RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 SH3BGRL3Q9H299 93 aa13.75□□□□□ -0.21
CACNB3-218ENST00000550771 PGPEP1LA6NFU8 196 aa13.74□□□□□ -0.21
CACNB3-218ENST00000550771 IGLV2-11P01706 119 aa13.74□□□□□ -0.21
CACNB3-218ENST00000550771 RNASE3P12724 160 aaKnown RBP13.74□□□□□ -0.21
CACNB3-218ENST00000550771 ZFP69Q49AA0 526 aa13.74□□□□□ -0.21
CACNB3-218ENST00000550771 SMUG1Q53HV7 270 aa13.74□□□□□ -0.21
CACNB3-218ENST00000550771 FAM30AQ9NZY2 134 aa13.74□□□□□ -0.21
CACNB3-218ENST00000550771 GCHFRP30047 84 aa13.73□□□□□ -0.21
CACNB3-218ENST00000550771 DEFA1P59665 94 aa13.73□□□□□ -0.21
CACNB3-218ENST00000550771 DEFA3P59666 94 aa13.73□□□□□ -0.21
CACNB3-218ENST00000550771 FLI1Q01543 452 aaPredicted RBP13.73□□□□□ -0.21
CACNB3-218ENST00000550771 TMEM75Q8N9X5 138 aa13.73□□□□□ -0.21
CACNB3-218ENST00000550771 RAB24Q969Q5 203 aa13.73□□□□□ -0.21
CACNB3-218ENST00000550771 DNAH8Q96JB1 4490 aa13.73□□□□□ -0.21
CACNB3-218ENST00000550771 PIK3CD-AS1Q5SR53 167 aa13.72□□□□□ -0.21
CACNB3-218ENST00000550771 ZFP2Q6ZN57 461 aa13.72□□□□□ -0.21
CACNB3-218ENST00000550771 PSMG3Q9BT73 122 aaPredicted RBP13.72□□□□□ -0.21
CACNB3-218ENST00000550771 EPDR1Q9UM22 224 aa13.72□□□□□ -0.21
CACNB3-218ENST00000550771 SUMO1P63165 101 aaKnown RBP13.71□□□□□ -0.21
CACNB3-218ENST00000550771 SAPCD1Q5SSQ6 148 aa13.71□□□□□ -0.21
CACNB3-218ENST00000550771 PRNTQ86SH4 94 aa13.71□□□□□ -0.21
CACNB3-218ENST00000550771 CYB561D1Q8N8Q1 229 aa13.71□□□□□ -0.21
CACNB3-218ENST00000550771 TMEM167BQ9NRX6 74 aa13.71□□□□□ -0.21
CACNB3-218ENST00000550771 TRAV8-3A0A0A6YYJ7 113 aa13.7□□□□□ -0.22
CACNB3-218ENST00000550771 A8MWV9 139 aa13.7□□□□□ -0.22
CACNB3-218ENST00000550771 GGTLC3B5MD39 225 aa13.7□□□□□ -0.22
CACNB3-218ENST00000550771 MBP02144 154 aa13.7□□□□□ -0.22
CACNB3-218ENST00000550771 LINC00694P0DN24 101 aa13.7□□□□□ -0.22
CACNB3-218ENST00000550771 PARLQ9H300 379 aa13.7□□□□□ -0.22
CACNB3-218ENST00000550771 SERF2P84101 59 aa13.69□□□□□ -0.22
CACNB3-218ENST00000550771 WFDC2Q14508 124 aa13.69□□□□□ -0.22
CACNB3-218ENST00000550771 Q6ZSA8 131 aa13.69□□□□□ -0.22
CACNB3-218ENST00000550771 HSD17B11Q8NBQ5 300 aa13.69□□□□□ -0.22
CACNB3-218ENST00000550771 IGKV3D-20A0A0C4DH25 116 aa13.68□□□□□ -0.22
CACNB3-218ENST00000550771 CXorf1O96002 111 aa13.68□□□□□ -0.22
CACNB3-218ENST00000550771 ATP6V0CP27449 155 aa13.68□□□□□ -0.22
CACNB3-218ENST00000550771 TOR2AQ5JU69 321 aa13.68□□□□□ -0.22
CACNB3-218ENST00000550771 Q8N3U1 123 aa13.68□□□□□ -0.22
CACNB3-218ENST00000550771 SRRM2Q9UQ35 2752 aaKnown RBP13.67□□□□□ -0.22
CACNB3-218ENST00000550771 GAGE12JA6NER3 117 aa13.67□□□□□ -0.22
CACNB3-218ENST00000550771 PLA2G1BP04054 148 aaKnown RBP13.67□□□□□ -0.22
CACNB3-218ENST00000550771 S100A4P26447 101 aaKnown RBP13.67□□□□□ -0.22
CACNB3-218ENST00000550771 GAGE1Q13065 139 aa13.67□□□□□ -0.22
CACNB3-218ENST00000550771 GAGE4Q13068 117 aa13.67□□□□□ -0.22
CACNB3-218ENST00000550771 GAGE5Q13069 117 aa13.67□□□□□ -0.22
CACNB3-218ENST00000550771 GAGE13Q4V321 117 aa13.67□□□□□ -0.22
CACNB3-218ENST00000550771 AQP10Q96PS8 301 aa13.67□□□□□ -0.22
CACNB3-218ENST00000550771 A0A087WWC5 75 aa13.66□□□□□ -0.22
CACNB3-218ENST00000550771 J3QL48 77 aa13.66□□□□□ -0.22
CACNB3-218ENST00000550771 FGF8P55075 233 aaPredicted RBP13.66□□□□□ -0.22
CACNB3-218ENST00000550771 LGALSLQ3ZCW2 172 aaPredicted RBP13.66□□□□□ -0.22
CACNB3-218ENST00000550771 LINC00479Q96M42 142 aa13.66□□□□□ -0.22
CACNB3-218ENST00000550771 ACTR3CQ9C0K3 210 aaPredicted RBP13.66□□□□□ -0.22
CACNB3-218ENST00000550771 TNFSF18Q9UNG2 199 aa13.66□□□□□ -0.22
CACNB3-218ENST00000550771 COX11Q9Y6N1 276 aa13.66□□□□□ -0.22
CACNB3-218ENST00000550771 A0A1W2PRE2 83 aa13.65□□□□□ -0.22
CACNB3-218ENST00000550771 ASIPP42127 132 aa13.65□□□□□ -0.22
CACNB3-218ENST00000550771 UFSP1Q6NVU6 142 aa13.65□□□□□ -0.22
CACNB3-218ENST00000550771 DAZ4Q86SG3 579 aaKnown RBP13.65□□□□□ -0.22
CACNB3-218ENST00000550771 DAZ3Q9NR90 486 aaKnown RBP13.65□□□□□ -0.22
CACNB3-218ENST00000550771 FABP5P3A8MUU1 101 aa13.64□□□□□ -0.23
CACNB3-218ENST00000550771 OR2T35Q8NGX2 323 aa13.64□□□□□ -0.23
CACNB3-218ENST00000550771 IL36BQ9NZH7 164 aa13.64□□□□□ -0.23
CACNB3-218ENST00000550771 Q9UF83 564 aa13.63□□□□□ -0.23
CACNB3-218ENST00000550771 ARL2-SNX15V9GYD0 113 aa13.63□□□□□ -0.23
CACNB3-218ENST00000550771 TRAV34A0A0B4J273 112 aa13.62□□□□□ -0.23
CACNB3-218ENST00000550771 RHODO00212 210 aa13.62□□□□□ -0.23
CACNB3-218ENST00000550771 LECT2O14960 151 aa13.62□□□□□ -0.23
CACNB3-218ENST00000550771 LINC00528Q8N1L1 170 aa13.62□□□□□ -0.23
CACNB3-218ENST00000550771 C14orf178Q8N769 122 aaPredicted RBP13.62□□□□□ -0.23
CACNB3-218ENST00000550771 RMI2Q96E14 147 aa13.62□□□□□ -0.23
CACNB3-218ENST00000550771 SAMD10Q9BYL1 202 aa13.62□□□□□ -0.23
CACNB3-218ENST00000550771 ALG5Q9Y673 324 aa13.62□□□□□ -0.23
CACNB3-218ENST00000550771 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.61□□□□□ -0.23
CACNB3-218ENST00000550771 SEC11BP0C7V7 166 aa13.61□□□□□ -0.23
CACNB3-218ENST00000550771 DNLZQ5SXM8 178 aa13.61□□□□□ -0.23
CACNB3-218ENST00000550771 DMRTA1Q5VZB9 504 aa13.61□□□□□ -0.23
CACNB3-218ENST00000550771 JPT2Q9H910 190 aa13.61□□□□□ -0.23
CACNB3-218ENST00000550771 KRTAP29-1A8MX34 341 aaPredicted RBP13.6□□□□□ -0.23
CACNB3-218ENST00000550771 SYT8Q8NBV8 401 aa13.6□□□□□ -0.23
CACNB3-218ENST00000550771 DEFB104AQ8WTQ1 72 aa13.6□□□□□ -0.23
CACNB3-218ENST00000550771 BAALCQ8WXS3 180 aa13.6□□□□□ -0.23
CACNB3-218ENST00000550771 URGCP-MRPS24S4R325 110 aa13.6□□□□□ -0.23
CACNB3-218ENST00000550771 B4DEV8 164 aa13.59□□□□□ -0.23
CACNB3-218ENST00000550771 H3BVH4 76 aa13.59□□□□□ -0.23
CACNB3-218ENST00000550771 IFNA7P01567 189 aa13.59□□□□□ -0.23
CACNB3-218ENST00000550771 NIT1Q86X76 327 aa13.59□□□□□ -0.23
CACNB3-218ENST00000550771 Q8N976 141 aa13.59□□□□□ -0.23
CACNB3-218ENST00000550771 NKX6-2Q9C056 277 aaPredicted RBP13.59□□□□□ -0.23
CACNB3-218ENST00000550771 PEX7O00628 323 aa13.58□□□□□ -0.24
CACNB3-218ENST00000550771 COX8CQ7Z4L0 72 aa13.58□□□□□ -0.24
CACNB3-218ENST00000550771 Q86TA4 180 aa13.58□□□□□ -0.24
CACNB3-218ENST00000550771 HIST1H2BAQ96A08 127 aa13.58□□□□□ -0.24
CACNB3-218ENST00000550771 CTXND1A0A1B0GTU2 59 aa13.57□□□□□ -0.24
CACNB3-218ENST00000550771 RNF222A6NCQ9 220 aa13.57□□□□□ -0.24
CACNB3-218ENST00000550771 KRBOX1C9JBD0 128 aa13.57□□□□□ -0.24
CACNB3-218ENST00000550771 ARMS2P0C7Q2 107 aa13.57□□□□□ -0.24
CACNB3-218ENST00000550771 CRIP1P50238 77 aa13.57□□□□□ -0.24
CACNB3-218ENST00000550771 OR11H4Q8NGC9 324 aa13.57□□□□□ -0.24
CACNB3-218ENST00000550771 RBFOX3A6NFN3 312 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms