RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 hCG_2014768A0A024R1R8 64 aa10.6□□□□□ -0.71
SHMT2-204ENST00000553324 DNLZQ5SXM8 178 aa10.6□□□□□ -0.71
SHMT2-204ENST00000553324 IL36BQ9NZH7 164 aa10.6□□□□□ -0.71
SHMT2-204ENST00000553324 GNG13Q9P2W3 67 aa10.6□□□□□ -0.71
SHMT2-204ENST00000553324 SCO2A0A1W2PP80 73 aa10.59□□□□□ -0.71
SHMT2-204ENST00000553324 A0A1W2PPQ1 181 aa10.59□□□□□ -0.71
SHMT2-204ENST00000553324 PRSS29PA6NIE9 313 aa10.59□□□□□ -0.71
SHMT2-204ENST00000553324 KRBOX1C9JBD0 128 aa10.59□□□□□ -0.71
SHMT2-204ENST00000553324 K7EQD1 137 aa10.59□□□□□ -0.71
SHMT2-204ENST00000553324 RS1O15537 224 aa10.59□□□□□ -0.71
SHMT2-204ENST00000553324 SH2D1AO60880 128 aa10.59□□□□□ -0.71
SHMT2-204ENST00000553324 BTF3P20290 206 aaKnown RBP10.59□□□□□ -0.71
SHMT2-204ENST00000553324 SRIP30626 198 aa10.59□□□□□ -0.71
SHMT2-204ENST00000553324 CFAP126Q5VTH2 177 aa10.59□□□□□ -0.71
SHMT2-204ENST00000553324 BAGE2Q86Y30 109 aa10.59□□□□□ -0.71
SHMT2-204ENST00000553324 PGPEP1LA6NFU8 196 aa10.58□□□□□ -0.72
SHMT2-204ENST00000553324 A8MWV9 139 aa10.58□□□□□ -0.72
SHMT2-204ENST00000553324 RTL8CO15255 209 aa10.58□□□□□ -0.72
SHMT2-204ENST00000553324 IFNA1P01562 189 aa10.58□□□□□ -0.72
SHMT2-204ENST00000553324 GYPEP15421 78 aa10.58□□□□□ -0.72
SHMT2-204ENST00000553324 GATA1P15976 413 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-204ENST00000553324 CCL20P78556 96 aa10.58□□□□□ -0.72
SHMT2-204ENST00000553324 LYPD5Q6UWN5 251 aa10.58□□□□□ -0.72
SHMT2-204ENST00000553324 SYT8Q8NBV8 401 aa10.58□□□□□ -0.72
SHMT2-204ENST00000553324 PRADC1Q9BSG0 188 aa10.58□□□□□ -0.72
SHMT2-204ENST00000553324 FAT2Q9NYQ8 4349 aa10.57□□□□□ -0.72
SHMT2-204ENST00000553324 TRBV6-4A0A1B0GX49 114 aa10.57□□□□□ -0.72
SHMT2-204ENST00000553324 TAGLN2P37802 199 aaKnown RBP10.57□□□□□ -0.72
SHMT2-204ENST00000553324 LINC01559Q495D7 138 aa10.57□□□□□ -0.72
SHMT2-204ENST00000553324 ZNF506Q5JVG8 444 aa10.57□□□□□ -0.72
SHMT2-204ENST00000553324 C6orf223Q8N319 242 aa10.57□□□□□ -0.72
SHMT2-204ENST00000553324 C9orf62Q8N4C0 152 aa10.57□□□□□ -0.72
SHMT2-204ENST00000553324 MLST8Q9BVC4 326 aa10.57□□□□□ -0.72
SHMT2-204ENST00000553324 DNAH17Q9UFH2 4485 aa10.57□□□□□ -0.72
SHMT2-204ENST00000553324 M0R036 132 aa10.56□□□□□ -0.72
SHMT2-204ENST00000553324 PDE6DO43924 150 aa10.56□□□□□ -0.72
SHMT2-204ENST00000553324 ARMS2P0C7Q2 107 aa10.56□□□□□ -0.72
SHMT2-204ENST00000553324 MGST1P10620 155 aaKnown RBP10.56□□□□□ -0.72
SHMT2-204ENST00000553324 ZFP2Q6ZN57 461 aa10.56□□□□□ -0.72
SHMT2-204ENST00000553324 PHLDA3Q9Y5J5 127 aa10.56□□□□□ -0.72
SHMT2-204ENST00000553324 NACAE9PAV3 2078 aa10.56□□□□□ -0.72
SHMT2-204ENST00000553324 HECTD4Q9Y4D8 3996 aa10.55□□□□□ -0.72
SHMT2-204ENST00000553324 SIVA1O15304 175 aa10.55□□□□□ -0.72
SHMT2-204ENST00000553324 RPL35P42766 123 aaKnown RBP10.55□□□□□ -0.72
SHMT2-204ENST00000553324 RHOHQ15669 191 aa10.55□□□□□ -0.72
SHMT2-204ENST00000553324 C11orf52Q96A22 123 aa10.55□□□□□ -0.72
SHMT2-204ENST00000553324 BOLA1Q9Y3E2 137 aa10.55□□□□□ -0.72
SHMT2-204ENST00000553324 TRAV9-2A0A087WT02 112 aa10.54□□□□□ -0.72
SHMT2-204ENST00000553324 H3BVH4 76 aa10.54□□□□□ -0.72
SHMT2-204ENST00000553324 K7EP13 123 aa10.54□□□□□ -0.72
SHMT2-204ENST00000553324 NXPH4O95158 308 aa10.54□□□□□ -0.72
SHMT2-204ENST00000553324 MEF2BQ02080 365 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-204ENST00000553324 DMRTA1Q5VZB9 504 aa10.54□□□□□ -0.72
SHMT2-204ENST00000553324 SLC25A29Q8N8R3 303 aa10.54□□□□□ -0.72
SHMT2-204ENST00000553324 NHLRC2Q8NBF2 726 aa10.54□□□□□ -0.72
SHMT2-204ENST00000553324 IGHV3-73A0A0B4J1V6 119 aa10.53□□□□□ -0.72
SHMT2-204ENST00000553324 GRIFINA4D1Z8 144 aa10.53□□□□□ -0.72
SHMT2-204ENST00000553324 CXCL1P09341 107 aa10.53□□□□□ -0.72
SHMT2-204ENST00000553324 TIRAPP58753 221 aa10.53□□□□□ -0.72
SHMT2-204ENST00000553324 BLOC1S1P78537 153 aa10.53□□□□□ -0.72
SHMT2-204ENST00000553324 SMIM12Q96EX1 92 aa10.53□□□□□ -0.72
SHMT2-204ENST00000553324 SCRT2Q9NQ03 307 aa10.53□□□□□ -0.72
SHMT2-204ENST00000553324 VAX2Q9UIW0 290 aa10.53□□□□□ -0.72
SHMT2-204ENST00000553324 TMSB15BA0A087X1C1 80 aa10.52□□□□□ -0.73
SHMT2-204ENST00000553324 RHODO00212 210 aa10.52□□□□□ -0.73
SHMT2-204ENST00000553324 MED14OSP0DP75 135 aa10.52□□□□□ -0.73
SHMT2-204ENST00000553324 BCL2P10415 239 aa10.52□□□□□ -0.73
SHMT2-204ENST00000553324 ZNF575Q86XF7 245 aa10.52□□□□□ -0.73
SHMT2-204ENST00000553324 ZFP82Q8N141 532 aa10.52□□□□□ -0.73
SHMT2-204ENST00000553324 PARLQ9H300 379 aa10.52□□□□□ -0.73
SHMT2-204ENST00000553324 A0A1B0GVY2 172 aa10.51□□□□□ -0.73
SHMT2-204ENST00000553324 DAZAP1Q96EP5 407 aaKnown RBP10.51□□□□□ -0.73
SHMT2-204ENST00000553324 BIN3Q9NQY0 253 aa10.51□□□□□ -0.73
SHMT2-204ENST00000553324 MED9Q9NWA0 146 aa10.51□□□□□ -0.73
SHMT2-204ENST00000553324 LOC100131303A0A0U1RQF7 123 aa10.5□□□□□ -0.73
SHMT2-204ENST00000553324 GNG4P50150 75 aa10.5□□□□□ -0.73
SHMT2-204ENST00000553324 PRR27Q6MZM9 219 aa10.5□□□□□ -0.73
SHMT2-204ENST00000553324 SFRP2Q96HF1 295 aa10.5□□□□□ -0.73
SHMT2-204ENST00000553324 LY96Q9Y6Y9 160 aa10.5□□□□□ -0.73
SHMT2-204ENST00000553324 M0R381 172 aa10.49□□□□□ -0.73
SHMT2-204ENST00000553324 EVI2AP22794 236 aa10.49□□□□□ -0.73
SHMT2-204ENST00000553324 CENPWQ5EE01 88 aa10.49□□□□□ -0.73
SHMT2-204ENST00000553324 UFSP1Q6NVU6 142 aa10.49□□□□□ -0.73
SHMT2-204ENST00000553324 ALKAL2Q6UX46 152 aa10.49□□□□□ -0.73
SHMT2-204ENST00000553324 DERL1Q9BUN8 251 aa10.49□□□□□ -0.73
SHMT2-204ENST00000553324 TRAV8-6A0A0B4J262 113 aa10.48□□□□□ -0.73
SHMT2-204ENST00000553324 RPS20P60866 119 aaKnown RBP10.48□□□□□ -0.73
SHMT2-204ENST00000553324 ATP6V0E2Q8NHE4 81 aa10.48□□□□□ -0.73
SHMT2-204ENST00000553324 SSBP4Q9BWG4 385 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-204ENST00000553324 JPT2Q9H910 190 aa10.48□□□□□ -0.73
SHMT2-204ENST00000553324 A0A1B0GVG6 124 aa10.47□□□□□ -0.73
SHMT2-204ENST00000553324 XKRY2A2RUG3 117 aa10.47□□□□□ -0.73
SHMT2-204ENST00000553324 OR5AL1P0C617 328 aa10.47□□□□□ -0.73
SHMT2-204ENST00000553324 DNAH10OSP0CZ25 163 aa10.47□□□□□ -0.73
SHMT2-204ENST00000553324 RPL19P84098 196 aaKnown RBP10.47□□□□□ -0.73
SHMT2-204ENST00000553324 NFE4Q86UQ8 179 aa10.47□□□□□ -0.73
SHMT2-204ENST00000553324 LYPD6BQ8NI32 183 aa10.47□□□□□ -0.73
SHMT2-204ENST00000553324 SAMD10Q9BYL1 202 aa10.47□□□□□ -0.73
SHMT2-204ENST00000553324 KRTAP1-5Q9BYS1 174 aa10.47□□□□□ -0.73
SHMT2-204ENST00000553324 GTSF1LQ9H1H1 148 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 250.8 ms