455 DDA1Q9BW61 102 aa1.23□□□□□ -2.21
SYNE2-210ENST00000553455 TCEAL2Q9H3H9 227 aaPredicted RBP1.23□□□□□ -2.21
SYNE2-210ENST00000553455 HEATR1Q9H583 2144 aaKnown RBP1.23□□□□□ -2.21
SYNE2-210ENST00000553455 ASH1LQ9NR48 2969 aaKnown RBP1.23□□□□□ -2.21
SYNE2-210ENST00000553455 ASB4Q9Y574 426 aa1.23□□□□□ -2.21
SYNE2-210ENST00000553455 TACC2O95359 2948 aa1.23□□□□□ -2.21
SYNE2-210ENST00000553455 CELSR2Q9HCU4 2923 aa1.23□□□□□ -2.21
SYNE2-210ENST00000553455 FLNBO75369 2602 aaKnown RBP1.23□□□□□ -2.21
SYNE2-210ENST00000553455 CNTRLQ7Z7A1 2325 aa1.23□□□□□ -2.21
SYNE2-210ENST00000553455 SPTA1P02549 2419 aa1.23□□□□□ -2.21
SYNE2-210ENST00000553455 ZNF469Q96JG9 3925 aaPredicted RBP1.22□□□□□ -2.21
SYNE2-210ENST00000553455 COL12A1Q99715 3063 aa1.22□□□□□ -2.21
SYNE2-210ENST00000553455 USP9YO00507 2555 aaPredicted RBP1.22□□□□□ -2.21
SYNE2-210ENST00000553455 USP9XQ93008 2570 aaPredicted RBP1.22□□□□□ -2.21
SYNE2-210ENST00000553455 ZNF462Q96JM2 2506 aa1.22□□□□□ -2.21
SYNE2-210ENST00000553455 SETXQ7Z333 2677 aaKnown RBP1.22□□□□□ -2.21
SYNE2-210ENST00000553455 SPAARA0A1B0GVQ0 90 aa1.22□□□□□ -2.21
SYNE2-210ENST00000553455 PGRMC1O00264 195 aaKnown RBP1.22□□□□□ -2.21
SYNE2-210ENST00000553455 KLF7O75840 302 aaPredicted RBP1.22□□□□□ -2.21
SYNE2-210ENST00000553455 CSN2P05814 226 aa1.22□□□□□ -2.21
SYNE2-210ENST00000553455 CD2P06729 351 aa1.22□□□□□ -2.21
SYNE2-210ENST00000553455 MPC1LP0DKB6 136 aa1.22□□□□□ -2.21
SYNE2-210ENST00000553455 OGNP20774 298 aaKnown RBP1.22□□□□□ -2.21
SYNE2-210ENST00000553455 G0S2P27469 103 aa1.22□□□□□ -2.21
SYNE2-210ENST00000553455 TMBIM6P55061 237 aa1.22□□□□□ -2.21
SYNE2-210ENST00000553455 PLPP5Q8NEB5 264 aa1.22□□□□□ -2.21
SYNE2-210ENST00000553455 CCL4L1Q8NHW4 92 aa1.22□□□□□ -2.21
SYNE2-210ENST00000553455 C1orf54Q8WWF1 131 aa1.22□□□□□ -2.21
SYNE2-210ENST00000553455 POP5Q969H6 163 aaKnown RBP1.22□□□□□ -2.21
SYNE2-210ENST00000553455 MAGOHBQ96A72 148 aaKnown RBP1.22□□□□□ -2.21
SYNE2-210ENST00000553455 LINC00052Q96N35 136 aa1.22□□□□□ -2.21
SYNE2-210ENST00000553455 PCBD2Q9H0N5 130 aa1.22□□□□□ -2.21
SYNE2-210ENST00000553455 MRPL40Q9NQ50 206 aaKnown RBP1.22□□□□□ -2.21
SYNE2-210ENST00000553455 GID8Q9NWU2 228 aa1.22□□□□□ -2.21
SYNE2-210ENST00000553455 SNRNP200O75643 2136 aaKnown RBP1.22□□□□□ -2.21
SYNE2-210ENST00000553455 LRRK2Q5S007 2527 aa1.22□□□□□ -2.21
SYNE2-210ENST00000553455 NBASA2RRP1 2371 aa1.21□□□□□ -2.22
SYNE2-210ENST00000553455 UTP20O75691 2785 aaKnown RBP1.21□□□□□ -2.22
SYNE2-210ENST00000553455 CRYBG3Q68DQ2 2970 aa1.21□□□□□ -2.22
SYNE2-210ENST00000553455 CSMD1Q96PZ7 3565 aa1.21□□□□□ -2.22
SYNE2-210ENST00000553455 DCHS2Q6V1P9 2916 aa1.21□□□□□ -2.22
SYNE2-210ENST00000553455 ZFHX3Q15911 3703 aa1.21□□□□□ -2.22
SYNE2-210ENST00000553455 SPTAN1Q13813 2472 aaKnown RBP1.21□□□□□ -2.22
SYNE2-210ENST00000553455 A0A087WSZ3 146 aa1.21□□□□□ -2.22
SYNE2-210ENST00000553455 IGHV1-58A0A0C4DH39 117 aa1.21□□□□□ -2.22
SYNE2-210ENST00000553455 C17orf112F2Z3M2 114 aa1.21□□□□□ -2.22
SYNE2-210ENST00000553455 IFI6P09912 130 aa1.21□□□□□ -2.22
SYNE2-210ENST00000553455 PIRTP0C851 137 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms