RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 INO80EQ8NBZ0 244 aaPredicted RBP7.94□□□□□ -1.14
TRAFD1-205ENST00000548277 ASB13Q8WXK3 278 aa7.94□□□□□ -1.14
TRAFD1-205ENST00000548277 PRADC1Q9BSG0 188 aa7.94□□□□□ -1.14
TRAFD1-205ENST00000548277 NDFIP1Q9BT67 221 aa7.94□□□□□ -1.14
TRAFD1-205ENST00000548277 ACTR3CQ9C0K3 210 aaPredicted RBP7.94□□□□□ -1.14
TRAFD1-205ENST00000548277 TMEM167BQ9NRX6 74 aa7.94□□□□□ -1.14
TRAFD1-205ENST00000548277 TNFSF18Q9UNG2 199 aa7.94□□□□□ -1.14
TRAFD1-205ENST00000548277 PSG8Q9UQ74 426 aa7.94□□□□□ -1.14
TRAFD1-205ENST00000548277 SRRM2Q9UQ35 2752 aaKnown RBP7.94□□□□□ -1.14
TRAFD1-205ENST00000548277 FXYD6-FXYD2A0A087WZ82 144 aa7.93□□□□□ -1.14
TRAFD1-205ENST00000548277 CXorf1O96002 111 aa7.93□□□□□ -1.14
TRAFD1-205ENST00000548277 GCGP01275 180 aa7.93□□□□□ -1.14
TRAFD1-205ENST00000548277 ZNF876PQ49A33 203 aa7.93□□□□□ -1.14
TRAFD1-205ENST00000548277 RPL7L1Q6DKI1 246 aaKnown RBP7.93□□□□□ -1.14
TRAFD1-205ENST00000548277 DPPA3Q6W0C5 159 aa7.93□□□□□ -1.14
TRAFD1-205ENST00000548277 PRNTQ86SH4 94 aa7.93□□□□□ -1.14
TRAFD1-205ENST00000548277 C11orf21Q9P2W6 132 aa7.93□□□□□ -1.14
TRAFD1-205ENST00000548277 EPDR1Q9UM22 224 aa7.93□□□□□ -1.14
TRAFD1-205ENST00000548277 DNAH8Q96JB1 4490 aa7.93□□□□□ -1.14
TRAFD1-205ENST00000548277 RNF222A6NCQ9 220 aa7.92□□□□□ -1.14
TRAFD1-205ENST00000548277 KRTAP29-1A8MX34 341 aaPredicted RBP7.92□□□□□ -1.14
TRAFD1-205ENST00000548277 GGTLC3B5MD39 225 aa7.92□□□□□ -1.14
TRAFD1-205ENST00000548277 TAAR5O14804 337 aa7.92□□□□□ -1.14
TRAFD1-205ENST00000548277 IGLV2-11P01706 119 aa7.92□□□□□ -1.14
TRAFD1-205ENST00000548277 TIRAPP58753 221 aa7.92□□□□□ -1.14
TRAFD1-205ENST00000548277 FLI1Q01543 452 aaPredicted RBP7.92□□□□□ -1.14
TRAFD1-205ENST00000548277 LELP1Q5T871 98 aa7.92□□□□□ -1.14
TRAFD1-205ENST00000548277 ATP6V0E2Q8NHE4 81 aa7.92□□□□□ -1.14
TRAFD1-205ENST00000548277 BAALCQ8WXS3 180 aa7.92□□□□□ -1.14
TRAFD1-205ENST00000548277 BORCS7-ASMTA0A0B4J1R7 106 aa7.91□□□□□ -1.14
TRAFD1-205ENST00000548277 PGPEP1LA6NFU8 196 aa7.91□□□□□ -1.14
TRAFD1-205ENST00000548277 RS1O15537 224 aa7.91□□□□□ -1.14
TRAFD1-205ENST00000548277 RHOHQ15669 191 aa7.91□□□□□ -1.14
TRAFD1-205ENST00000548277 SMUG1Q53HV7 270 aa7.91□□□□□ -1.14
TRAFD1-205ENST00000548277 CFAP126Q5VTH2 177 aa7.91□□□□□ -1.14
TRAFD1-205ENST00000548277 DAZ4Q86SG3 579 aaKnown RBP7.91□□□□□ -1.14
TRAFD1-205ENST00000548277 CYB561D1Q8N8Q1 229 aa7.91□□□□□ -1.14
TRAFD1-205ENST00000548277 TMEM75Q8N9X5 138 aa7.91□□□□□ -1.14
TRAFD1-205ENST00000548277 OR2T35Q8NGX2 323 aa7.91□□□□□ -1.14
TRAFD1-205ENST00000548277 DEFB104AQ8WTQ1 72 aa7.91□□□□□ -1.14
TRAFD1-205ENST00000548277 TM2D2Q9BX73 214 aa7.91□□□□□ -1.14
TRAFD1-205ENST00000548277 GTSF1LQ9H1H1 148 aa7.91□□□□□ -1.14
TRAFD1-205ENST00000548277 DAZ3Q9NR90 486 aaKnown RBP7.91□□□□□ -1.14
TRAFD1-205ENST00000548277 TRAV34A0A0B4J273 112 aa7.9□□□□□ -1.14
TRAFD1-205ENST00000548277 A0A1W2PRE2 83 aa7.9□□□□□ -1.14
TRAFD1-205ENST00000548277 GAGE12JA6NER3 117 aa7.9□□□□□ -1.14
TRAFD1-205ENST00000548277 GAGE1Q13065 139 aa7.9□□□□□ -1.14
TRAFD1-205ENST00000548277 GAGE4Q13068 117 aa7.9□□□□□ -1.14
TRAFD1-205ENST00000548277 GAGE5Q13069 117 aa7.9□□□□□ -1.14
TRAFD1-205ENST00000548277 ZNF726P1Q15940 193 aa7.9□□□□□ -1.14
TRAFD1-205ENST00000548277 ZFP69Q49AA0 526 aa7.9□□□□□ -1.14
TRAFD1-205ENST00000548277 GAGE13Q4V321 117 aa7.9□□□□□ -1.14
TRAFD1-205ENST00000548277 LINC00479Q96M42 142 aa7.9□□□□□ -1.14
TRAFD1-205ENST00000548277 CTXND1A0A1B0GTU2 59 aa7.89□□□□□ -1.15
TRAFD1-205ENST00000548277 TRBV6-4A0A1B0GX49 114 aa7.89□□□□□ -1.15
TRAFD1-205ENST00000548277 IFNA7P01567 189 aa7.89□□□□□ -1.15
TRAFD1-205ENST00000548277 C1QBP02746 253 aa7.89□□□□□ -1.15
TRAFD1-205ENST00000548277 UBE2G2P60604 165 aa7.89□□□□□ -1.15
TRAFD1-205ENST00000548277 SAPCD1Q5SSQ6 148 aa7.89□□□□□ -1.15
TRAFD1-205ENST00000548277 C9orf85Q96MD7 179 aa7.89□□□□□ -1.15
TRAFD1-205ENST00000548277 RBFOX3A6NFN3 312 aa7.88□□□□□ -1.15
TRAFD1-205ENST00000548277 FGF8P55075 233 aaPredicted RBP7.88□□□□□ -1.15
TRAFD1-205ENST00000548277 ZNF506Q5JVG8 444 aa7.88□□□□□ -1.15
TRAFD1-205ENST00000548277 AKR1C8PQ5T2L2 129 aa7.88□□□□□ -1.15
TRAFD1-205ENST00000548277 Q6ZSA8 131 aa7.88□□□□□ -1.15
TRAFD1-205ENST00000548277 SCXQ7RTU7 201 aa7.88□□□□□ -1.15
TRAFD1-205ENST00000548277 DNAJC30Q96LL9 226 aa7.88□□□□□ -1.15
TRAFD1-205ENST00000548277 Q9UF83 564 aa7.88□□□□□ -1.15
TRAFD1-205ENST00000548277 G3V3Q6 166 aa7.87□□□□□ -1.15
TRAFD1-205ENST00000548277 CIDEAO60543 219 aa7.87□□□□□ -1.15
TRAFD1-205ENST00000548277 RNASE3P12724 160 aaKnown RBP7.87□□□□□ -1.15
TRAFD1-205ENST00000548277 SYT8Q8NBV8 401 aa7.87□□□□□ -1.15
TRAFD1-205ENST00000548277 SAMD10Q9BYL1 202 aa7.87□□□□□ -1.15
TRAFD1-205ENST00000548277 ARL2-SNX15V9GYD0 113 aa7.87□□□□□ -1.15
TRAFD1-205ENST00000548277 IGKV2D-24A0A075B6R9 120 aa7.86□□□□□ -1.15
TRAFD1-205ENST00000548277 TRAV8-3A0A0A6YYJ7 113 aa7.86□□□□□ -1.15
TRAFD1-205ENST00000548277 IGKV3D-20A0A0C4DH25 116 aa7.86□□□□□ -1.15
TRAFD1-205ENST00000548277 FAM74A7A6NL05 159 aa7.86□□□□□ -1.15
TRAFD1-205ENST00000548277 FABP5P3A8MUU1 101 aa7.86□□□□□ -1.15
TRAFD1-205ENST00000548277 PEX7O00628 323 aa7.86□□□□□ -1.15
TRAFD1-205ENST00000548277 ARPC5O15511 151 aa7.86□□□□□ -1.15
TRAFD1-205ENST00000548277 MGST1P10620 155 aaKnown RBP7.86□□□□□ -1.15
TRAFD1-205ENST00000548277 S100A4P26447 101 aaKnown RBP7.86□□□□□ -1.15
TRAFD1-205ENST00000548277 LAGE3Q14657 143 aa7.86□□□□□ -1.15
TRAFD1-205ENST00000548277 RGS21Q2M5E4 152 aa7.86□□□□□ -1.15
TRAFD1-205ENST00000548277 LGALSLQ3ZCW2 172 aaPredicted RBP7.86□□□□□ -1.15
TRAFD1-205ENST00000548277 SERTAD4-AS1Q5TG53 156 aa7.86□□□□□ -1.15
TRAFD1-205ENST00000548277 PTH2Q96A98 100 aa7.86□□□□□ -1.15
TRAFD1-205ENST00000548277 NKX6-2Q9C056 277 aaPredicted RBP7.86□□□□□ -1.15
TRAFD1-205ENST00000548277 JPT2Q9H910 190 aa7.86□□□□□ -1.15
TRAFD1-205ENST00000548277 CYTL1Q9NRR1 136 aa7.86□□□□□ -1.15
TRAFD1-205ENST00000548277 BOLA1Q9Y3E2 137 aa7.86□□□□□ -1.15
TRAFD1-205ENST00000548277 MAP1LC3B2A6NCE7 125 aa7.85□□□□□ -1.15
TRAFD1-205ENST00000548277 SMLR1H3BR10 107 aa7.85□□□□□ -1.15
TRAFD1-205ENST00000548277 IGLV2-8P01709 118 aa7.85□□□□□ -1.15
TRAFD1-205ENST00000548277 Q86TA4 180 aa7.85□□□□□ -1.15
TRAFD1-205ENST00000548277 HIST1H2BAQ96A08 127 aa7.85□□□□□ -1.15
TRAFD1-205ENST00000548277 MAP1LC3BQ9GZQ8 125 aa7.85□□□□□ -1.15
TRAFD1-205ENST00000548277 LRP1Q07954 4544 aaKnown RBP7.84□□□□□ -1.15
TRAFD1-205ENST00000548277 ASIPP42127 132 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms