RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 GAGE4Q13068 117 aa6.77□□□□□ -1.33
VPS29-208ENST00000550267 GAGE5Q13069 117 aa6.77□□□□□ -1.33
VPS29-208ENST00000550267 GAGE13Q4V321 117 aa6.77□□□□□ -1.33
VPS29-208ENST00000550267 TMEM252Q8N6L7 170 aa6.77□□□□□ -1.33
VPS29-208ENST00000550267 ATP5SQ99766 215 aa6.77□□□□□ -1.33
VPS29-208ENST00000550267 BCL7BQ9BQE9 202 aa6.77□□□□□ -1.33
VPS29-208ENST00000550267 LYRM2Q9NU23 88 aaPredicted RBP6.77□□□□□ -1.33
VPS29-208ENST00000550267 TNXBP22105 4242 aa6.77□□□□□ -1.33
VPS29-208ENST00000550267 KRTAP23-1A1A580 65 aa6.76□□□□□ -1.33
VPS29-208ENST00000550267 NAP1L6A6NFF2 107 aa6.76□□□□□ -1.33
VPS29-208ENST00000550267 OR7C2O60412 319 aa6.76□□□□□ -1.33
VPS29-208ENST00000550267 LINC00694P0DN24 101 aa6.76□□□□□ -1.33
VPS29-208ENST00000550267 MGST1P10620 155 aaKnown RBP6.76□□□□□ -1.33
VPS29-208ENST00000550267 INPP1P49441 399 aa6.76□□□□□ -1.33
VPS29-208ENST00000550267 HBG1P69891 147 aa6.76□□□□□ -1.33
VPS29-208ENST00000550267 HBG2P69892 147 aa6.76□□□□□ -1.33
VPS29-208ENST00000550267 ATP6V1FQ16864 119 aa6.76□□□□□ -1.33
VPS29-208ENST00000550267 SPANXN2Q5MJ10 180 aa6.76□□□□□ -1.33
VPS29-208ENST00000550267 STX12Q86Y82 276 aa6.76□□□□□ -1.33
VPS29-208ENST00000550267 THAP6Q8TBB0 222 aa6.76□□□□□ -1.33
VPS29-208ENST00000550267 TMED6Q8WW62 240 aa6.76□□□□□ -1.33
VPS29-208ENST00000550267 ASB13Q8WXK3 278 aa6.76□□□□□ -1.33
VPS29-208ENST00000550267 TVP23CQ96ET8 276 aa6.76□□□□□ -1.33
VPS29-208ENST00000550267 KCNS1Q96KK3 526 aa6.76□□□□□ -1.33
VPS29-208ENST00000550267 HYLS1Q96M11 299 aa6.76□□□□□ -1.33
VPS29-208ENST00000550267 KLK12Q9UKR0 248 aa6.76□□□□□ -1.33
VPS29-208ENST00000550267 PGPEP1LA6NFU8 196 aa6.75□□□□□ -1.33
VPS29-208ENST00000550267 PVALBP20472 110 aaPredicted RBP6.75□□□□□ -1.33
VPS29-208ENST00000550267 BTCP35070 178 aa6.75□□□□□ -1.33
VPS29-208ENST00000550267 S100A10P60903 97 aa6.75□□□□□ -1.33
VPS29-208ENST00000550267 UBE2L3P68036 154 aaKnown RBP6.75□□□□□ -1.33
VPS29-208ENST00000550267 ZNF506Q5JVG8 444 aa6.75□□□□□ -1.33
VPS29-208ENST00000550267 Q6ZRU5 148 aa6.75□□□□□ -1.33
VPS29-208ENST00000550267 UBE2WQ96B02 151 aa6.75□□□□□ -1.33
VPS29-208ENST00000550267 SH3BGRL3Q9H299 93 aa6.75□□□□□ -1.33
VPS29-208ENST00000550267 Q9UF83 564 aa6.75□□□□□ -1.33
VPS29-208ENST00000550267 NOL3O60936 208 aaKnown RBP6.74□□□□□ -1.33
VPS29-208ENST00000550267 RAB32Q13637 225 aa6.74□□□□□ -1.33
VPS29-208ENST00000550267 GOLT1AQ6ZVE7 132 aa6.74□□□□□ -1.33
VPS29-208ENST00000550267 NIT1Q86X76 327 aa6.74□□□□□ -1.33
VPS29-208ENST00000550267 CYB561D1Q8N8Q1 229 aa6.74□□□□□ -1.33
VPS29-208ENST00000550267 C2orf50Q96LR7 162 aa6.74□□□□□ -1.33
VPS29-208ENST00000550267 C9orf85Q96MD7 179 aa6.74□□□□□ -1.33
VPS29-208ENST00000550267 TREM1Q9NP99 234 aa6.74□□□□□ -1.33
VPS29-208ENST00000550267 URGCP-MRPS24S4R325 110 aa6.74□□□□□ -1.33
VPS29-208ENST00000550267 A0A087WWC5 75 aa6.73□□□□□ -1.33
VPS29-208ENST00000550267 PGPA6NDG6 321 aa6.73□□□□□ -1.33
VPS29-208ENST00000550267 PANO1I0J062 215 aa6.73□□□□□ -1.33
VPS29-208ENST00000550267 S100A5P33763 92 aa6.73□□□□□ -1.33
VPS29-208ENST00000550267 TRIQKQ629K1 86 aa6.73□□□□□ -1.33
VPS29-208ENST00000550267 TMEM75Q8N9X5 138 aa6.73□□□□□ -1.33
VPS29-208ENST00000550267 OR2T35Q8NGX2 323 aa6.73□□□□□ -1.33
VPS29-208ENST00000550267 SAMD10Q9BYL1 202 aa6.73□□□□□ -1.33
VPS29-208ENST00000550267 NMES1Q9C002 83 aa6.73□□□□□ -1.33
VPS29-208ENST00000550267 PARLQ9H300 379 aa6.73□□□□□ -1.33
VPS29-208ENST00000550267 EIF3GO75821 320 aaKnown RBP eCLIP6.72□□□□□ -1.33
VPS29-208ENST00000550267 SEC11BP0C7V7 166 aa6.72□□□□□ -1.33
VPS29-208ENST00000550267 ZNF80P51504 273 aaPredicted RBP6.72□□□□□ -1.33
VPS29-208ENST00000550267 NHLH2Q02577 135 aa6.72□□□□□ -1.33
VPS29-208ENST00000550267 ODF1Q14990 250 aa6.72□□□□□ -1.33
VPS29-208ENST00000550267 C14orf177Q52M58 125 aa6.72□□□□□ -1.33
VPS29-208ENST00000550267 ATRAIDQ6UW56 229 aa6.72□□□□□ -1.33
VPS29-208ENST00000550267 C14orf178Q8N769 122 aaPredicted RBP6.72□□□□□ -1.33
VPS29-208ENST00000550267 CMTM2Q8TAZ6 248 aa6.72□□□□□ -1.33
VPS29-208ENST00000550267 PTH2Q96A98 100 aa6.72□□□□□ -1.33
VPS29-208ENST00000550267 OTORQ9NRC9 128 aa6.72□□□□□ -1.33
VPS29-208ENST00000550267 GNG5P63218 68 aa6.71□□□□□ -1.34
VPS29-208ENST00000550267 IL15RAQ13261 267 aa6.71□□□□□ -1.34
VPS29-208ENST00000550267 OR5C1Q8NGR4 320 aa6.71□□□□□ -1.34
VPS29-208ENST00000550267 SGK494Q96LW2 274 aa6.71□□□□□ -1.34
VPS29-208ENST00000550267 LINC00479Q96M42 142 aa6.71□□□□□ -1.34
VPS29-208ENST00000550267 SEC22CQ9BRL7 303 aa6.71□□□□□ -1.34
VPS29-208ENST00000550267 A0A087WX48 190 aa6.7□□□□□ -1.34
VPS29-208ENST00000550267 CENPXA8MT69 81 aa6.7□□□□□ -1.34
VPS29-208ENST00000550267 USP17L23D6RBM5 183 aa6.7□□□□□ -1.34
VPS29-208ENST00000550267 RNASE3P12724 160 aaKnown RBP6.7□□□□□ -1.34
VPS29-208ENST00000550267 FGF8P55075 233 aaPredicted RBP6.7□□□□□ -1.34
VPS29-208ENST00000550267 ELOBQ15370 118 aa6.7□□□□□ -1.34
VPS29-208ENST00000550267 KHDC3LQ587J8 217 aa6.7□□□□□ -1.34
VPS29-208ENST00000550267 ZFP2Q6ZN57 461 aa6.7□□□□□ -1.34
VPS29-208ENST00000550267 OR10G9Q8NGN4 311 aa6.7□□□□□ -1.34
VPS29-208ENST00000550267 C1orf43Q9BWL3 253 aa6.7□□□□□ -1.34
VPS29-208ENST00000550267 WDR61Q9GZS3 305 aaKnown RBP6.7□□□□□ -1.34
VPS29-208ENST00000550267 JPT2Q9H910 190 aa6.7□□□□□ -1.34
VPS29-208ENST00000550267 KCNIP2Q9NS61 270 aa6.7□□□□□ -1.34
VPS29-208ENST00000550267 MBD2Q9UBB5 411 aa6.7□□□□□ -1.34
VPS29-208ENST00000550267 A0A0D9SG52 128 aa6.69□□□□□ -1.34
VPS29-208ENST00000550267 A8MWV9 139 aa6.69□□□□□ -1.34
VPS29-208ENST00000550267 TAAR5O14804 337 aa6.69□□□□□ -1.34
VPS29-208ENST00000550267 GCGP01275 180 aa6.69□□□□□ -1.34
VPS29-208ENST00000550267 PRSS1P07477 247 aa6.69□□□□□ -1.34
VPS29-208ENST00000550267 Q0VG73 95 aa6.69□□□□□ -1.34
VPS29-208ENST00000550267 CNPY1Q3B7I2 92 aa6.69□□□□□ -1.34
VPS29-208ENST00000550267 LGALSLQ3ZCW2 172 aaPredicted RBP6.69□□□□□ -1.34
VPS29-208ENST00000550267 FFAR4Q5NUL3 377 aa6.69□□□□□ -1.34
VPS29-208ENST00000550267 FAM74A1Q5RGS3 127 aa6.69□□□□□ -1.34
VPS29-208ENST00000550267 UFSP1Q6NVU6 142 aa6.69□□□□□ -1.34
VPS29-208ENST00000550267 ENHOQ6UWT2 76 aa6.69□□□□□ -1.34
VPS29-208ENST00000550267 C9orf163Q8N9P6 203 aa6.69□□□□□ -1.34
VPS29-208ENST00000550267 SDHCQ99643 169 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms