RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 MRPL23Q16540 153 aaKnown RBP2.25□□□□□ -2.05
ATXN3-217ENST00000553287 IDNKQ5T6J7 187 aa2.25□□□□□ -2.05
ATXN3-217ENST00000553287 ZNF493Q6ZR52 646 aa2.25□□□□□ -2.05
ATXN3-217ENST00000553287 DAZ4Q86SG3 579 aaKnown RBP2.25□□□□□ -2.05
ATXN3-217ENST00000553287 KRTAP13-1Q8IUC0 172 aa2.25□□□□□ -2.05
ATXN3-217ENST00000553287 IQCF2Q8IXL9 164 aa2.25□□□□□ -2.05
ATXN3-217ENST00000553287 OR5H2Q8NGV7 314 aa2.25□□□□□ -2.05
ATXN3-217ENST00000553287 OR52E5Q8NH55 327 aa2.25□□□□□ -2.05
ATXN3-217ENST00000553287 RNASE11Q8TAA1 199 aaKnown RBP2.25□□□□□ -2.05
ATXN3-217ENST00000553287 ZNF431Q8TF32 576 aaPredicted RBP2.25□□□□□ -2.05
ATXN3-217ENST00000553287 FAM210AQ96ND0 272 aa2.25□□□□□ -2.05
ATXN3-217ENST00000553287 RPP21Q9H633 154 aaKnown RBP2.25□□□□□ -2.05
ATXN3-217ENST00000553287 ACOT13Q9NPJ3 140 aa2.25□□□□□ -2.05
ATXN3-217ENST00000553287 CRCT1Q9UGL9 99 aa2.25□□□□□ -2.05
ATXN3-217ENST00000553287 PRO0255Q9UI72 69 aa2.25□□□□□ -2.05
ATXN3-217ENST00000553287 PAIP2BQ9ULR5 123 aaKnown RBP2.25□□□□□ -2.05
ATXN3-217ENST00000553287 CHTOPQ9Y3Y2 248 aaKnown RBP2.25□□□□□ -2.05
ATXN3-217ENST00000553287 C3orf85A0A1B0GTC6 90 aa2.24□□□□□ -2.05
ATXN3-217ENST00000553287 SERTM2A0A1B0GWG4 89 aa2.24□□□□□ -2.05
ATXN3-217ENST00000553287 SNRPGP15A8MWD9 76 aa2.24□□□□□ -2.05
ATXN3-217ENST00000553287 H0Y8G0 127 aa2.24□□□□□ -2.05
ATXN3-217ENST00000553287 L7N2F9 121 aa2.24□□□□□ -2.05
ATXN3-217ENST00000553287 SLC17A3O00476 420 aa2.24□□□□□ -2.05
ATXN3-217ENST00000553287 IAPPP10997 89 aa2.24□□□□□ -2.05
ATXN3-217ENST00000553287 PSMB9P28065 219 aa2.24□□□□□ -2.05
ATXN3-217ENST00000553287 RNASE4P34096 147 aaKnown RBP2.24□□□□□ -2.05
ATXN3-217ENST00000553287 SDC2P34741 201 aa2.24□□□□□ -2.05
ATXN3-217ENST00000553287 PPT1P50897 306 aa2.24□□□□□ -2.05
ATXN3-217ENST00000553287 PIGPP57054 158 aa2.24□□□□□ -2.05
ATXN3-217ENST00000553287 SPCS3P61009 180 aa2.24□□□□□ -2.05
ATXN3-217ENST00000553287 TSPAN5P62079 268 aa2.24□□□□□ -2.05
ATXN3-217ENST00000553287 TRAM1Q15629 374 aa2.24□□□□□ -2.05
ATXN3-217ENST00000553287 OR10J3Q5JRS4 329 aa2.24□□□□□ -2.05
ATXN3-217ENST00000553287 C1orf194Q5T5A4 169 aa2.24□□□□□ -2.05
ATXN3-217ENST00000553287 ZFP1Q6P2D0 407 aa2.24□□□□□ -2.05
ATXN3-217ENST00000553287 Q6ZRU5 148 aa2.24□□□□□ -2.05
ATXN3-217ENST00000553287 LINC00173Q6ZV60 143 aa2.24□□□□□ -2.05
ATXN3-217ENST00000553287 OR10G4Q8NGN3 311 aa2.24□□□□□ -2.05
ATXN3-217ENST00000553287 LRRC20Q8TCA0 184 aa2.24□□□□□ -2.05
ATXN3-217ENST00000553287 RNASEH2CQ8TDP1 164 aaKnown RBP2.24□□□□□ -2.05
ATXN3-217ENST00000553287 RBPMSQ93062 196 aaKnown RBP2.24□□□□□ -2.05
ATXN3-217ENST00000553287 BCL7BQ9BQE9 202 aa2.24□□□□□ -2.05
ATXN3-217ENST00000553287 DPH3P1Q9H4G8 78 aa2.24□□□□□ -2.05
ATXN3-217ENST00000553287 TXNL4BQ9NX01 149 aaKnown RBP2.24□□□□□ -2.05
ATXN3-217ENST00000553287 IGHV3-73A0A0B4J1V6 119 aa2.23□□□□□ -2.05
ATXN3-217ENST00000553287 TRAV5A0A0B4J249 113 aa2.23□□□□□ -2.05
ATXN3-217ENST00000553287 TRDV1A0A1B0GX56 115 aa2.23□□□□□ -2.05
ATXN3-217ENST00000553287 H3BRN7 92 aa2.23□□□□□ -2.05
ATXN3-217ENST00000553287 RPL13AP40429 203 aaKnown RBP2.23□□□□□ -2.05
ATXN3-217ENST00000553287 ACOT6Q3I5F7 207 aaPredicted RBP2.23□□□□□ -2.05
ATXN3-217ENST00000553287 NMSQ5H8A3 153 aa2.23□□□□□ -2.05
ATXN3-217ENST00000553287 LINC01556Q5JQF7 62 aa2.23□□□□□ -2.05
ATXN3-217ENST00000553287 DNLZQ5SXM8 178 aa2.23□□□□□ -2.05
ATXN3-217ENST00000553287 SNX29P2Q8IUI4 249 aa2.23□□□□□ -2.05
ATXN3-217ENST00000553287 SELENOHQ8IZQ5 122 aaKnown RBP2.23□□□□□ -2.05
ATXN3-217ENST00000553287 LGI3Q8N145 548 aa2.23□□□□□ -2.05
ATXN3-217ENST00000553287 C10orf126Q8N4M7 172 aa2.23□□□□□ -2.05
ATXN3-217ENST00000553287 LINC01600Q96MT4 127 aa2.23□□□□□ -2.05
ATXN3-217ENST00000553287 TMEM147Q9BVK8 224 aa2.23□□□□□ -2.05
ATXN3-217ENST00000553287 MRPL32Q9BYC8 188 aaKnown RBP2.23□□□□□ -2.05
ATXN3-217ENST00000553287 SLC25A31Q9H0C2 315 aa2.23□□□□□ -2.05
ATXN3-217ENST00000553287 NDUFB11Q9NX14 153 aa2.23□□□□□ -2.05
ATXN3-217ENST00000553287 TMEM56-RWDD3S4R434 201 aa2.23□□□□□ -2.05
ATXN3-217ENST00000553287 MUC21A0A0G2JKD1 596 aa2.22□□□□□ -2.05
ATXN3-217ENST00000553287 LOC100506127A0A0U1RQW1 187 aa2.22□□□□□ -2.05
ATXN3-217ENST00000553287 CRYM-AS1A6NIL9 109 aa2.22□□□□□ -2.05
ATXN3-217ENST00000553287 H3BP45 60 aa2.22□□□□□ -2.05
ATXN3-217ENST00000553287 GABARAPH6UMI1 98 aa2.22□□□□□ -2.05
ATXN3-217ENST00000553287 ATG12O94817 140 aa2.22□□□□□ -2.05
ATXN3-217ENST00000553287 GABARAPO95166 117 aa2.22□□□□□ -2.05
ATXN3-217ENST00000553287 OR5G3P0C626 314 aa2.22□□□□□ -2.05
ATXN3-217ENST00000553287 LINC00869P0C866 280 aa2.22□□□□□ -2.05
ATXN3-217ENST00000553287 S100GP29377 79 aa2.22□□□□□ -2.05
ATXN3-217ENST00000553287 NUP62P37198 522 aaPredicted RBP2.22□□□□□ -2.05
ATXN3-217ENST00000553287 TCL1AP56279 114 aa2.22□□□□□ -2.05
ATXN3-217ENST00000553287 SYCNQ0VAF6 134 aa2.22□□□□□ -2.05
ATXN3-217ENST00000553287 ZNF846Q147U1 533 aa2.22□□□□□ -2.05
ATXN3-217ENST00000553287 LPCAT3Q6P1A2 487 aa2.22□□□□□ -2.05
ATXN3-217ENST00000553287 PATE2Q6UY27 113 aa2.22□□□□□ -2.05
ATXN3-217ENST00000553287 EIF4E3Q8N5X7 224 aaKnown RBP2.22□□□□□ -2.05
ATXN3-217ENST00000553287 OR10P1Q8NGE3 313 aa2.22□□□□□ -2.05
ATXN3-217ENST00000553287 OR13C8Q8NGS7 320 aa2.22□□□□□ -2.05
ATXN3-217ENST00000553287 DTD1Q8TEA8 209 aa2.22□□□□□ -2.05
ATXN3-217ENST00000553287 BORCS5Q969J3 196 aa2.22□□□□□ -2.05
ATXN3-217ENST00000553287 TRGV9Q99603 122 aa2.22□□□□□ -2.05
ATXN3-217ENST00000553287 SHANK2-AS3Q9BTD1 123 aa2.22□□□□□ -2.05
ATXN3-217ENST00000553287 DUSP21Q9H596 190 aa2.22□□□□□ -2.05
ATXN3-217ENST00000553287 DIABLOQ9NR28 239 aa2.22□□□□□ -2.05
ATXN3-217ENST00000553287 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.22□□□□□ -2.05
ATXN3-217ENST00000553287 SCN3BQ9NY72 215 aa2.22□□□□□ -2.05
ATXN3-217ENST00000553287 ANAPC10Q9UM13 185 aa2.22□□□□□ -2.05
ATXN3-217ENST00000553287 IGKV2-40A0A087WW87 121 aaPredicted RBP2.21□□□□□ -2.06
ATXN3-217ENST00000553287 TRAV8-6A0A0B4J262 113 aa2.21□□□□□ -2.06
ATXN3-217ENST00000553287 A0A0J9YXV3 536 aa2.21□□□□□ -2.06
ATXN3-217ENST00000553287 SMCO3A2RU48 225 aa2.21□□□□□ -2.06
ATXN3-217ENST00000553287 C7orf71A4D174 169 aa2.21□□□□□ -2.06
ATXN3-217ENST00000553287 H3BQ15 152 aa2.21□□□□□ -2.06
ATXN3-217ENST00000553287 M0R3E3 92 aa2.21□□□□□ -2.06
ATXN3-217ENST00000553287 MRPS12O15235 138 aaKnown RBP2.21□□□□□ -2.06
ATXN3-217ENST00000553287 SCGNO76038 276 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms