RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 RHOHQ15669 191 aa1.05□□□□□ -2.24
CCDC38-208ENST00000549876 SPANXN1Q5VSR9 72 aa1.05□□□□□ -2.24
CCDC38-208ENST00000549876 OR2T2Q6IF00 324 aa1.05□□□□□ -2.24
CCDC38-208ENST00000549876 PLPP5Q8NEB5 264 aa1.05□□□□□ -2.24
CCDC38-208ENST00000549876 LINC00526Q96FQ7 95 aa1.05□□□□□ -2.24
CCDC38-208ENST00000549876 AGPAT4-IT1Q9H0P7 198 aa1.05□□□□□ -2.24
CCDC38-208ENST00000549876 BOKQ9UMX3 212 aaPredicted RBP1.05□□□□□ -2.24
CCDC38-208ENST00000549876 ZFP30Q9Y2G7 519 aa1.05□□□□□ -2.24
CCDC38-208ENST00000549876 TRPM7Q96QT4 1865 aa1.05□□□□□ -2.24
CCDC38-208ENST00000549876 ALPK3Q96L96 1907 aa1.05□□□□□ -2.24
CCDC38-208ENST00000549876 A2ML1A8K2U0 1454 aa1.05□□□□□ -2.24
CCDC38-208ENST00000549876 EML5Q05BV3 1969 aa1.05□□□□□ -2.24
CCDC38-208ENST00000549876 MAPKBP1O60336 1514 aa1.05□□□□□ -2.24
CCDC38-208ENST00000549876 MYO18AQ92614 2054 aaKnown RBP1.04□□□□□ -2.24
CCDC38-208ENST00000549876 PLXNA2O75051 1894 aa1.04□□□□□ -2.24
CCDC38-208ENST00000549876 C20orf202A1L168 122 aa1.04□□□□□ -2.24
CCDC38-208ENST00000549876 PITX3O75364 302 aa1.04□□□□□ -2.24
CCDC38-208ENST00000549876 NDUFB6O95139 128 aa1.04□□□□□ -2.24
CCDC38-208ENST00000549876 ARL14EPLP0DKL9 152 aa1.04□□□□□ -2.24
CCDC38-208ENST00000549876 POLR2JP52435 117 aaKnown RBP1.04□□□□□ -2.24
CCDC38-208ENST00000549876 Q56UQ5 140 aa1.04□□□□□ -2.24
CCDC38-208ENST00000549876 GDF5OSQ5U4N7 250 aa1.04□□□□□ -2.24
CCDC38-208ENST00000549876 MIC13Q5XKP0 118 aa1.04□□□□□ -2.24
CCDC38-208ENST00000549876 C12orf73Q69YU5 71 aa1.04□□□□□ -2.24
CCDC38-208ENST00000549876 LINC00322Q6ZN03 302 aaPredicted RBP1.04□□□□□ -2.24
CCDC38-208ENST00000549876 NDUFA11Q86Y39 141 aa1.04□□□□□ -2.24
CCDC38-208ENST00000549876 TMEM14CQ9P0S9 112 aa1.04□□□□□ -2.24
CCDC38-208ENST00000549876 IER3IP1Q9Y5U9 82 aa1.04□□□□□ -2.24
CCDC38-208ENST00000549876 SERP1Q9Y6X1 66 aa1.04□□□□□ -2.24
CCDC38-208ENST00000549876 CITO14578 2027 aa1.04□□□□□ -2.24
CCDC38-208ENST00000549876 KTN1Q86UP2 1357 aaKnown RBP1.04□□□□□ -2.24
CCDC38-208ENST00000549876 MYOM2P54296 1465 aa1.04□□□□□ -2.24
CCDC38-208ENST00000549876 SMARCA2P51531 1590 aa1.04□□□□□ -2.24
CCDC38-208ENST00000549876 TNRC6BQ9UPQ9 1833 aaKnown RBP1.03□□□□□ -2.24
CCDC38-208ENST00000549876 PTPRDP23468 1912 aa1.03□□□□□ -2.24
CCDC38-208ENST00000549876 EXPH5Q8NEV8 1989 aa1.03□□□□□ -2.24
CCDC38-208ENST00000549876 MYOFQ9NZM1 2061 aa1.03□□□□□ -2.24
CCDC38-208ENST00000549876 INTS1Q8N201 2190 aaKnown RBP1.03□□□□□ -2.24
CCDC38-208ENST00000549876 TRBV6-7A0A0A0MS04 114 aa1.03□□□□□ -2.24
CCDC38-208ENST00000549876 LOC100130705A0A1B0GUX0 176 aa1.03□□□□□ -2.24
CCDC38-208ENST00000549876 TMEM30CPA0ZSE6 113 aa1.03□□□□□ -2.24
CCDC38-208ENST00000549876 IGKV2-29A2NJV5 120 aaPredicted RBP1.03□□□□□ -2.24
CCDC38-208ENST00000549876 APOC4-APOC2K7ER74 178 aa1.03□□□□□ -2.24
CCDC38-208ENST00000549876 M0R129 80 aa1.03□□□□□ -2.24
CCDC38-208ENST00000549876 IGHV3-30P01768 117 aa1.03□□□□□ -2.24
CCDC38-208ENST00000549876 APOC2P02655 101 aa1.03□□□□□ -2.24
CCDC38-208ENST00000549876 GYPBP06028 91 aa1.03□□□□□ -2.24
CCDC38-208ENST00000549876 IGHV3-30-5P0DP03 117 aa1.03□□□□□ -2.24
CCDC38-208ENST00000549876 RBP2P50120 134 aa1.03□□□□□ -2.24
CCDC38-208ENST00000549876 TPPP2P59282 170 aa1.03□□□□□ -2.24
CCDC38-208ENST00000549876 PPP3R1P63098 170 aa1.03□□□□□ -2.24
CCDC38-208ENST00000549876 Q6AWC8 147 aa1.03□□□□□ -2.24
CCDC38-208ENST00000549876 UNQ5815/PRO19632Q6UWF5 114 aa1.03□□□□□ -2.24
CCDC38-208ENST00000549876 SPTSSAQ969W0 71 aa1.03□□□□□ -2.24
CCDC38-208ENST00000549876 C14orf144Q96I85 54 aa1.03□□□□□ -2.24
CCDC38-208ENST00000549876 MRPL57Q9BQC6 102 aaKnown RBP1.03□□□□□ -2.24
CCDC38-208ENST00000549876 RPRMQ9NS64 109 aa1.03□□□□□ -2.24
CCDC38-208ENST00000549876 CCNB3Q8WWL7 1395 aa1.03□□□□□ -2.24
CCDC38-208ENST00000549876 DAPK1P53355 1430 aa1.03□□□□□ -2.24
CCDC38-208ENST00000549876 VPS8Q8N3P4 1428 aa1.03□□□□□ -2.24
CCDC38-208ENST00000549876 CUL7Q14999 1698 aa1.03□□□□□ -2.24
CCDC38-208ENST00000549876 SDK1Q7Z5N4 2213 aa1.03□□□□□ -2.25
CCDC38-208ENST00000549876 TRBV10-1A0A0K0K1A3 114 aa1.02□□□□□ -2.25
CCDC38-208ENST00000549876 MCRIP1C9JLW8 97 aa1.02□□□□□ -2.25
CCDC38-208ENST00000549876 JMJD7-PLA2G4BH0Y9G9 81 aa1.02□□□□□ -2.25
CCDC38-208ENST00000549876 SNAPC5O75971 98 aa1.02□□□□□ -2.25
CCDC38-208ENST00000549876 SNCGO76070 127 aa1.02□□□□□ -2.25
CCDC38-208ENST00000549876 DNAL4O96015 105 aa1.02□□□□□ -2.25
CCDC38-208ENST00000549876 S100A8P05109 93 aa1.02□□□□□ -2.25
CCDC38-208ENST00000549876 IL5P05113 134 aa1.02□□□□□ -2.25
CCDC38-208ENST00000549876 SPRNQ5BIV9 151 aa1.02□□□□□ -2.25
CCDC38-208ENST00000549876 ARFGEF3Q5TH69 2177 aa1.02□□□□□ -2.25
CCDC38-208ENST00000549876 GTF2H5Q6ZYL4 71 aa1.02□□□□□ -2.25
CCDC38-208ENST00000549876 TNRC6AQ8NDV7 1962 aaKnown RBP1.02□□□□□ -2.25
CCDC38-208ENST00000549876 DMAC1Q96GE9 116 aa1.02□□□□□ -2.25
CCDC38-208ENST00000549876 SEC11CQ9BY50 192 aa1.02□□□□□ -2.25
CCDC38-208ENST00000549876 TMEM242Q9NWH2 141 aa1.02□□□□□ -2.25
CCDC38-208ENST00000549876 LAMB1P07942 1786 aa1.01□□□□□ -2.25
CCDC38-208ENST00000549876 CASZ1Q86V15 1759 aa1.01□□□□□ -2.25
CCDC38-208ENST00000549876 QRICH2Q9H0J4 1663 aa1.01□□□□□ -2.25
CCDC38-208ENST00000549876 KDM6BO15054 1643 aa1.01□□□□□ -2.25
CCDC38-208ENST00000549876 KLF7O75840 302 aaPredicted RBP1.01□□□□□ -2.25
CCDC38-208ENST00000549876 PPYP01298 95 aa1.01□□□□□ -2.25
CCDC38-208ENST00000549876 PIRTP0C851 137 aa1.01□□□□□ -2.25
CCDC38-208ENST00000549876 PDE6GP18545 87 aa1.01□□□□□ -2.25
CCDC38-208ENST00000549876 MRPL54Q6P161 138 aaKnown RBP1.01□□□□□ -2.25
CCDC38-208ENST00000549876 LYPD5Q6UWN5 251 aa1.01□□□□□ -2.25
CCDC38-208ENST00000549876 C8orf59Q8N0T1 100 aaPredicted RBP1.01□□□□□ -2.25
CCDC38-208ENST00000549876 ACBD7Q8N6N7 88 aa1.01□□□□□ -2.25
CCDC38-208ENST00000549876 C10orf105Q8TEF2 133 aa1.01□□□□□ -2.25
CCDC38-208ENST00000549876 TMEM141Q96I45 108 aa1.01□□□□□ -2.25
CCDC38-208ENST00000549876 OBSCN-AS1Q96MR7 158 aa1.01□□□□□ -2.25
CCDC38-208ENST00000549876 ATG5Q9H1Y0 275 aa1.01□□□□□ -2.25
CCDC38-208ENST00000549876 C22orf24Q9Y442 160 aa1.01□□□□□ -2.25
CCDC38-208ENST00000549876 BCORL1Q5H9F3 1711 aa1.01□□□□□ -2.25
CCDC38-208ENST00000549876 LRP5O75197 1615 aa1□□□□□ -2.25
CCDC38-208ENST00000549876 NRKQ7Z2Y5 1582 aa1□□□□□ -2.25
CCDC38-208ENST00000549876 UNC13CQ8NB66 2214 aa1□□□□□ -2.25
CCDC38-208ENST00000549876 MCM3APO60318 1980 aa1□□□□□ -2.25
CCDC38-208ENST00000549876 TRAV17A0A0B4J275 112 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms