RNA–Protein interactions for RNA: ENST00000550104.5

ATXN2-219, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-219ENST00000550104 C2CD3Q4AC94 2353 aa12.97□□□□□ -0.33
ATXN2-219ENST00000550104 LGALS9BQ3B8N2 356 aa12.97□□□□□ -0.33
ATXN2-219ENST00000550104 LGALS9CQ6DKI2 356 aa12.97□□□□□ -0.33
ATXN2-219ENST00000550104 ZNF815PA8K554 130 aa12.97□□□□□ -0.33
ATXN2-219ENST00000550104 APOMO95445 188 aa12.96□□□□□ -0.33
ATXN2-219ENST00000550104 C2orf66Q6UXQ4 117 aa12.96□□□□□ -0.33
ATXN2-219ENST00000550104 MRGPRG-AS1Q2M3A8 158 aa12.96□□□□□ -0.34
ATXN2-219ENST00000550104 IGKV3OR2-268A0A0C4DH90 116 aa12.95□□□□□ -0.34
ATXN2-219ENST00000550104 CD5LO43866 347 aa12.95□□□□□ -0.34
ATXN2-219ENST00000550104 SMIM2Q9BVW6 85 aa12.95□□□□□ -0.34
ATXN2-219ENST00000550104 KNCNA6PVL3 124 aa12.95□□□□□ -0.34
ATXN2-219ENST00000550104 PLNP26678 52 aa12.95□□□□□ -0.34
ATXN2-219ENST00000550104 SMAD5-AS1Q9Y6J3 95 aa12.95□□□□□ -0.34
ATXN2-219ENST00000550104 IGHV3-64A0A075B6Q5 118 aa12.95□□□□□ -0.34
ATXN2-219ENST00000550104 A6NDX4 124 aa12.95□□□□□ -0.34
ATXN2-219ENST00000550104 UBE2L6O14933 153 aa12.95□□□□□ -0.34
ATXN2-219ENST00000550104 HOXD3P31249 432 aaPredicted RBP12.95□□□□□ -0.34
ATXN2-219ENST00000550104 KIR3DS1Q14943 382 aa12.95□□□□□ -0.34
ATXN2-219ENST00000550104 NSUN5P1Q3KNT7 163 aa12.95□□□□□ -0.34
ATXN2-219ENST00000550104 LENEPQ9Y5L5 61 aa12.95□□□□□ -0.34
ATXN2-219ENST00000550104 ELANEP08246 267 aa12.95□□□□□ -0.34
ATXN2-219ENST00000550104 COX8AP10176 69 aa12.95□□□□□ -0.34
ATXN2-219ENST00000550104 UBE2E2Q96LR5 201 aa12.95□□□□□ -0.34
ATXN2-219ENST00000550104 C2orf70A6NJV1 201 aa12.94□□□□□ -0.34
ATXN2-219ENST00000550104 CTRLP40313 264 aa12.94□□□□□ -0.34
ATXN2-219ENST00000550104 VWC2LB2RUY7 222 aa12.94□□□□□ -0.34
ATXN2-219ENST00000550104 K7EP13 123 aa12.94□□□□□ -0.34
ATXN2-219ENST00000550104 ZFAND3Q9H8U3 227 aa12.94□□□□□ -0.34
ATXN2-219ENST00000550104 MRPL35Q9NZE8 188 aaKnown RBP12.94□□□□□ -0.34
ATXN2-219ENST00000550104 SAP30O75446 220 aa12.93□□□□□ -0.34
ATXN2-219ENST00000550104 RNF114Q9Y508 228 aa12.93□□□□□ -0.34
ATXN2-219ENST00000550104 LINC01619G3V211 115 aa12.93□□□□□ -0.34
ATXN2-219ENST00000550104 C9orf47Q6ZRZ4 202 aa12.93□□□□□ -0.34
ATXN2-219ENST00000550104 IGHV1OR15-1A0A075B7D0 117 aa12.93□□□□□ -0.34
ATXN2-219ENST00000550104 LOXL1Q08397 574 aaPredicted RBP12.93□□□□□ -0.34
ATXN2-219ENST00000550104 ZNF479Q96JC4 524 aa12.93□□□□□ -0.34
ATXN2-219ENST00000550104 TSSC4Q9Y5U2 329 aaPredicted RBP12.93□□□□□ -0.34
ATXN2-219ENST00000550104 TRGV2A0A075B6R0 118 aa12.93□□□□□ -0.34
ATXN2-219ENST00000550104 CD28P10747 220 aa12.92□□□□□ -0.34
ATXN2-219ENST00000550104 LINC00310P59036 64 aa12.92□□□□□ -0.34
ATXN2-219ENST00000550104 ZNF462Q96JM2 2506 aa12.92□□□□□ -0.34
ATXN2-219ENST00000550104 TP53TG1Q9Y2A0 90 aa12.92□□□□□ -0.34
ATXN2-219ENST00000550104 PRSS47A8MTI9 375 aa12.92□□□□□ -0.34
ATXN2-219ENST00000550104 ADAMTSL5Q6ZMM2 481 aa12.92□□□□□ -0.34
ATXN2-219ENST00000550104 GAGE13Q4V321 117 aa12.92□□□□□ -0.34
ATXN2-219ENST00000550104 Q71RC1 249 aaPredicted RBP12.92□□□□□ -0.34
ATXN2-219ENST00000550104 HIVEP2P31629 2446 aa12.91□□□□□ -0.34
ATXN2-219ENST00000550104 SDHAF1A6NFY7 115 aa12.91□□□□□ -0.34
ATXN2-219ENST00000550104 DEFB113Q30KQ7 82 aa12.91□□□□□ -0.34
ATXN2-219ENST00000550104 DSPP15924 2871 aaKnown RBP12.91□□□□□ -0.34
ATXN2-219ENST00000550104 IGKV3D-20A0A0C4DH25 116 aa12.91□□□□□ -0.34
ATXN2-219ENST00000550104 AZU1P20160 251 aa12.91□□□□□ -0.34
ATXN2-219ENST00000550104 LINC01545Q5VT33 79 aa12.91□□□□□ -0.34
ATXN2-219ENST00000550104 XCL2Q9UBD3 114 aa12.91□□□□□ -0.34
ATXN2-219ENST00000550104 TRAV8-2A0A0B4J237 113 aa12.9□□□□□ -0.34
ATXN2-219ENST00000550104 LGALS1P09382 135 aaKnown RBP12.9□□□□□ -0.34
ATXN2-219ENST00000550104 CHAC1Q9BUX1 264 aa12.9□□□□□ -0.34
ATXN2-219ENST00000550104 RPL39LQ96EH5 51 aaKnown RBP12.9□□□□□ -0.34
ATXN2-219ENST00000550104 ZNF415Q09FC8 603 aa12.9□□□□□ -0.34
ATXN2-219ENST00000550104 C19orf54Q5BKX5 351 aa12.9□□□□□ -0.34
ATXN2-219ENST00000550104 NACAE9PAV3 2078 aa12.9□□□□□ -0.35
ATXN2-219ENST00000550104 ANKRD39Q53RE8 183 aa12.89□□□□□ -0.35
ATXN2-219ENST00000550104 ZNF493Q6ZR52 646 aa12.89□□□□□ -0.35
ATXN2-219ENST00000550104 TRGV1A0A0A0MS02 117 aa12.89□□□□□ -0.35
ATXN2-219ENST00000550104 IGHV3-53P01767 116 aa12.89□□□□□ -0.35
ATXN2-219ENST00000550104 SLURP1P55000 103 aa12.89□□□□□ -0.35
ATXN2-219ENST00000550104 SPINK8P0C7L1 97 aa12.89□□□□□ -0.35
ATXN2-219ENST00000550104 ATP6V0BQ99437 205 aa12.89□□□□□ -0.35
ATXN2-219ENST00000550104 IGF1P05019 195 aa12.89□□□□□ -0.35
ATXN2-219ENST00000550104 PCP2Q8IVA1 136 aa12.89□□□□□ -0.35
ATXN2-219ENST00000550104 ETDBQ3ZM63 59 aa12.88□□□□□ -0.35
ATXN2-219ENST00000550104 BVES-AS1Q5T3Y7 98 aa12.88□□□□□ -0.35
ATXN2-219ENST00000550104 IGHV4OR15-8A0A075B7B6 117 aa12.88□□□□□ -0.35
ATXN2-219ENST00000550104 A0A087WW49 117 aa12.88□□□□□ -0.35
ATXN2-219ENST00000550104 ABCA12Q86UK0 2595 aa12.88□□□□□ -0.35
ATXN2-219ENST00000550104 INSP01308 110 aa12.87□□□□□ -0.35
ATXN2-219ENST00000550104 LINC01549A6NIU2 74 aa12.87□□□□□ -0.35
ATXN2-219ENST00000550104 RPL35AP18077 110 aaKnown RBP12.87□□□□□ -0.35
ATXN2-219ENST00000550104 PHLDA1Q8WV24 401 aaPredicted RBP12.87□□□□□ -0.35
ATXN2-219ENST00000550104 IGLC6P0CF74 106 aa12.87□□□□□ -0.35
ATXN2-219ENST00000550104 TRPT1Q86TN4 253 aaKnown RBP12.86□□□□□ -0.35
ATXN2-219ENST00000550104 C20orf78Q9BR46 151 aa12.86□□□□□ -0.35
ATXN2-219ENST00000550104 TNRC18O15417 2968 aaPredicted RBP12.86□□□□□ -0.35
ATXN2-219ENST00000550104 F8W735 103 aaPredicted RBP12.85□□□□□ -0.35
ATXN2-219ENST00000550104 Q6ZS46 218 aa12.85□□□□□ -0.35
ATXN2-219ENST00000550104 TP73-AS1Q9UF72 201 aa12.85□□□□□ -0.35
ATXN2-219ENST00000550104 PRRC2AP48634 2157 aaKnown RBP12.85□□□□□ -0.35
ATXN2-219ENST00000550104 IGHV3-16A0A0C4DH30 117 aa12.85□□□□□ -0.35
ATXN2-219ENST00000550104 C20orf173Q96LM9 149 aa12.85□□□□□ -0.35
ATXN2-219ENST00000550104 CITED1Q99966 193 aa12.85□□□□□ -0.35
ATXN2-219ENST00000550104 EPG5Q9HCE0 2579 aa12.85□□□□□ -0.35
ATXN2-219ENST00000550104 MRPS12O15235 138 aaKnown RBP12.85□□□□□ -0.35
ATXN2-219ENST00000550104 TSPAN13O95857 204 aa12.85□□□□□ -0.35
ATXN2-219ENST00000550104 MEIG1Q5JSS6 88 aa12.85□□□□□ -0.35
ATXN2-219ENST00000550104 C10orf99Q6UWK7 81 aa12.85□□□□□ -0.35
ATXN2-219ENST00000550104 GPHB5Q86YW7 130 aa12.85□□□□□ -0.35
ATXN2-219ENST00000550104 F8VRH5 84 aa12.84□□□□□ -0.35
ATXN2-219ENST00000550104 TRAV2A0A0B4J234 112 aa12.84□□□□□ -0.35
ATXN2-219ENST00000550104 USP34Q70CQ2 3546 aa12.84□□□□□ -0.35
ATXN2-219ENST00000550104 FREM2Q5SZK8 3169 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms