RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 TM2D2Q9BX73 214 aa7.57□□□□□ -1.2
SMARCD1-208ENST00000550280 SAMD10Q9BYL1 202 aa7.57□□□□□ -1.2
SMARCD1-208ENST00000550280 PARLQ9H300 379 aa7.57□□□□□ -1.2
SMARCD1-208ENST00000550280 IGKV3D-20A0A0C4DH25 116 aa7.56□□□□□ -1.2
SMARCD1-208ENST00000550280 CIDEAO60543 219 aa7.56□□□□□ -1.2
SMARCD1-208ENST00000550280 GCGP01275 180 aa7.56□□□□□ -1.2
SMARCD1-208ENST00000550280 TCRAP04437 139 aa7.56□□□□□ -1.2
SMARCD1-208ENST00000550280 MGST1P10620 155 aaKnown RBP7.56□□□□□ -1.2
SMARCD1-208ENST00000550280 RPL12P30050 165 aaKnown RBP7.56□□□□□ -1.2
SMARCD1-208ENST00000550280 C14orf178Q8N769 122 aaPredicted RBP7.56□□□□□ -1.2
SMARCD1-208ENST00000550280 CIRBP-AS1Q8TBR5 109 aa7.56□□□□□ -1.2
SMARCD1-208ENST00000550280 SUN5Q8TC36 379 aa7.56□□□□□ -1.2
SMARCD1-208ENST00000550280 LINC00479Q96M42 142 aa7.56□□□□□ -1.2
SMARCD1-208ENST00000550280 RNF222A6NCQ9 220 aa7.55□□□□□ -1.2
SMARCD1-208ENST00000550280 GGTLC3B5MD39 225 aa7.55□□□□□ -1.2
SMARCD1-208ENST00000550280 ARL14EPLP0DKL9 152 aa7.55□□□□□ -1.2
SMARCD1-208ENST00000550280 HNRNPA3P51991 378 aaKnown RBP7.55□□□□□ -1.2
SMARCD1-208ENST00000550280 FAM74A1Q5RGS3 127 aa7.55□□□□□ -1.2
SMARCD1-208ENST00000550280 MZT2BQ6NZ67 158 aa7.55□□□□□ -1.2
SMARCD1-208ENST00000550280 CHAC1Q9BUX1 264 aa7.55□□□□□ -1.2
SMARCD1-208ENST00000550280 PSG8Q9UQ74 426 aa7.55□□□□□ -1.2
SMARCD1-208ENST00000550280 BOLA1Q9Y3E2 137 aa7.55□□□□□ -1.2
SMARCD1-208ENST00000550280 TRAV8-3A0A0A6YYJ7 113 aa7.54□□□□□ -1.2
SMARCD1-208ENST00000550280 TAAR5O14804 337 aa7.54□□□□□ -1.2
SMARCD1-208ENST00000550280 STAG3L2P0CL84 134 aa7.54□□□□□ -1.2
SMARCD1-208ENST00000550280 STAG3L3P0CL85 134 aa7.54□□□□□ -1.2
SMARCD1-208ENST00000550280 CYCSP99999 105 aaKnown RBP7.54□□□□□ -1.2
SMARCD1-208ENST00000550280 ACOT6Q3I5F7 207 aaPredicted RBP7.54□□□□□ -1.2
SMARCD1-208ENST00000550280 OR2T35Q8NGX2 323 aa7.54□□□□□ -1.2
SMARCD1-208ENST00000550280 SCGB1C1Q8TD33 95 aa7.54□□□□□ -1.2
SMARCD1-208ENST00000550280 INMT-MINDY4F8WBC2 141 aa7.53□□□□□ -1.2
SMARCD1-208ENST00000550280 FLI1Q01543 452 aaPredicted RBP7.53□□□□□ -1.2
SMARCD1-208ENST00000550280 SERTAD4-AS1Q5TG53 156 aa7.53□□□□□ -1.2
SMARCD1-208ENST00000550280 ZFP2Q6ZN57 461 aa7.53□□□□□ -1.2
SMARCD1-208ENST00000550280 NIT1Q86X76 327 aa7.53□□□□□ -1.2
SMARCD1-208ENST00000550280 CYB561D1Q8N8Q1 229 aa7.53□□□□□ -1.2
SMARCD1-208ENST00000550280 C5orf17Q8NAS9 161 aa7.53□□□□□ -1.2
SMARCD1-208ENST00000550280 OR10G9Q8NGN4 311 aa7.53□□□□□ -1.2
SMARCD1-208ENST00000550280 OR10G7Q8NGN6 311 aa7.53□□□□□ -1.2
SMARCD1-208ENST00000550280 ENKURQ8TC29 256 aa7.53□□□□□ -1.2
SMARCD1-208ENST00000550280 SERTM2A0A1B0GWG4 89 aa7.52□□□□□ -1.21
SMARCD1-208ENST00000550280 A0A1W2PPV4 95 aa7.52□□□□□ -1.21
SMARCD1-208ENST00000550280 UPK1BO75841 260 aa7.52□□□□□ -1.21
SMARCD1-208ENST00000550280 OXTP01178 125 aa7.52□□□□□ -1.21
SMARCD1-208ENST00000550280 GCHFRP30047 84 aa7.52□□□□□ -1.21
SMARCD1-208ENST00000550280 CDC34P49427 236 aaPredicted RBP7.52□□□□□ -1.21
SMARCD1-208ENST00000550280 SMUG1Q53HV7 270 aa7.52□□□□□ -1.21
SMARCD1-208ENST00000550280 PRNTQ86SH4 94 aa7.52□□□□□ -1.21
SMARCD1-208ENST00000550280 RAB24Q969Q5 203 aa7.52□□□□□ -1.21
SMARCD1-208ENST00000550280 MARVELD1Q9BSK0 173 aa7.52□□□□□ -1.21
SMARCD1-208ENST00000550280 NDFIP1Q9BT67 221 aa7.52□□□□□ -1.21
SMARCD1-208ENST00000550280 EPDR1Q9UM22 224 aa7.52□□□□□ -1.21
SMARCD1-208ENST00000550280 TRAV34A0A0B4J273 112 aa7.51□□□□□ -1.21
SMARCD1-208ENST00000550280 RBFOX3A6NFN3 312 aa7.51□□□□□ -1.21
SMARCD1-208ENST00000550280 SUMO1P63165 101 aaKnown RBP7.51□□□□□ -1.21
SMARCD1-208ENST00000550280 PIK3CD-AS1Q5SR53 167 aa7.51□□□□□ -1.21
SMARCD1-208ENST00000550280 DMRTA1Q5VZB9 504 aa7.51□□□□□ -1.21
SMARCD1-208ENST00000550280 ATRAIDQ6UW56 229 aa7.51□□□□□ -1.21
SMARCD1-208ENST00000550280 KLK12Q9UKR0 248 aa7.51□□□□□ -1.21
SMARCD1-208ENST00000550280 IGKV2D-24A0A075B6R9 120 aa7.5□□□□□ -1.21
SMARCD1-208ENST00000550280 A8MWV9 139 aa7.5□□□□□ -1.21
SMARCD1-208ENST00000550280 CRIP1P50238 77 aa7.5□□□□□ -1.21
SMARCD1-208ENST00000550280 LGALSLQ3ZCW2 172 aaPredicted RBP7.5□□□□□ -1.21
SMARCD1-208ENST00000550280 LINC00299Q6ZSB3 139 aa7.5□□□□□ -1.21
SMARCD1-208ENST00000550280 Q8N976 141 aa7.5□□□□□ -1.21
SMARCD1-208ENST00000550280 OR2G3Q8NGZ4 309 aa7.5□□□□□ -1.21
SMARCD1-208ENST00000550280 DAZAP1Q96EP5 407 aaKnown RBP7.5□□□□□ -1.21
SMARCD1-208ENST00000550280 TNXBP22105 4242 aa7.49□□□□□ -1.21
SMARCD1-208ENST00000550280 H3BVH4 76 aa7.49□□□□□ -1.21
SMARCD1-208ENST00000550280 IGLV2-8P01709 118 aa7.49□□□□□ -1.21
SMARCD1-208ENST00000550280 TOR2AQ5JU69 321 aa7.49□□□□□ -1.21
SMARCD1-208ENST00000550280 HSD17B11Q8NBQ5 300 aa7.49□□□□□ -1.21
SMARCD1-208ENST00000550280 UBE2WQ96B02 151 aa7.49□□□□□ -1.21
SMARCD1-208ENST00000550280 SH3BGRL3Q9H299 93 aa7.49□□□□□ -1.21
SMARCD1-208ENST00000550280 IL36BQ9NZH7 164 aa7.49□□□□□ -1.21
SMARCD1-208ENST00000550280 NDUFA13Q9P0J0 144 aa7.49□□□□□ -1.21
SMARCD1-208ENST00000550280 COX11Q9Y6N1 276 aa7.49□□□□□ -1.21
SMARCD1-208ENST00000550280 ARL2-SNX15V9GYD0 113 aa7.49□□□□□ -1.21
SMARCD1-208ENST00000550280 A0A087WWC5 75 aa7.48□□□□□ -1.21
SMARCD1-208ENST00000550280 PANO1I0J062 215 aa7.48□□□□□ -1.21
SMARCD1-208ENST00000550280 PET100P0DJ07 73 aa7.48□□□□□ -1.21
SMARCD1-208ENST00000550280 MT1HL1P0DM35 61 aa7.48□□□□□ -1.21
SMARCD1-208ENST00000550280 ATP6V0CP27449 155 aa7.48□□□□□ -1.21
SMARCD1-208ENST00000550280 ASIPP42127 132 aa7.48□□□□□ -1.21
SMARCD1-208ENST00000550280 ZNF726P1Q15940 193 aa7.48□□□□□ -1.21
SMARCD1-208ENST00000550280 ENHOQ6UWT2 76 aa7.48□□□□□ -1.21
SMARCD1-208ENST00000550280 SYT8Q8NBV8 401 aa7.48□□□□□ -1.21
SMARCD1-208ENST00000550280 S100ZQ8WXG8 99 aa7.48□□□□□ -1.21
SMARCD1-208ENST00000550280 PLA2G2DQ9UNK4 145 aa7.48□□□□□ -1.21
SMARCD1-208ENST00000550280 A0A087WWL8 130 aa7.47□□□□□ -1.21
SMARCD1-208ENST00000550280 GRIFINA4D1Z8 144 aa7.47□□□□□ -1.21
SMARCD1-208ENST00000550280 KRBOX1C9JBD0 128 aa7.47□□□□□ -1.21
SMARCD1-208ENST00000550280 SSNA1O43805 119 aa7.47□□□□□ -1.21
SMARCD1-208ENST00000550280 ARMS2P0C7Q2 107 aa7.47□□□□□ -1.21
SMARCD1-208ENST00000550280 S100A4P26447 101 aaKnown RBP7.47□□□□□ -1.21
SMARCD1-208ENST00000550280 FGF8P55075 233 aaPredicted RBP7.47□□□□□ -1.21
SMARCD1-208ENST00000550280 ZFP69Q49AA0 526 aa7.47□□□□□ -1.21
SMARCD1-208ENST00000550280 DNLZQ5SXM8 178 aa7.47□□□□□ -1.21
SMARCD1-208ENST00000550280 Q86TA4 180 aa7.47□□□□□ -1.21
SMARCD1-208ENST00000550280 ZC2HC1AQ96GY0 325 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms