RNA–Protein interactions for RNA: ENST00000548749.5

RBFOX1-211, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 4

Gene RBFOX1, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-211ENST00000548749 COX8CQ7Z4L0 72 aa13.73□□□□□ -0.21
RBFOX1-211ENST00000548749 MANBALQ9NQG1 85 aa13.73□□□□□ -0.21
RBFOX1-211ENST00000548749 DNAH2Q9P225 4427 aa13.72□□□□□ -0.21
RBFOX1-211ENST00000548749 TEX46H3BTG2 121 aa13.72□□□□□ -0.21
RBFOX1-211ENST00000548749 K7EQD1 137 aa13.72□□□□□ -0.21
RBFOX1-211ENST00000548749 S100A9P06702 114 aaKnown RBP13.72□□□□□ -0.21
RBFOX1-211ENST00000548749 CFAP126Q5VTH2 177 aa13.72□□□□□ -0.21
RBFOX1-211ENST00000548749 NEGR1Q7Z3B1 354 aa13.72□□□□□ -0.21
RBFOX1-211ENST00000548749 IGHV3-73A0A0B4J1V6 119 aa13.71□□□□□ -0.21
RBFOX1-211ENST00000548749 TRAV1-1A0A0B4J248 108 aa13.71□□□□□ -0.21
RBFOX1-211ENST00000548749 GRIFINA4D1Z8 144 aa13.71□□□□□ -0.21
RBFOX1-211ENST00000548749 KRBOX1C9JBD0 128 aa13.71□□□□□ -0.21
RBFOX1-211ENST00000548749 RS1O15537 224 aa13.71□□□□□ -0.21
RBFOX1-211ENST00000548749 ZNF674Q2M3X9 581 aa13.71□□□□□ -0.21
RBFOX1-211ENST00000548749 C9orf62Q8N4C0 152 aa13.71□□□□□ -0.21
RBFOX1-211ENST00000548749 TMSB15BA0A087X1C1 80 aa13.7□□□□□ -0.22
RBFOX1-211ENST00000548749 LOC100131303A0A0U1RQF7 123 aa13.7□□□□□ -0.22
RBFOX1-211ENST00000548749 H3BVH4 76 aa13.7□□□□□ -0.22
RBFOX1-211ENST00000548749 GATA1P15976 413 aaPredicted RBP13.7□□□□□ -0.22
RBFOX1-211ENST00000548749 TTC32Q5I0X7 151 aa13.7□□□□□ -0.22
RBFOX1-211ENST00000548749 LYPD5Q6UWN5 251 aa13.7□□□□□ -0.22
RBFOX1-211ENST00000548749 C6orf223Q8N319 242 aa13.7□□□□□ -0.22
RBFOX1-211ENST00000548749 PTH2Q96A98 100 aa13.7□□□□□ -0.22
RBFOX1-211ENST00000548749 NXPH4O95158 308 aa13.69□□□□□ -0.22
RBFOX1-211ENST00000548749 BAGE2Q86Y30 109 aa13.69□□□□□ -0.22
RBFOX1-211ENST00000548749 IL36BQ9NZH7 164 aa13.69□□□□□ -0.22
RBFOX1-211ENST00000548749 ARMS2P0C7Q2 107 aa13.68□□□□□ -0.22
RBFOX1-211ENST00000548749 LINC01559Q495D7 138 aa13.68□□□□□ -0.22
RBFOX1-211ENST00000548749 TXNDC17Q9BRA2 123 aa13.68□□□□□ -0.22
RBFOX1-211ENST00000548749 KRTAP1-5Q9BYS1 174 aa13.68□□□□□ -0.22
RBFOX1-211ENST00000548749 DNAH17Q9UFH2 4485 aa13.67□□□□□ -0.22
RBFOX1-211ENST00000548749 A0A1B0GVY2 172 aa13.67□□□□□ -0.22
RBFOX1-211ENST00000548749 SIVA1O15304 175 aa13.67□□□□□ -0.22
RBFOX1-211ENST00000548749 CIDEAO60543 219 aa13.67□□□□□ -0.22
RBFOX1-211ENST00000548749 SLC25A29Q8N8R3 303 aa13.67□□□□□ -0.22
RBFOX1-211ENST00000548749 FAT2Q9NYQ8 4349 aa13.67□□□□□ -0.22
RBFOX1-211ENST00000548749 A0A1B0GVG6 124 aa13.66□□□□□ -0.22
RBFOX1-211ENST00000548749 IFNA1P01562 189 aa13.66□□□□□ -0.22
RBFOX1-211ENST00000548749 RPL35P42766 123 aaKnown RBP13.66□□□□□ -0.22
RBFOX1-211ENST00000548749 DNLZQ5SXM8 178 aa13.66□□□□□ -0.22
RBFOX1-211ENST00000548749 PRADC1Q9BSG0 188 aa13.66□□□□□ -0.22
RBFOX1-211ENST00000548749 HECTD4Q9Y4D8 3996 aa13.66□□□□□ -0.22
RBFOX1-211ENST00000548749 A8MWV9 139 aa13.65□□□□□ -0.22
RBFOX1-211ENST00000548749 PRR27Q6MZM9 219 aa13.65□□□□□ -0.22
RBFOX1-211ENST00000548749 SYT8Q8NBV8 401 aa13.65□□□□□ -0.22
RBFOX1-211ENST00000548749 C11orf52Q96A22 123 aa13.65□□□□□ -0.22
RBFOX1-211ENST00000548749 DERL1Q9BUN8 251 aa13.65□□□□□ -0.22
RBFOX1-211ENST00000548749 PARLQ9H300 379 aa13.65□□□□□ -0.22
RBFOX1-211ENST00000548749 JPT2Q9H910 190 aa13.65□□□□□ -0.22
RBFOX1-211ENST00000548749 TRBV6-4A0A1B0GX49 114 aa13.64□□□□□ -0.23
RBFOX1-211ENST00000548749 A0A1W2PPQ1 181 aa13.64□□□□□ -0.23
RBFOX1-211ENST00000548749 RPL19P84098 196 aaKnown RBP13.64□□□□□ -0.23
RBFOX1-211ENST00000548749 RHOHQ15669 191 aa13.64□□□□□ -0.23
RBFOX1-211ENST00000548749 PIK3CD-AS1Q5SR53 167 aa13.64□□□□□ -0.23
RBFOX1-211ENST00000548749 DMRTA1Q5VZB9 504 aa13.64□□□□□ -0.23
RBFOX1-211ENST00000548749 MLST8Q9BVC4 326 aa13.64□□□□□ -0.23
RBFOX1-211ENST00000548749 PHLDA3Q9Y5J5 127 aa13.64□□□□□ -0.23
RBFOX1-211ENST00000548749 MGST1P10620 155 aaKnown RBP13.63□□□□□ -0.23
RBFOX1-211ENST00000548749 MEF2BQ02080 365 aaPredicted RBP13.63□□□□□ -0.23
RBFOX1-211ENST00000548749 SH2D6Q7Z4S9 175 aa13.63□□□□□ -0.23
RBFOX1-211ENST00000548749 ZNF575Q86XF7 245 aa13.63□□□□□ -0.23
RBFOX1-211ENST00000548749 M0R381 172 aa13.62□□□□□ -0.23
RBFOX1-211ENST00000548749 BCL2P10415 239 aa13.62□□□□□ -0.23
RBFOX1-211ENST00000548749 NKX2-5P52952 324 aaPredicted RBP13.62□□□□□ -0.23
RBFOX1-211ENST00000548749 TNP2Q05952 138 aa13.62□□□□□ -0.23
RBFOX1-211ENST00000548749 CENPWQ5EE01 88 aa13.62□□□□□ -0.23
RBFOX1-211ENST00000548749 ALKAL2Q6UX46 152 aa13.62□□□□□ -0.23
RBFOX1-211ENST00000548749 ZFP2Q6ZN57 461 aa13.62□□□□□ -0.23
RBFOX1-211ENST00000548749 SAMD10Q9BYL1 202 aa13.62□□□□□ -0.23
RBFOX1-211ENST00000548749 Q6ZSN1 163 aa13.61□□□□□ -0.23
RBFOX1-211ENST00000548749 WFDC10BQ8IUB3 73 aa13.61□□□□□ -0.23
RBFOX1-211ENST00000548749 SCRT2Q9NQ03 307 aa13.61□□□□□ -0.23
RBFOX1-211ENST00000548749 PDE6DO43924 150 aa13.6□□□□□ -0.23
RBFOX1-211ENST00000548749 FAM74A4Q5TZK3 123 aa13.6□□□□□ -0.23
RBFOX1-211ENST00000548749 ZFP82Q8N141 532 aa13.6□□□□□ -0.23
RBFOX1-211ENST00000548749 MED9Q9NWA0 146 aa13.6□□□□□ -0.23
RBFOX1-211ENST00000548749 VAX2Q9UIW0 290 aa13.6□□□□□ -0.23
RBFOX1-211ENST00000548749 RAB19A4D1S5 217 aa13.59□□□□□ -0.23
RBFOX1-211ENST00000548749 LY96Q9Y6Y9 160 aa13.59□□□□□ -0.23
RBFOX1-211ENST00000548749 A0A087WWL8 130 aa13.58□□□□□ -0.24
RBFOX1-211ENST00000548749 RHODO00212 210 aa13.58□□□□□ -0.24
RBFOX1-211ENST00000548749 GNG4P50150 75 aa13.58□□□□□ -0.24
RBFOX1-211ENST00000548749 LINC00315P59091 139 aa13.58□□□□□ -0.24
RBFOX1-211ENST00000548749 UFSP1Q6NVU6 142 aa13.58□□□□□ -0.24
RBFOX1-211ENST00000548749 SFRP2Q96HF1 295 aa13.58□□□□□ -0.24
RBFOX1-211ENST00000548749 GAGE12JA6NER3 117 aa13.57□□□□□ -0.24
RBFOX1-211ENST00000548749 MED14OSP0DP75 135 aa13.57□□□□□ -0.24
RBFOX1-211ENST00000548749 TAGLN2P37802 199 aaKnown RBP13.57□□□□□ -0.24
RBFOX1-211ENST00000548749 BLOC1S1P78537 153 aa13.57□□□□□ -0.24
RBFOX1-211ENST00000548749 GAGE1Q13065 139 aa13.57□□□□□ -0.24
RBFOX1-211ENST00000548749 GAGE4Q13068 117 aa13.57□□□□□ -0.24
RBFOX1-211ENST00000548749 GAGE5Q13069 117 aa13.57□□□□□ -0.24
RBFOX1-211ENST00000548749 GAGE13Q4V321 117 aa13.57□□□□□ -0.24
RBFOX1-211ENST00000548749 BOLA1Q9Y3E2 137 aa13.57□□□□□ -0.24
RBFOX1-211ENST00000548749 TRAV9-2A0A087WT02 112 aa13.56□□□□□ -0.24
RBFOX1-211ENST00000548749 IGLV2-8P01709 118 aa13.56□□□□□ -0.24
RBFOX1-211ENST00000548749 CXCL1P09341 107 aa13.56□□□□□ -0.24
RBFOX1-211ENST00000548749 TIRAPP58753 221 aa13.56□□□□□ -0.24
RBFOX1-211ENST00000548749 C14orf178Q8N769 122 aaPredicted RBP13.56□□□□□ -0.24
RBFOX1-211ENST00000548749 OR10AG1Q8NH19 301 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms