RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 HOXA5P20719 270 aa7.45□□□□□ -1.22
PTCH1-225ENST00000551845 ZNF506Q5JVG8 444 aa7.45□□□□□ -1.22
PTCH1-225ENST00000551845 OR4C5Q8NGB2 326 aa7.45□□□□□ -1.22
PTCH1-225ENST00000551845 PTH2Q96A98 100 aa7.45□□□□□ -1.22
PTCH1-225ENST00000551845 SMIM12Q96EX1 92 aa7.45□□□□□ -1.22
PTCH1-225ENST00000551845 C9orf85Q96MD7 179 aa7.45□□□□□ -1.22
PTCH1-225ENST00000551845 BIN3Q9NQY0 253 aa7.45□□□□□ -1.22
PTCH1-225ENST00000551845 HHLA3Q9XRX5 114 aa7.45□□□□□ -1.22
PTCH1-225ENST00000551845 PCLOQ9Y6V0 5065 aa7.44□□□□□ -1.22
PTCH1-225ENST00000551845 TMSB15BA0A087X1C1 80 aa7.44□□□□□ -1.22
PTCH1-225ENST00000551845 TRGV4A0A0C4DH28 118 aa7.44□□□□□ -1.22
PTCH1-225ENST00000551845 A0A0J9YY99 117 aa7.44□□□□□ -1.22
PTCH1-225ENST00000551845 GRIFINA4D1Z8 144 aa7.44□□□□□ -1.22
PTCH1-225ENST00000551845 TMEM250H0YL14 139 aa7.44□□□□□ -1.22
PTCH1-225ENST00000551845 H3BNG1 76 aa7.44□□□□□ -1.22
PTCH1-225ENST00000551845 CIDEAO60543 219 aa7.44□□□□□ -1.22
PTCH1-225ENST00000551845 ARMS2P0C7Q2 107 aa7.44□□□□□ -1.22
PTCH1-225ENST00000551845 MGST1P10620 155 aaKnown RBP7.44□□□□□ -1.22
PTCH1-225ENST00000551845 CENPWQ5EE01 88 aa7.44□□□□□ -1.22
PTCH1-225ENST00000551845 DNLZQ5SXM8 178 aa7.44□□□□□ -1.22
PTCH1-225ENST00000551845 PRR27Q6MZM9 219 aa7.44□□□□□ -1.22
PTCH1-225ENST00000551845 IL36BQ9NZH7 164 aa7.44□□□□□ -1.22
PTCH1-225ENST00000551845 PRO0255Q9UI72 69 aa7.44□□□□□ -1.22
PTCH1-225ENST00000551845 TRAV4A0A0B4J268 109 aa7.43□□□□□ -1.22
PTCH1-225ENST00000551845 PGPEP1LA6NFU8 196 aa7.43□□□□□ -1.22
PTCH1-225ENST00000551845 PAX4O43316 350 aa7.43□□□□□ -1.22
PTCH1-225ENST00000551845 CCL18P55774 89 aa7.43□□□□□ -1.22
PTCH1-225ENST00000551845 FHL2Q14192 279 aa7.43□□□□□ -1.22
PTCH1-225ENST00000551845 RNF212Q495C1 297 aa7.43□□□□□ -1.22
PTCH1-225ENST00000551845 TOR2AQ5JU69 321 aa7.43□□□□□ -1.22
PTCH1-225ENST00000551845 UBE2DNLQ8IWF7 75 aa7.43□□□□□ -1.22
PTCH1-225ENST00000551845 POM121L12Q8N7R1 296 aa7.43□□□□□ -1.22
PTCH1-225ENST00000551845 SYT8Q8NBV8 401 aa7.43□□□□□ -1.22
PTCH1-225ENST00000551845 ZNF479Q96JC4 524 aa7.43□□□□□ -1.22
PTCH1-225ENST00000551845 FAM210AQ96ND0 272 aa7.43□□□□□ -1.22
PTCH1-225ENST00000551845 PHLDA3Q9Y5J5 127 aa7.43□□□□□ -1.22
PTCH1-225ENST00000551845 HECTD4Q9Y4D8 3996 aa7.42□□□□□ -1.22
PTCH1-225ENST00000551845 NDUFS6O75380 124 aaKnown RBP7.42□□□□□ -1.22
PTCH1-225ENST00000551845 IGLV2-8P01709 118 aa7.42□□□□□ -1.22
PTCH1-225ENST00000551845 SFTA3P0C7M3 94 aa7.42□□□□□ -1.22
PTCH1-225ENST00000551845 PIK3CD-AS1Q5SR53 167 aa7.42□□□□□ -1.22
PTCH1-225ENST00000551845 VSIG2Q96IQ7 327 aa7.42□□□□□ -1.22
PTCH1-225ENST00000551845 A8MWV9 139 aa7.41□□□□□ -1.22
PTCH1-225ENST00000551845 H3BVH4 76 aa7.41□□□□□ -1.22
PTCH1-225ENST00000551845 RS1O15537 224 aa7.41□□□□□ -1.22
PTCH1-225ENST00000551845 CEBPGP53567 150 aa7.41□□□□□ -1.22
PTCH1-225ENST00000551845 CRYBA4P53673 196 aa7.41□□□□□ -1.22
PTCH1-225ENST00000551845 RPS20P60866 119 aaKnown RBP7.41□□□□□ -1.22
PTCH1-225ENST00000551845 RAB14P61106 215 aa7.41□□□□□ -1.22
PTCH1-225ENST00000551845 PEA15Q15121 130 aa7.41□□□□□ -1.22
PTCH1-225ENST00000551845 CFAP126Q5VTH2 177 aa7.41□□□□□ -1.22
PTCH1-225ENST00000551845 ZNF575Q86XF7 245 aa7.41□□□□□ -1.22
PTCH1-225ENST00000551845 OCC1Q8TAD7 63 aa7.41□□□□□ -1.22
PTCH1-225ENST00000551845 PCNPQ8WW12 178 aaKnown RBP7.41□□□□□ -1.22
PTCH1-225ENST00000551845 PARLQ9H300 379 aa7.41□□□□□ -1.22
PTCH1-225ENST00000551845 DNAH10Q8IVF4 4471 aa7.41□□□□□ -1.22
PTCH1-225ENST00000551845 TRBV20OR9-2A0A075B6H5 130 aa7.4□□□□□ -1.22
PTCH1-225ENST00000551845 XKRY2A2RUG3 117 aa7.4□□□□□ -1.22
PTCH1-225ENST00000551845 P01737 135 aa7.4□□□□□ -1.22
PTCH1-225ENST00000551845 CXCL1P09341 107 aa7.4□□□□□ -1.22
PTCH1-225ENST00000551845 MED14OSP0DP75 135 aa7.4□□□□□ -1.22
PTCH1-225ENST00000551845 FAM3BP58499 235 aaPredicted RBP7.4□□□□□ -1.22
PTCH1-225ENST00000551845 RPL19P84098 196 aaKnown RBP7.4□□□□□ -1.22
PTCH1-225ENST00000551845 MRPL23Q16540 153 aaKnown RBP7.4□□□□□ -1.22
PTCH1-225ENST00000551845 SMDT1Q9H4I9 107 aa7.4□□□□□ -1.22
PTCH1-225ENST00000551845 SCRT2Q9NQ03 307 aa7.4□□□□□ -1.22
PTCH1-225ENST00000551845 A0A096LPF7 62 aa7.39□□□□□ -1.23
PTCH1-225ENST00000551845 C19orf71A6NCJ1 209 aa7.39□□□□□ -1.23
PTCH1-225ENST00000551845 SRP19P09132 144 aaKnown RBP7.39□□□□□ -1.23
PTCH1-225ENST00000551845 ZFP2Q6ZN57 461 aa7.39□□□□□ -1.23
PTCH1-225ENST00000551845 ZFP82Q8N141 532 aa7.39□□□□□ -1.23
PTCH1-225ENST00000551845 NUDT10Q8NFP7 164 aa7.39□□□□□ -1.23
PTCH1-225ENST00000551845 OR2D3Q8NGH3 330 aa7.39□□□□□ -1.23
PTCH1-225ENST00000551845 NUDT11Q96G61 164 aa7.39□□□□□ -1.23
PTCH1-225ENST00000551845 SSBP4Q9BWG4 385 aaPredicted RBP7.39□□□□□ -1.23
PTCH1-225ENST00000551845 ICOSQ9Y6W8 199 aa7.39□□□□□ -1.23
PTCH1-225ENST00000551845 RYR1P21817 5038 aa7.38□□□□□ -1.23
PTCH1-225ENST00000551845 IGHV3-73A0A0B4J1V6 119 aa7.38□□□□□ -1.23
PTCH1-225ENST00000551845 ZNF727A8MUV8 499 aa7.38□□□□□ -1.23
PTCH1-225ENST00000551845 M0R381 172 aa7.38□□□□□ -1.23
PTCH1-225ENST00000551845 OR5AL1P0C617 328 aa7.38□□□□□ -1.23
PTCH1-225ENST00000551845 GATA1P15976 413 aaPredicted RBP7.38□□□□□ -1.23
PTCH1-225ENST00000551845 ESRGQ1W209 222 aa7.38□□□□□ -1.23
PTCH1-225ENST00000551845 SPANXN1Q5VSR9 72 aa7.38□□□□□ -1.23
PTCH1-225ENST00000551845 PRADC1Q9BSG0 188 aa7.38□□□□□ -1.23
PTCH1-225ENST00000551845 LY96Q9Y6Y9 160 aa7.38□□□□□ -1.23
PTCH1-225ENST00000551845 TRBV6-4A0A1B0GX49 114 aa7.37□□□□□ -1.23
PTCH1-225ENST00000551845 SNAI2O43623 268 aa7.37□□□□□ -1.23
PTCH1-225ENST00000551845 GYPEP15421 78 aa7.37□□□□□ -1.23
PTCH1-225ENST00000551845 SRIP30626 198 aa7.37□□□□□ -1.23
PTCH1-225ENST00000551845 SSTP61278 116 aa7.37□□□□□ -1.23
PTCH1-225ENST00000551845 FAM74A3Q4VXF1 159 aa7.37□□□□□ -1.23
PTCH1-225ENST00000551845 NEGR1Q7Z3B1 354 aa7.37□□□□□ -1.23
PTCH1-225ENST00000551845 SFRP2Q96HF1 295 aa7.37□□□□□ -1.23
PTCH1-225ENST00000551845 SMIM7Q9BQ49 75 aa7.37□□□□□ -1.23
PTCH1-225ENST00000551845 JPT2Q9H910 190 aa7.37□□□□□ -1.23
PTCH1-225ENST00000551845 LINC00588Q9Y4M8 146 aa7.37□□□□□ -1.23
PTCH1-225ENST00000551845 A0A1W2PPQ1 181 aa7.36□□□□□ -1.23
PTCH1-225ENST00000551845 F2Z2F3 143 aa7.36□□□□□ -1.23
PTCH1-225ENST00000551845 K7EN84 100 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms