RNA–Protein interactions for RNA: ENST00000552874.1

NPAS3-213, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-213ENST00000552874 MED9Q9NWA0 146 aa5.41□□□□□ -1.54
NPAS3-213ENST00000552874 TIMM8BQ9Y5J9 83 aaPredicted RBP5.41□□□□□ -1.54
NPAS3-213ENST00000552874 PKD1P98161 4303 aa5.41□□□□□ -1.54
NPAS3-213ENST00000552874 LINC00862A6NCI5 91 aa5.4□□□□□ -1.54
NPAS3-213ENST00000552874 CXorf65A6NEN9 183 aa5.4□□□□□ -1.54
NPAS3-213ENST00000552874 FABP5P3A8MUU1 101 aa5.4□□□□□ -1.54
NPAS3-213ENST00000552874 GHRHP01286 108 aa5.4□□□□□ -1.54
NPAS3-213ENST00000552874 SPART-AS1P0CW21 52 aa5.4□□□□□ -1.54
NPAS3-213ENST00000552874 HTN1P15515 57 aa5.4□□□□□ -1.54
NPAS3-213ENST00000552874 HOXA5P20719 270 aa5.4□□□□□ -1.54
NPAS3-213ENST00000552874 GNG4P50150 75 aa5.4□□□□□ -1.54
NPAS3-213ENST00000552874 LGALS9BQ3B8N2 356 aa5.4□□□□□ -1.54
NPAS3-213ENST00000552874 ZFAND6Q6FIF0 208 aa5.4□□□□□ -1.54
NPAS3-213ENST00000552874 FAM159AQ6UWV7 190 aa5.4□□□□□ -1.54
NPAS3-213ENST00000552874 RASL10AQ92737 203 aa5.4□□□□□ -1.54
NPAS3-213ENST00000552874 KCNS1Q96KK3 526 aa5.4□□□□□ -1.54
NPAS3-213ENST00000552874 MRPL18Q9H0U6 180 aaKnown RBP5.4□□□□□ -1.54
NPAS3-213ENST00000552874 SDF2L1Q9HCN8 221 aa5.4□□□□□ -1.54
NPAS3-213ENST00000552874 MRPL16Q9NX20 251 aaKnown RBP5.4□□□□□ -1.54
NPAS3-213ENST00000552874 IL36BQ9NZH7 164 aa5.4□□□□□ -1.54
NPAS3-213ENST00000552874 NAGKQ9UJ70 344 aa5.4□□□□□ -1.54
NPAS3-213ENST00000552874 LY96Q9Y6Y9 160 aa5.4□□□□□ -1.54
NPAS3-213ENST00000552874 EPPK1P58107 5090 aaKnown RBP5.4□□□□□ -1.55
NPAS3-213ENST00000552874 DYNC1H1Q14204 4646 aaKnown RBP5.39□□□□□ -1.55
NPAS3-213ENST00000552874 TRAV10A0A0B4J240 114 aa5.39□□□□□ -1.55
NPAS3-213ENST00000552874 NUPR2A6NF83 97 aa5.39□□□□□ -1.55
NPAS3-213ENST00000552874 SNURFLB1AK76 121 aa5.39□□□□□ -1.55
NPAS3-213ENST00000552874 B4DEV8 164 aa5.39□□□□□ -1.55
NPAS3-213ENST00000552874 M0R036 132 aa5.39□□□□□ -1.55
NPAS3-213ENST00000552874 SNAI2O43623 268 aa5.39□□□□□ -1.55
NPAS3-213ENST00000552874 IGLC6P0CF74 106 aa5.39□□□□□ -1.55
NPAS3-213ENST00000552874 MED14OSP0DP75 135 aa5.39□□□□□ -1.55
NPAS3-213ENST00000552874 ADCYAP1P18509 176 aa5.39□□□□□ -1.55
NPAS3-213ENST00000552874 OR5I1Q13606 314 aa5.39□□□□□ -1.55
NPAS3-213ENST00000552874 UFSP1Q6NVU6 142 aa5.39□□□□□ -1.55
NPAS3-213ENST00000552874 CEMP1Q6PRD7 247 aaPredicted RBP5.39□□□□□ -1.55
NPAS3-213ENST00000552874 LINC01551Q86U37 167 aa5.39□□□□□ -1.55
NPAS3-213ENST00000552874 OCC1Q8TAD7 63 aa5.39□□□□□ -1.55
NPAS3-213ENST00000552874 KRTAP4-12Q9BQ66 201 aa5.39□□□□□ -1.55
NPAS3-213ENST00000552874 SPXQ9BT56 116 aa5.39□□□□□ -1.55
NPAS3-213ENST00000552874 EIF5A2Q9GZV4 153 aaKnown RBP5.39□□□□□ -1.55
NPAS3-213ENST00000552874 SMDT1Q9H4I9 107 aa5.39□□□□□ -1.55
NPAS3-213ENST00000552874 TRGV1A0A0A0MS02 117 aa5.38□□□□□ -1.55
NPAS3-213ENST00000552874 GAGE12BA1L429 117 aa5.38□□□□□ -1.55
NPAS3-213ENST00000552874 H3BVH4 76 aa5.38□□□□□ -1.55
NPAS3-213ENST00000552874 M0R2P5 195 aa5.38□□□□□ -1.55
NPAS3-213ENST00000552874 GAGE7O76087 117 aa5.38□□□□□ -1.55
NPAS3-213ENST00000552874 GAGE12FP0CL80 117 aa5.38□□□□□ -1.55
NPAS3-213ENST00000552874 GAGE12GP0CL81 117 aa5.38□□□□□ -1.55
NPAS3-213ENST00000552874 GAGE12IP0CL82 117 aa5.38□□□□□ -1.55
NPAS3-213ENST00000552874 DAD1P61803 113 aa5.38□□□□□ -1.55
NPAS3-213ENST00000552874 PIK3CD-AS1Q5SR53 167 aa5.38□□□□□ -1.55
NPAS3-213ENST00000552874 FAM231DQ6ZW35 169 aa5.38□□□□□ -1.55
NPAS3-213ENST00000552874 SMIM7Q9BQ49 75 aa5.38□□□□□ -1.55
NPAS3-213ENST00000552874 NDUFAF3Q9BU61 184 aa5.38□□□□□ -1.55
NPAS3-213ENST00000552874 APLNQ9ULZ1 77 aa5.38□□□□□ -1.55
NPAS3-213ENST00000552874 DEFB131BA0A096LNP1 70 aa5.37□□□□□ -1.55
NPAS3-213ENST00000552874 GRIFINA4D1Z8 144 aa5.37□□□□□ -1.55
NPAS3-213ENST00000552874 ORM1P02763 201 aa5.37□□□□□ -1.55
NPAS3-213ENST00000552874 DEFB130BP0DP73 79 aa5.37□□□□□ -1.55
NPAS3-213ENST00000552874 DEFB130AP0DP74 79 aa5.37□□□□□ -1.55
NPAS3-213ENST00000552874 CTRLP40313 264 aa5.37□□□□□ -1.55
NPAS3-213ENST00000552874 ASIPP42127 132 aa5.37□□□□□ -1.55
NPAS3-213ENST00000552874 RPL23P62829 140 aaKnown RBP5.37□□□□□ -1.55
NPAS3-213ENST00000552874 PRR27Q6MZM9 219 aa5.37□□□□□ -1.55
NPAS3-213ENST00000552874 NUDT10Q8NFP7 164 aa5.37□□□□□ -1.55
NPAS3-213ENST00000552874 OR10AG1Q8NH19 301 aa5.37□□□□□ -1.55
NPAS3-213ENST00000552874 ISOC2Q96AB3 205 aa5.37□□□□□ -1.55
NPAS3-213ENST00000552874 NUDT11Q96G61 164 aa5.37□□□□□ -1.55
NPAS3-213ENST00000552874 RNASE7Q9H1E1 156 aaKnown RBP5.37□□□□□ -1.55
NPAS3-213ENST00000552874 IGHV4-4A0A075B6R2 117 aa5.36□□□□□ -1.55
NPAS3-213ENST00000552874 TMSB15BA0A087X1C1 80 aa5.36□□□□□ -1.55
NPAS3-213ENST00000552874 TRAV4A0A0B4J268 109 aa5.36□□□□□ -1.55
NPAS3-213ENST00000552874 ZNF727A8MUV8 499 aa5.36□□□□□ -1.55
NPAS3-213ENST00000552874 RS1O15537 224 aa5.36□□□□□ -1.55
NPAS3-213ENST00000552874 ATP5G1P05496 136 aa5.36□□□□□ -1.55
NPAS3-213ENST00000552874 OR5AL1P0C617 328 aa5.36□□□□□ -1.55
NPAS3-213ENST00000552874 SFTA3P0C7M3 94 aa5.36□□□□□ -1.55
NPAS3-213ENST00000552874 ARMS2P0C7Q2 107 aa5.36□□□□□ -1.55
NPAS3-213ENST00000552874 LINC00694P0DN24 101 aa5.36□□□□□ -1.55
NPAS3-213ENST00000552874 GZMBP10144 247 aa5.36□□□□□ -1.55
NPAS3-213ENST00000552874 MGST1P10620 155 aaKnown RBP5.36□□□□□ -1.55
NPAS3-213ENST00000552874 FHL2Q14192 279 aa5.36□□□□□ -1.55
NPAS3-213ENST00000552874 PEA15Q15121 130 aa5.36□□□□□ -1.55
NPAS3-213ENST00000552874 FAM74A3Q4VXF1 159 aa5.36□□□□□ -1.55
NPAS3-213ENST00000552874 CT83Q5H943 113 aa5.36□□□□□ -1.55
NPAS3-213ENST00000552874 CFAP126Q5VTH2 177 aa5.36□□□□□ -1.55
NPAS3-213ENST00000552874 TMEM88Q6PEY1 159 aa5.36□□□□□ -1.55
NPAS3-213ENST00000552874 GTSF1Q8WW33 167 aa5.36□□□□□ -1.55
NPAS3-213ENST00000552874 VSIG2Q96IQ7 327 aa5.36□□□□□ -1.55
NPAS3-213ENST00000552874 ZNF479Q96JC4 524 aa5.36□□□□□ -1.55
NPAS3-213ENST00000552874 CNFNQ9BYD5 112 aa5.36□□□□□ -1.55
NPAS3-213ENST00000552874 JPT2Q9H910 190 aa5.36□□□□□ -1.55
NPAS3-213ENST00000552874 V9GYV3 84 aa5.36□□□□□ -1.55
NPAS3-213ENST00000552874 SNAPINO95295 136 aa5.35□□□□□ -1.55
NPAS3-213ENST00000552874 CEBPGP53567 150 aa5.35□□□□□ -1.55
NPAS3-213ENST00000552874 RAB14P61106 215 aa5.35□□□□□ -1.55
NPAS3-213ENST00000552874 SSTP61278 116 aa5.35□□□□□ -1.55
NPAS3-213ENST00000552874 ZNF876PQ49A33 203 aa5.35□□□□□ -1.55
NPAS3-213ENST00000552874 OR2D3Q8NGH3 330 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms